RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 NACAE9PAV3 2078 aa5.84□□□□□ -1.47
SIK3-203ENST00000415541 IGLV11-55A0A075B6I3 123 aa5.84□□□□□ -1.47
SIK3-203ENST00000415541 IGHV3OR16-12A0A075B7B8 117 aa5.84□□□□□ -1.47
SIK3-203ENST00000415541 MIAQ16674 131 aa5.84□□□□□ -1.47
SIK3-203ENST00000415541 Q6JHZ5 121 aa5.84□□□□□ -1.47
SIK3-203ENST00000415541 USP17L23D6RBM5 183 aa5.84□□□□□ -1.48
SIK3-203ENST00000415541 COX7A2LO14548 114 aa5.84□□□□□ -1.48
SIK3-203ENST00000415541 PSMB8P28062 276 aa5.84□□□□□ -1.48
SIK3-203ENST00000415541 NSUN5P1Q3KNT7 163 aa5.84□□□□□ -1.48
SIK3-203ENST00000415541 LINC00336Q6ZUF6 198 aa5.84□□□□□ -1.48
SIK3-203ENST00000415541 RHPN1-AS1Q9BWJ2 59 aa5.84□□□□□ -1.48
SIK3-203ENST00000415541 RBMY1BA6NDE4 496 aaKnown RBP5.83□□□□□ -1.48
SIK3-203ENST00000415541 RBMY1EA6NEQ0 496 aaKnown RBP5.83□□□□□ -1.48
SIK3-203ENST00000415541 KNCNA6PVL3 124 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 IGHG2P01859 326 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 CTSGP08311 255 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 RBMY1DP0C7P1 496 aaKnown RBP5.83□□□□□ -1.48
SIK3-203ENST00000415541 RBMY1A1P0DJD3 496 aaKnown RBP5.83□□□□□ -1.48
SIK3-203ENST00000415541 RBMY1CP0DJD4 496 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 RBMY1FQ15415 496 aaKnown RBP5.83□□□□□ -1.48
SIK3-203ENST00000415541 SMIM26A0A096LP01 95 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 AVPP01185 164 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 TIRAPP58753 221 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 S100A7L2Q5SY68 101 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 TMEM61Q8N0U2 210 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 USMG5Q96IX5 58 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 TRAV21A0A0B4J279 112 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 OXTP01178 125 aa5.83□□□□□ -1.48
SIK3-203ENST00000415541 FAM223BA6NKX1 122 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 TSHBP01222 138 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 SNRPD3P62318 126 aaKnown RBP5.82□□□□□ -1.48
SIK3-203ENST00000415541 FAM222AQ5U5X8 452 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 FAM223AQ8IWN6 122 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 TMEM86BQ8N661 226 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 UPK3BQ9BT76 320 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 C11orf21Q9P2W6 132 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 NDUFA12Q9UI09 145 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 IGKV3D-7A0A0C4DH55 119 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 MRPS36P82909 103 aaKnown RBP5.82□□□□□ -1.48
SIK3-203ENST00000415541 MRGPRG-AS1Q2M3A8 158 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 C20orf173Q96LM9 149 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 MED14OSP0DP75 135 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
SIK3-203ENST00000415541 DEFB136Q30KP8 78 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 MRPL53Q96EL3 112 aaKnown RBP5.82□□□□□ -1.48
SIK3-203ENST00000415541 OVOL2Q9BRP0 275 aa5.82□□□□□ -1.48
SIK3-203ENST00000415541 RELNP78509 3460 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 PRAC2D3DTV9 90 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 RPL39P62891 51 aaKnown RBP5.81□□□□□ -1.48
SIK3-203ENST00000415541 LENEPQ9Y5L5 61 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 TRBV12-3P01733 135 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 IGHV3-30-3P0DP02 117 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 HIST2H2BDQ6DRA6 164 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 VSIG2Q96IQ7 327 aa5.81□□□□□ -1.48
SIK3-203ENST00000415541 F8P00451 2351 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 TIMM17BO60830 172 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 PF4P02776 101 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 IGHV4OR15-8A0A075B7B6 117 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 A0A087WW49 117 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 SMAD5-AS1Q9Y6J3 95 aa5.8□□□□□ -1.48
SIK3-203ENST00000415541 A0A0J9YXV3 536 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 ADARB2-AS1A8MUL3 147 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 IGHV4-31P0DP07 118 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 FAM74A4Q5TZK3 123 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 C9orf47Q6ZRZ4 202 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 BUB3O43684 328 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 GHRHP01286 108 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 POLR2KP53803 58 aaKnown RBP5.79□□□□□ -1.48
SIK3-203ENST00000415541 A6NDX4 124 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 DEFB1P60022 68 aa5.79□□□□□ -1.48
SIK3-203ENST00000415541 IGHV1-58A0A0C4DH39 117 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 F6UB75 175 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 PLA2G2AP14555 144 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 GPHB5Q86YW7 130 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 ZFAND3Q9H8U3 227 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 EDN2P20800 178 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 UNQ9165/PRO28630Q6UXU0 137 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 CSMD1Q96PZ7 3565 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 C20orf197Q8N268 126 aa5.78□□□□□ -1.48
SIK3-203ENST00000415541 SOCS3O14543 225 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 C9orf139Q6ZV77 190 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 NDUFA4O00483 81 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 FHL2Q14192 279 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 ATP5EP2Q5VTU8 51 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 Q8N6K4 173 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 DEFB104AQ8WTQ1 72 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 CCDC140Q96MF4 163 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 LITAFQ99732 161 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 ITPR1Q14643 2758 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 TEP1Q99973 2627 aaKnown RBP5.77□□□□□ -1.49
SIK3-203ENST00000415541 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 A0A0U1RQV1 116 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 ADAMTSL4-AS1Q5T5F5 129 aa5.77□□□□□ -1.49
SIK3-203ENST00000415541 CD28P10747 220 aa5.76□□□□□ -1.49
SIK3-203ENST00000415541 Q6ZSV7 163 aa5.76□□□□□ -1.49
SIK3-203ENST00000415541 ATRQ13535 2644 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms