RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 UMAD1C9J7I0 102 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 IFNA1P01562 189 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 CCL20P78556 96 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 TWIST1Q15672 202 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 SPINK6Q6UWN8 80 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 PGLYRP4Q96LB8 373 aa4.5□□□□□ -1.69
CASP4-202ENST00000417440 C19orf71A6NCJ1 209 aa4.49□□□□□ -1.69
CASP4-202ENST00000417440 F2Z2F3 143 aa4.49□□□□□ -1.69
CASP4-202ENST00000417440 APCSP02743 223 aa4.49□□□□□ -1.69
CASP4-202ENST00000417440 GNG4P50150 75 aa4.49□□□□□ -1.69
CASP4-202ENST00000417440 GATD1Q8NB37 220 aa4.49□□□□□ -1.69
CASP4-202ENST00000417440 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
CASP4-202ENST00000417440 GVQW2A0A096LPI5 108 aaPredicted RBP4.48□□□□□ -1.69
CASP4-202ENST00000417440 KANTRA0A1W2PQU2 76 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 CCL25O15444 150 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 FGF6P10767 208 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 PMCHP20382 165 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 FOXA3P55318 350 aaPredicted RBP4.48□□□□□ -1.69
CASP4-202ENST00000417440 GAGE2BQ13066 116 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 Q6ZRP5 223 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 TMEM101Q96IK0 257 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 CARD19Q96LW7 228 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 MANBALQ9NQG1 85 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 MED9Q9NWA0 146 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 LINC00474Q9P2X8 69 aa4.48□□□□□ -1.69
CASP4-202ENST00000417440 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
CASP4-202ENST00000417440 SRSF9Q13242 221 aaKnown RBP eCLIP4.47□□□□□ -1.69
CASP4-202ENST00000417440 C9orf62Q8N4C0 152 aa4.47□□□□□ -1.69
CASP4-202ENST00000417440 OR5A1Q8NGJ0 315 aa4.47□□□□□ -1.69
CASP4-202ENST00000417440 C11orf52Q96A22 123 aa4.47□□□□□ -1.69
CASP4-202ENST00000417440 BTF3L4Q96K17 158 aa4.47□□□□□ -1.69
CASP4-202ENST00000417440 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
CASP4-202ENST00000417440 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
CASP4-202ENST00000417440 BCL2L11O43521 198 aa4.46□□□□□ -1.7
CASP4-202ENST00000417440 SYCNQ0VAF6 134 aa4.46□□□□□ -1.7
CASP4-202ENST00000417440 SMIM15Q7Z3B0 74 aa4.46□□□□□ -1.7
CASP4-202ENST00000417440 RNASE7Q9H1E1 156 aaKnown RBP4.46□□□□□ -1.7
CASP4-202ENST00000417440 TRBV20OR9-2A0A075B6H5 130 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 A0A1W2PNN7 141 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 H7C423 109 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 PDE6DO43924 150 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 NCR2O95944 276 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 MT-ND6P03923 174 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 BCL2P10415 239 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 CTRLP40313 264 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 EIF5AP63241 154 aaKnown RBP4.45□□□□□ -1.7
CASP4-202ENST00000417440 ZNF345Q14585 488 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 SS18Q15532 418 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 RPP21Q9H633 154 aaKnown RBP4.45□□□□□ -1.7
CASP4-202ENST00000417440 BIN3Q9NQY0 253 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 PKIGQ9Y2B9 76 aa4.45□□□□□ -1.7
CASP4-202ENST00000417440 IGLV4-69A0A075B6H9 119 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 LOC107984640A0A0U1RRK4 108 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 FAM231BA6NCW3 169 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 TEX46H3BTG2 121 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 I3L3M4 83 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 ZNF25P17030 456 aaPredicted RBP4.44□□□□□ -1.7
CASP4-202ENST00000417440 CAMPP49913 170 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 MEF2BQ02080 365 aaPredicted RBP4.44□□□□□ -1.7
CASP4-202ENST00000417440 RGS21Q2M5E4 152 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 C1orf137Q5JT78 98 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
CASP4-202ENST00000417440 SMIM12Q96EX1 92 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 TMEM242Q9NWH2 141 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 LPAP08519 4548 aa4.44□□□□□ -1.7
CASP4-202ENST00000417440 HMSDA8MTL9 139 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 K7EN84 100 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 TSHBP01222 138 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 RPL18AQ02543 176 aaKnown RBP4.43□□□□□ -1.7
CASP4-202ENST00000417440 C9orf116Q5BN46 136 aaPredicted RBP4.43□□□□□ -1.7
CASP4-202ENST00000417440 RNASE13Q5GAN3 156 aaKnown RBP4.43□□□□□ -1.7
CASP4-202ENST00000417440 EIF5AL1Q6IS14 154 aaKnown RBP4.43□□□□□ -1.7
CASP4-202ENST00000417440 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 ZNF664Q8N3J9 261 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 OCC1Q8TAD7 63 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 ISOC2Q96AB3 205 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 MRAP2Q96G30 205 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 CAMK2N2Q96S95 79 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 OPRPNQ99935 248 aaPredicted RBP4.43□□□□□ -1.7
CASP4-202ENST00000417440 ST20Q9HBF5 79 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 BATF3Q9NR55 127 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 CDC42SE2Q9NRR3 84 aa4.43□□□□□ -1.7
CASP4-202ENST00000417440 TRAV1-1A0A0B4J248 108 aa4.42□□□□□ -1.7
CASP4-202ENST00000417440 GATCO43716 136 aaKnown RBP4.42□□□□□ -1.7
CASP4-202ENST00000417440 ESDP10768 282 aa4.42□□□□□ -1.7
CASP4-202ENST00000417440 TEX261Q6UWH6 196 aa4.42□□□□□ -1.7
CASP4-202ENST00000417440 C5orf38Q86SI9 138 aa4.42□□□□□ -1.7
CASP4-202ENST00000417440 CNFNQ9BYD5 112 aa4.42□□□□□ -1.7
CASP4-202ENST00000417440 CTDSP1Q9GZU7 261 aa4.42□□□□□ -1.7
CASP4-202ENST00000417440 TRAV13-1A0A0B4J241 112 aa4.41□□□□□ -1.7
CASP4-202ENST00000417440 COX7A2LO14548 114 aa4.41□□□□□ -1.7
CASP4-202ENST00000417440 APOMO95445 188 aa4.41□□□□□ -1.7
CASP4-202ENST00000417440 FCER1GP30273 86 aa4.41□□□□□ -1.7
CASP4-202ENST00000417440 CEBPGP53567 150 aa4.41□□□□□ -1.7
CASP4-202ENST00000417440 NUP35Q8NFH5 326 aa4.41□□□□□ -1.7
CASP4-202ENST00000417440 BORCS7Q96B45 105 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms