RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 PRELID3AQ96N28 172 aa4.58□□□□□ -1.68
LINC02539-202ENST00000419220 GNB1LQ9BYB4 327 aa4.58□□□□□ -1.68
LINC02539-202ENST00000419220 MAP1LC3AQ9H492 121 aa4.58□□□□□ -1.68
LINC02539-202ENST00000419220 TRBV27A0A0K0K1C4 114 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 A0A1B0GXF2 115 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 D6R8Y8 96 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 CCL25O15444 150 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 ORMDL2Q53FV1 153 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 PAPPA-AS1Q5QFB9 102 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 RNASEKQ6P5S7 137 aaKnown RBP4.57□□□□□ -1.68
LINC02539-202ENST00000419220 TMEM70Q9BUB7 260 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 NXT2Q9NPJ8 142 aaKnown RBP4.57□□□□□ -1.68
LINC02539-202ENST00000419220 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 KLK12Q9UKR0 248 aa4.57□□□□□ -1.68
LINC02539-202ENST00000419220 ADCYAP1P18509 176 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 POLR2KP53803 58 aaKnown RBP4.56□□□□□ -1.68
LINC02539-202ENST00000419220 RAB5BP61020 215 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 GAGE6Q13070 117 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 CFAP161Q6P656 301 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 ATRAIDQ6UW56 229 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 OR5A1Q8NGJ0 315 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 PRSS3P2Q8NHM4 247 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 UBE2WQ96B02 151 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 RPL39LQ96EH5 51 aaKnown RBP4.56□□□□□ -1.68
LINC02539-202ENST00000419220 RNF185Q96GF1 192 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 Q9HAA7 133 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 KMT2AQ03164 3969 aa4.56□□□□□ -1.68
LINC02539-202ENST00000419220 KMT2CQ8NEZ4 4911 aaKnown RBP4.56□□□□□ -1.68
LINC02539-202ENST00000419220 DNAH1Q9P2D7 4330 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 IGKV2D-24A0A075B6R9 120 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 FABP9Q0Z7S8 132 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 SS18Q15532 418 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 Q8N976 141 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 SMIM2Q9BVW6 85 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 TRAPPC1Q9Y5R8 145 aa4.55□□□□□ -1.68
LINC02539-202ENST00000419220 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 PRSS47A8MTI9 375 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 FGF6P10767 208 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
LINC02539-202ENST00000419220 RBX1P62877 108 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 REG3AQ06141 175 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 Q6ZN92 141 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 LINC00269Q8N2A0 174 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 Q8N8P6 123 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 Q9UF83 564 aa4.54□□□□□ -1.68
LINC02539-202ENST00000419220 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
LINC02539-202ENST00000419220 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 C1orf196B1AJZ1 125 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 SMKR1H3BMG3 65 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 MPV17L2Q567V2 206 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 NTM-AS1Q6ZSK4 140 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 FA2HQ7L5A8 372 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 MRPL52Q86TS9 123 aaKnown RBP4.53□□□□□ -1.68
LINC02539-202ENST00000419220 ZNF664Q8N3J9 261 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 NRACQ8N912 160 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 NTN5Q8WTR8 489 aaPredicted RBP4.53□□□□□ -1.68
LINC02539-202ENST00000419220 TIMM21Q9BVV7 248 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 SPANXA1Q9NS26 97 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 CYSLTR1Q9Y271 337 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 PKIGQ9Y2B9 76 aa4.53□□□□□ -1.68
LINC02539-202ENST00000419220 SACSQ9NZJ4 4579 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.52□□□□□ -1.69
LINC02539-202ENST00000419220 IGKV2-29A2NJV5 120 aaPredicted RBP4.52□□□□□ -1.69
LINC02539-202ENST00000419220 RTL8CO15255 209 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 TSHBP01222 138 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 NPYP01303 97 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 ESDP10768 282 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 RPS10P46783 165 aaKnown RBP4.52□□□□□ -1.69
LINC02539-202ENST00000419220 SEC11AP67812 179 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 SLC7A5P1Q8MH63 180 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 C20orf203Q8NBC4 194 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 C2orf88Q9BSF0 95 aa4.52□□□□□ -1.69
LINC02539-202ENST00000419220 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.51□□□□□ -1.69
LINC02539-202ENST00000419220 APOMO95445 188 aa4.51□□□□□ -1.69
LINC02539-202ENST00000419220 S100A1P23297 94 aa4.51□□□□□ -1.69
LINC02539-202ENST00000419220 PRR34Q9NV39 138 aa4.51□□□□□ -1.69
LINC02539-202ENST00000419220 PYGO1Q9Y3Y4 419 aa4.51□□□□□ -1.69
LINC02539-202ENST00000419220 HYDINQ4G0P3 5121 aa4.51□□□□□ -1.69
LINC02539-202ENST00000419220 A0A087WTM6 91 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 IGKV3OR2-268A0A0C4DH90 116 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 MRPS36P82909 103 aaKnown RBP4.5□□□□□ -1.69
LINC02539-202ENST00000419220 TEX43Q6ZNM6 134 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 TMEM141Q96I45 108 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 ALKBH7Q9BT30 221 aaPredicted RBP4.5□□□□□ -1.69
LINC02539-202ENST00000419220 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 VCX2Q9H322 139 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 CDC42SE2Q9NRR3 84 aa4.5□□□□□ -1.69
LINC02539-202ENST00000419220 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 IGLV5-52A0A0A0MRZ9 124 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 TGIF2-C20orf24A0A0A6YYL0 155 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 C16orf90A8MZG2 172 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 LINC00614P0C842 121 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 KIAA1644Q3SXP7 199 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 ENHOQ6UWT2 76 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 C2orf66Q6UXQ4 117 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 SPATA12Q7Z6I5 190 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 DEFB104AQ8WTQ1 72 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 UBE2D4Q9Y2X8 147 aa4.49□□□□□ -1.69
LINC02539-202ENST00000419220 RYR2Q92736 4967 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms