RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 MRPL18Q9H0U6 180 aaKnown RBP11.63□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 NXT2Q9NPJ8 142 aaKnown RBP11.63□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 FABP9Q0Z7S8 132 aa11.62□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 KRTAP26-1Q6PEX3 210 aa11.62□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 OR5A1Q8NGJ0 315 aa11.62□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 CDC42SE2Q9NRR3 84 aa11.62□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 UBE2D4Q9Y2X8 147 aa11.62□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 DNAH5Q8TE73 4624 aa11.62□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 LOC389332A0A1B0GUA5 103 aa11.61□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 TRAPPC1Q9Y5R8 145 aa11.61□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 CLPSL2Q6UWE3 100 aa11.6□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 ZNF664Q8N3J9 261 aa11.6□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 DGAT2L7PQ6IED9 249 aa11.59□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
COMMD3-BMI1-201ENST00000417470 IFI27P40305 119 aaPredicted RBP11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 CBLN2Q8IUK8 224 aa11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 Q8N814 137 aa11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 SPANXA1Q9NS26 97 aa11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 PYGO1Q9Y3Y4 419 aa11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 LRP1BQ9NZR2 4599 aa11.58□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 LINC01546A6NGU7 62 aa11.57□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 G0S2P27469 103 aa11.57□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 KRTAP10-2P60368 255 aa11.57□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 BAALCQ8WXS3 180 aa11.57□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 CCL25O15444 150 aa11.56□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 NTN5Q8WTR8 489 aaPredicted RBP11.56□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 WFDC2Q14508 124 aa11.55□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 PRSS3P2Q8NHM4 247 aa11.55□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 FAM104AQ969W3 186 aa11.55□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 NPSP0C0P6 89 aa11.54□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 CYSLTR1Q9Y271 337 aa11.54□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 C2orf66Q6UXQ4 117 aa11.53□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 CHCHD10Q8WYQ3 142 aaPredicted RBP11.53□□□□□ -0.56
COMMD3-BMI1-201ENST00000417470 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 C16orf90A8MZG2 172 aa11.52□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 SS18Q15532 418 aa11.52□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 Q6ZUT4 128 aa11.52□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 C18orf32Q8TCD1 76 aa11.52□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 C1orf196B1AJZ1 125 aa11.51□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 GAGE12HA6NDE8 117 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 IGIPA6NJ69 53 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 COLCA2A8K830 154 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 LECT2O14960 151 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 TOMM6Q96B49 74 aa11.5□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 FOXI1Q12951 378 aa11.49□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 LINC00614P0C842 121 aa11.48□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 CFAP161Q6P656 301 aa11.48□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 TMEM141Q96I45 108 aa11.48□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 TIMM17AQ99595 171 aa11.48□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 OPRPNQ99935 248 aaPredicted RBP11.48□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 IGLV5-52A0A0A0MRZ9 124 aa11.47□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 RAB5BP61020 215 aa11.47□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 RNASE13Q5GAN3 156 aaKnown RBP11.47□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 URB1-AS1Q96HZ7 61 aa11.47□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 AP5S1Q9NUS5 200 aa11.47□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 XCL1P47992 114 aa11.46□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 ERASQ7Z444 233 aa11.46□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 AMELXQ99217 191 aa11.46□□□□□ -0.57
COMMD3-BMI1-201ENST00000417470 KIAA1109Q2LD37 5005 aa11.45□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 TRGC2P03986 189 aa11.45□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 PRSS1P07477 247 aa11.45□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 GCSHP23434 173 aa11.45□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 TEX43Q6ZNM6 134 aa11.45□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 DNAH8Q96JB1 4490 aa11.45□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 Q6ZN92 141 aa11.44□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 VCX2Q9H322 139 aa11.44□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 APOBP04114 4563 aaKnown RBP11.44□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.43□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 IFITM10A6NMD0 228 aa11.43□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 C15orf56Q8N910 161 aa11.43□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 SCGB3A1Q96QR1 104 aa11.43□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 RYR1P21817 5038 aa11.42□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 S100A1P23297 94 aa11.42□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 LINC00173Q6ZV60 143 aa11.42□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 FAM19A3Q7Z5A8 133 aa11.42□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 CHCHD1Q96BP2 118 aaKnown RBP11.42□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 A0A096LNJ9 63 aa11.41□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 GVQW2A0A096LPI5 108 aaPredicted RBP11.41□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 IGHV3OR16-9A0A0B4J2B5 98 aa11.41□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 IGHV1-58A0A0C4DH39 117 aa11.41□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 SCO1O75880 301 aa11.41□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 UBE2D1P51668 147 aa11.41□□□□□ -0.58
COMMD3-BMI1-201ENST00000417470 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms