RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KRTAP10-2P60368 255 aa15.3■□□□□ 0.04
SMARCB1-205ENST00000417137 FABP9Q0Z7S8 132 aa15.3■□□□□ 0.04
SMARCB1-205ENST00000417137 CDPF1Q6NVV7 123 aa15.3■□□□□ 0.04
SMARCB1-205ENST00000417137 Q8N8P6 123 aa15.3■□□□□ 0.04
SMARCB1-205ENST00000417137 Q8N814 137 aa15.29■□□□□ 0.04
SMARCB1-205ENST00000417137 TIMM21Q9BVV7 248 aa15.29■□□□□ 0.04
SMARCB1-205ENST00000417137 MRPL18Q9H0U6 180 aaKnown RBP15.29■□□□□ 0.04
SMARCB1-205ENST00000417137 NXT2Q9NPJ8 142 aaKnown RBP15.29■□□□□ 0.04
SMARCB1-205ENST00000417137 IGLV10-54A0A075B6I4 117 aa15.28■□□□□ 0.04
SMARCB1-205ENST00000417137 IGKV3OR2-268A0A0C4DH90 116 aa15.28■□□□□ 0.04
SMARCB1-205ENST00000417137 K7EMI3 77 aa15.28■□□□□ 0.04
SMARCB1-205ENST00000417137 ZNF664Q8N3J9 261 aa15.28■□□□□ 0.04
SMARCB1-205ENST00000417137 CDC42SE2Q9NRR3 84 aa15.28■□□□□ 0.04
SMARCB1-205ENST00000417137 UBE2D4Q9Y2X8 147 aa15.28■□□□□ 0.04
SMARCB1-205ENST00000417137 NTN5Q8WTR8 489 aaPredicted RBP15.27■□□□□ 0.04
SMARCB1-205ENST00000417137 LECT2O14960 151 aa15.26■□□□□ 0.03
SMARCB1-205ENST00000417137 SMCO4Q9NRQ5 59 aa15.26■□□□□ 0.03
SMARCB1-205ENST00000417137 TRAPPC1Q9Y5R8 145 aa15.26■□□□□ 0.03
SMARCB1-205ENST00000417137 KIAA1109Q2LD37 5005 aa15.26■□□□□ 0.03
SMARCB1-205ENST00000417137 C14orf177Q52M58 125 aa15.25■□□□□ 0.03
SMARCB1-205ENST00000417137 ORMDL2Q53FV1 153 aa15.25■□□□□ 0.03
SMARCB1-205ENST00000417137 ALKBH7Q9BT30 221 aaPredicted RBP15.25■□□□□ 0.03
SMARCB1-205ENST00000417137 SPANXA1Q9NS26 97 aa15.25■□□□□ 0.03
SMARCB1-205ENST00000417137 RPL39P62891 51 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-205ENST00000417137 WFDC2Q14508 124 aa15.24■□□□□ 0.03
SMARCB1-205ENST00000417137 KRTAP26-1Q6PEX3 210 aa15.24■□□□□ 0.03
SMARCB1-205ENST00000417137 G0S2P27469 103 aa15.23■□□□□ 0.03
SMARCB1-205ENST00000417137 IFI27P40305 119 aaPredicted RBP15.23■□□□□ 0.03
SMARCB1-205ENST00000417137 PRSS3P2Q8NHM4 247 aa15.23■□□□□ 0.03
SMARCB1-205ENST00000417137 PKD1P98161 4303 aa15.23■□□□□ 0.03
SMARCB1-205ENST00000417137 IGLV5-52A0A0A0MRZ9 124 aa15.22■□□□□ 0.03
SMARCB1-205ENST00000417137 SS18Q15532 418 aa15.22■□□□□ 0.03
SMARCB1-205ENST00000417137 LINC00959A0A1B0GUT2 108 aa15.21■□□□□ 0.03
SMARCB1-205ENST00000417137 CCL25O15444 150 aa15.21■□□□□ 0.03
SMARCB1-205ENST00000417137 CHCHD10Q8WYQ3 142 aaPredicted RBP15.21■□□□□ 0.03
SMARCB1-205ENST00000417137 GAGE12HA6NDE8 117 aa15.2■□□□□ 0.02
SMARCB1-205ENST00000417137 USP17L23D6RBM5 183 aa15.2■□□□□ 0.02
SMARCB1-205ENST00000417137 YPEL4Q96NS1 127 aa15.2■□□□□ 0.02
SMARCB1-205ENST00000417137 CYSLTR1Q9Y271 337 aa15.2■□□□□ 0.02
SMARCB1-205ENST00000417137 FUSP35637 526 aaKnown RBP eCLIP15.19■□□□□ 0.02
SMARCB1-205ENST00000417137 MRPS36P82909 103 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-205ENST00000417137 CBLN2Q8IUK8 224 aa15.19■□□□□ 0.02
SMARCB1-205ENST00000417137 PYGO1Q9Y3Y4 419 aa15.19■□□□□ 0.02
SMARCB1-205ENST00000417137 C1orf196B1AJZ1 125 aa15.18■□□□□ 0.02
SMARCB1-205ENST00000417137 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.17■□□□□ 0.02
SMARCB1-205ENST00000417137 GCSHP23434 173 aa15.17■□□□□ 0.02
SMARCB1-205ENST00000417137 CFAP161Q6P656 301 aa15.17■□□□□ 0.02
SMARCB1-205ENST00000417137 C2orf66Q6UXQ4 117 aa15.17■□□□□ 0.02
SMARCB1-205ENST00000417137 Q6ZUT4 128 aa15.17■□□□□ 0.02
SMARCB1-205ENST00000417137 XCL1P47992 114 aa15.16■□□□□ 0.02
SMARCB1-205ENST00000417137 RNASE13Q5GAN3 156 aaKnown RBP15.16■□□□□ 0.02
SMARCB1-205ENST00000417137 FA2HQ7L5A8 372 aa15.15■□□□□ 0.02
SMARCB1-205ENST00000417137 TRAV13-1A0A0B4J241 112 aa15.14■□□□□ 0.01
SMARCB1-205ENST00000417137 CD164L2Q6UWJ8 174 aa15.14■□□□□ 0.01
SMARCB1-205ENST00000417137 DNAH11Q96DT5 4516 aa15.14■□□□□ 0.01
SMARCB1-205ENST00000417137 RYR1P21817 5038 aa15.14■□□□□ 0.01
SMARCB1-205ENST00000417137 LINC01549A6NIU2 74 aa15.13■□□□□ 0.01
SMARCB1-205ENST00000417137 NPSP0C0P6 89 aa15.13■□□□□ 0.01
SMARCB1-205ENST00000417137 FOXI1Q12951 378 aa15.13■□□□□ 0.01
SMARCB1-205ENST00000417137 OPRPNQ99935 248 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-205ENST00000417137 LINC01546A6NGU7 62 aa15.12■□□□□ 0.01
SMARCB1-205ENST00000417137 TMEM141Q96I45 108 aa15.12■□□□□ 0.01
SMARCB1-205ENST00000417137 PKHD1P08F94 4074 aa15.12■□□□□ 0.01
SMARCB1-205ENST00000417137 PRSS1P07477 247 aa15.11■□□□□ 0.01
SMARCB1-205ENST00000417137 Q6ZN92 141 aa15.11■□□□□ 0.01
SMARCB1-205ENST00000417137 FAM104AQ969W3 186 aa15.11■□□□□ 0.01
SMARCB1-205ENST00000417137 IGLV4-3A0A075B6K6 122 aa15.1■□□□□ 0.01
SMARCB1-205ENST00000417137 hDV102S1A0JD36 115 aa15.1■□□□□ 0.01
SMARCB1-205ENST00000417137 PAPPA-AS1Q5QFB9 102 aa15.1■□□□□ 0.01
SMARCB1-205ENST00000417137 C18orf32Q8TCD1 76 aa15.1■□□□□ 0.01
SMARCB1-205ENST00000417137 TOMM6Q96B49 74 aa15.1■□□□□ 0.01
SMARCB1-205ENST00000417137 AP5S1Q9NUS5 200 aa15.1■□□□□ 0.01
SMARCB1-205ENST00000417137 IFITM10A6NMD0 228 aa15.09■□□□□ 0.01
SMARCB1-205ENST00000417137 RAB5BP61020 215 aa15.09■□□□□ 0.01
SMARCB1-205ENST00000417137 TEX43Q6ZNM6 134 aa15.09■□□□□ 0.01
SMARCB1-205ENST00000417137 IGIPA6NJ69 53 aa15.08■□□□□ 0
SMARCB1-205ENST00000417137 KRTAP10-1P60331 282 aa15.08■□□□□ 0
SMARCB1-205ENST00000417137 VCX2Q9H322 139 aa15.08■□□□□ 0
SMARCB1-205ENST00000417137 CDK2AP2O75956 126 aa15.07■□□□□ 0
SMARCB1-205ENST00000417137 LINC00614P0C842 121 aa15.07■□□□□ 0
SMARCB1-205ENST00000417137 TIMM17AQ99595 171 aa15.07■□□□□ 0
SMARCB1-205ENST00000417137 C2orf88Q9BSF0 95 aa15.07■□□□□ 0
SMARCB1-205ENST00000417137 IGHV1-58A0A0C4DH39 117 aa15.06■□□□□ 0
SMARCB1-205ENST00000417137 COX7A2LO14548 114 aa15.06■□□□□ 0
SMARCB1-205ENST00000417137 MALP21145 153 aa15.06■□□□□ 0
SMARCB1-205ENST00000417137 ERASQ7Z444 233 aa15.06■□□□□ 0
SMARCB1-205ENST00000417137 SCGB3A1Q96QR1 104 aa15.06■□□□□ 0
SMARCB1-205ENST00000417137 C15orf56Q8N910 161 aa15.05■□□□□ -0
SMARCB1-205ENST00000417137 DYNC1H1Q14204 4646 aaKnown RBP15.04■□□□□ -0
SMARCB1-205ENST00000417137 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.03■□□□□ -0
SMARCB1-205ENST00000417137 COLCA2A8K830 154 aa15.03■□□□□ -0
SMARCB1-205ENST00000417137 AMELXQ99217 191 aa15.03■□□□□ -0
SMARCB1-205ENST00000417137 GVQW2A0A096LPI5 108 aaPredicted RBP15.02■□□□□ -0
SMARCB1-205ENST00000417137 TRGC2P03986 189 aa15.02■□□□□ -0
SMARCB1-205ENST00000417137 CNBPP62633 177 aaKnown RBP15.02■□□□□ -0
SMARCB1-205ENST00000417137 APOMO95445 188 aa15.01□□□□□ -0.01
SMARCB1-205ENST00000417137 HIGD2BQ4VC39 106 aa15.01□□□□□ -0.01
SMARCB1-205ENST00000417137 C5orf38Q86SI9 138 aa15.01□□□□□ -0.01
SMARCB1-205ENST00000417137 C9orf163Q8N9P6 203 aa15□□□□□ -0.01
SMARCB1-205ENST00000417137 ZNF561-AS1K7EIQ3 104 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms