RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 SEC11CQ9BY50 192 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 TMEM191AQ9H0A3 160 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 NIT2Q9NQR4 276 aa5.48□□□□□ -1.53
UPF3AP1-201ENST00000413731 IGHV1-24A0A0C4DH33 117 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 A0A1B0GW15 77 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 SMIM27A0A1W2PRY6 76 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 IBA57-AS1B1ANH7 110 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 NCR2O95944 276 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 CRPP02741 224 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 MT-ND4LP03901 98 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 S100A8P05109 93 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 COTL1Q14019 142 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 AMN1Q8IY45 258 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 SLC7A5P1Q8MH63 180 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 Q8N814 137 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 KRTAP4-12Q9BQ66 201 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 CHCHD7Q9BUK0 85 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 KLK12Q9UKR0 248 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 FAT3Q8TDW7 4589 aa5.47□□□□□ -1.53
UPF3AP1-201ENST00000413731 PKHD1L1Q86WI1 4243 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 TRAV8-3A0A0A6YYJ7 113 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 UBE2L6O14933 153 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 HBBP68871 147 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 GAGE6Q13070 117 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 WFDC2Q14508 124 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 ELOBQ15370 118 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 MPV17L2Q567V2 206 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 C10orf91Q5T1B1 145 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 DEFB104AQ8WTQ1 72 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 RMI2Q96E14 147 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 MRAP2Q96G30 205 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 TMEM243Q9BU79 118 aa5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 CARHSP1Q9Y2V2 147 aaKnown RBP5.46□□□□□ -1.54
UPF3AP1-201ENST00000413731 SDHAF1A6NFY7 115 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 SMKR1H3BMG3 65 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 APCSP02743 223 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 ANGP03950 147 aaKnown RBP5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 IQCJQ1A5X6 159 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 Q6ZSA8 131 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 NTM-AS1Q6ZSK4 140 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 Q8N976 141 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 UBE2WQ96B02 151 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 RNF185Q96GF1 192 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 ST20Q9HBF5 79 aa5.45□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGKV2D-24A0A075B6R9 120 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 C7orf77A4D0Y5 90 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 GAS8-AS1O95177 125 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 PPP1R17O96001 155 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 APOC3P02656 99 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 RAB4AP20338 218 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 RPS10P46783 165 aaKnown RBP5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 CLPSL2Q6UWE3 100 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 ATP5L2Q7Z4Y8 100 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
UPF3AP1-201ENST00000413731 TRBV6-5A0A0K0K1A5 114 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 A0A1B0GXF2 115 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 I3L3M4 83 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 PRSS2P07478 247 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 PMCHP20382 165 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 CKS2P33552 79 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 KRTAP10-4P60372 401 aaPredicted RBP5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 RBX1P62877 108 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 NDUFA5Q16718 116 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 MRPL51Q4U2R6 128 aaKnown RBP5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 FAM104BQ5XKR9 115 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 AMMECR1LQ6DCA0 310 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 ATRAIDQ6UW56 229 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 SCXQ7RTU7 201 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 ALKBH7Q9BT30 221 aaPredicted RBP5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 RPS10P5Q9NQ39 176 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 TMEM242Q9NWH2 141 aa5.43□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGKV2-29A2NJV5 120 aaPredicted RBP5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 D6R8Y8 96 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 FCER1GP30273 86 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 Q0VG73 95 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 RHEBQ15382 184 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 LINC01620Q4KN68 170 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 CD164L2Q6UWJ8 174 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 BTF3L4Q96K17 158 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 COX11Q9Y6N1 276 aa5.42□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGLV5-37A0A075B6J1 123 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 LECT2O14960 151 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 SNAPINO95295 136 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 TSHBP01222 138 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 HLA-DQA1P01909 254 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 REG3AQ06141 175 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 MIAQ16674 131 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 RNASEKQ6P5S7 137 aaKnown RBP5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 LINC00269Q8N2A0 174 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 SVBPQ8N300 66 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 NRACQ8N912 160 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 KIR2DL4Q99706 377 aa5.41□□□□□ -1.54
UPF3AP1-201ENST00000413731 IGKV3OR2-268A0A0C4DH90 116 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 TRBV27A0A0K0K1C4 114 aa5.4□□□□□ -1.54
UPF3AP1-201ENST00000413731 F8WDY8 70 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms