RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 C11orf45Q8TAV5 145 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 TIMM17AQ99595 171 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
HLA-DMB-258ENST00000418107 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
HLA-DMB-258ENST00000418107 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
HLA-DMB-258ENST00000418107 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
HLA-DMB-258ENST00000418107 DNAH11Q96DT5 4516 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 TRBV25-1A0A075B6N4 114 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 A0A087WX48 190 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 A0A096LPF7 62 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 PCP4L1A6NKN8 68 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 PAPPA-AS1Q5QFB9 102 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 GTSF1LQ9H1H1 148 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 CHTOPQ9Y3Y2 248 aaKnown RBP9.17□□□□□ -0.94
HLA-DMB-258ENST00000418107 DNAH17Q9UFH2 4485 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 TRAV9-2A0A087WT02 112 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 TRAV12-1A0A0B4J245 112 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 DPM2O94777 84 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 ODF1Q14990 250 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 PMVKQ15126 192 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 MRPL23Q16540 153 aaKnown RBP9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 SPATA45Q537H7 98 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 VSIG2Q96IQ7 327 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 OPRPNQ99935 248 aaPredicted RBP9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 VCX2Q9H322 139 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 PRO1933Q9H354 126 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 ICOSQ9Y6W8 199 aa9.16□□□□□ -0.94
HLA-DMB-258ENST00000418107 PRSS29PA6NIE9 313 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 TSTD3H0UI37 97 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 LINC00694P0DN24 101 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 Q6ZTC4 211 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 CHCHD5Q9BSY4 110 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.94
HLA-DMB-258ENST00000418107 IGKCP01834 107 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 PKIAP61925 76 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 GAGE6Q13070 117 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 ZC2HC1BQ5TFG8 222 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 SH2D6Q7Z4S9 175 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 ZNF664Q8N3J9 261 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 TMEM101Q96IK0 257 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 MRPL35Q9NZE8 188 aaKnown RBP9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 ABCA13Q86UQ4 5058 aa9.14□□□□□ -0.95
HLA-DMB-258ENST00000418107 IGLV4-3A0A075B6K6 122 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 DEFB131BA0A096LNP1 70 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 TRBV6-8A0A0A6YYG3 113 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 hDV102S1A0JD36 115 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 F8VRH5 84 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 FGF6P10767 208 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 MAJINQ3KP22 176 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 CST9LQ9H4G1 147 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 UBE2D4Q9Y2X8 147 aa9.13□□□□□ -0.95
HLA-DMB-258ENST00000418107 H7C423 109 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 NPSP0C0P6 89 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 PLNP26678 52 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 OR5A1Q8NGJ0 315 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 TMEM262E9PQX1 116 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 RNASE13Q5GAN3 156 aaKnown RBP9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 C2orf88Q9BSF0 95 aa9.12□□□□□ -0.95
HLA-DMB-258ENST00000418107 IGLL5B9A064 214 aa9.11□□□□□ -0.95
HLA-DMB-258ENST00000418107 Q6ZUT4 128 aa9.11□□□□□ -0.95
HLA-DMB-258ENST00000418107 APLNQ9ULZ1 77 aa9.11□□□□□ -0.95
HLA-DMB-258ENST00000418107 TRAV10A0A0B4J240 114 aa9.1□□□□□ -0.95
HLA-DMB-258ENST00000418107 TCTAP57738 103 aa9.1□□□□□ -0.95
HLA-DMB-258ENST00000418107 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
HLA-DMB-258ENST00000418107 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
HLA-DMB-258ENST00000418107 STPG4Q8N801 248 aa9.1□□□□□ -0.95
HLA-DMB-258ENST00000418107 H3BNG1 76 aa9.09□□□□□ -0.95
HLA-DMB-258ENST00000418107 ZNF25P17030 456 aaPredicted RBP9.09□□□□□ -0.95
HLA-DMB-258ENST00000418107 AMELXQ99217 191 aa9.09□□□□□ -0.95
HLA-DMB-258ENST00000418107 PKD1P98161 4303 aa9.08□□□□□ -0.96
HLA-DMB-258ENST00000418107 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
HLA-DMB-258ENST00000418107 A0A0J9YXV3 536 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 C11orf86A6NJI1 115 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 TMEM170BQ5T4T1 132 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 LINC00336Q6ZUF6 198 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
HLA-DMB-258ENST00000418107 IGLV4-69A0A075B6H9 119 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 NMUP48645 174 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 HERVK_113P61574 105 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 LELP1Q5T871 98 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 CDC42SE2Q9NRR3 84 aa9.06□□□□□ -0.96
HLA-DMB-258ENST00000418107 TRAV8-6A0A0B4J262 113 aa9.05□□□□□ -0.96
HLA-DMB-258ENST00000418107 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
HLA-DMB-258ENST00000418107 UQCR10Q9UDW1 63 aa9.05□□□□□ -0.96
HLA-DMB-258ENST00000418107 TRAV13-1A0A0B4J241 112 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 IGLC3P0DOY3 106 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 DDTP30046 118 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 SLC25A34Q6PIV7 304 aa9.04□□□□□ -0.96
HLA-DMB-258ENST00000418107 LYPD5Q6UWN5 251 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms