RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 Q8IZM0 81 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 BOD1L1Q8NFC6 3051 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPTSSBQ8NFR3 76 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 TSTD1Q8NFU3 115 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 PYDC1Q8WXC3 89 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 ANP32BQ92688 251 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 LSM10Q969L4 123 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 MAGOHBQ96A72 148 aaKnown RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 KIAA1551Q9HCM1 1747 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 SAR1AQ9NR31 198 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 BATF3Q9NR55 127 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPCS1Q9Y6A9 102 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 LINC00312Q9Y6C7 94 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 DNAH7Q8WXX0 4024 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 MYH1P12882 1939 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 MUC22E2RYF6 1773 aaPredicted RBP-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 C5orf42Q9H799 3197 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 LRP1BQ9NZR2 4599 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 DNAH3Q8TD57 4116 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 USH2AO75445 5202 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 PARP14Q460N5 1801 aa-0.17□□□□□ -2.44
TRAPPC13-203ENST00000415825 KDM5AP29375 1690 aaKnown RBP-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 COL4A6Q14031 1691 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 SLIT1O75093 1534 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 BPTFQ12830 3046 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 CEP152O94986 1710 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 RELNP78509 3460 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 TRBV10-3A0A0K0K1G6 114 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 LOC730098B7Z3J9 87 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 HCG22E2RYF7 251 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 APOC4-APOC2K7ER74 178 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 K7ERU9 68 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 YPEL1O60688 119 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 BCE1O60756 84 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 NCR2O95944 276 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 IL5P05113 134 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 HIST1H1DP16402 221 aaKnown RBP-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 CBLN1P23435 193 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 DEFB112Q30KQ8 113 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 SMIM21Q3B7S5 101 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 SCIMPQ6UWF3 145 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 MMGT1Q8N4V1 131 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 LINC00472Q9H8W2 130 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPANXA1Q9NS26 97 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 RPRMQ9NS64 109 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 CHD7Q9P2D1 2997 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 PRO0255Q9UI72 69 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPTAN1Q13813 2472 aaKnown RBP-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 KIAA0556O60303 1618 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 PAPPAQ13219 1627 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 HERC1Q15751 4861 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 STARD9Q9P2P6 4700 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 GAPVD1Q14C86 1478 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 A0A0C4DFX4 3053 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 USF3Q68DE3 2245 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 A0A0G2JMZ2 1700 aa-0.18□□□□□ -2.44
TRAPPC13-203ENST00000415825 SVEP1Q4LDE5 3571 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 TMEM2Q9UHN6 1383 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 AKAP11Q9UKA4 1901 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 FAT1Q14517 4588 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 RYR1P21817 5038 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 DAPK1P53355 1430 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 C10orf71Q711Q0 1435 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 CASKIN1Q8WXD9 1431 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 CELSR3Q9NYQ7 3312 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 RAPGEF6Q8TEU7 1601 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 FREM2Q5SZK8 3169 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 GOLGA4Q13439 2230 aaKnown RBP-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 CUBNO60494 3623 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 TRAV22A0A0B4J277 110 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 LOC100130705A0A1B0GUX0 176 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 C9orf92A6NGG3 77 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 K7EP34 96 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 K7EQZ3 153 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 NDUFA2O43678 99 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 NDUFB6O95139 128 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SIX6O95475 246 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 IFNGP01579 166 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 PIPP12273 146 aaPredicted RBP-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 COX6B1P14854 86 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPRR1AP35321 89 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 CCL18P55774 89 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 CCL8P80075 99 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 MT1HP80294 61 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPAG11BQ08648 103 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 KRTAP6-2Q3LI66 62 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 PIGYQ3MUY2 71 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 ZNF818PQ6ZRF7 136 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 UBE2DNLQ8IWF7 75 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 Q8N8P6 123 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPTSSAQ969W0 71 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SEC11CQ9BY50 192 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 FXYD6Q9H0Q3 95 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 SPANXCQ9NY87 97 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 PRUNE2Q8WUY3 3088 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 PKD1P98161 4303 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 KNDC1Q76NI1 1749 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 NWD2Q9ULI1 1742 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 MAPKBP1O60336 1514 aa-0.19□□□□□ -2.44
TRAPPC13-203ENST00000415825 TULP4Q9NRJ4 1543 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms