RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SPATA12Q7Z6I5 190 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 NBDYA0A0U1RRE5 68 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 HBDP02042 147 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 ORMDL2Q53FV1 153 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
CHRNA1-204ENST00000409323 VPS13DQ5THJ4 4388 aa9.53□□□□□ -0.88
CHRNA1-204ENST00000409323 Q9HAA7 133 aa9.53□□□□□ -0.88
CHRNA1-204ENST00000409323 DNAH1Q9P2D7 4330 aa9.53□□□□□ -0.88
CHRNA1-204ENST00000409323 Q6ZUT4 128 aa9.52□□□□□ -0.89
CHRNA1-204ENST00000409323 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
CHRNA1-204ENST00000409323 CYSLTR1Q9Y271 337 aa9.52□□□□□ -0.89
CHRNA1-204ENST00000409323 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
CHRNA1-204ENST00000409323 DGAT2L7PQ6IED9 249 aa9.51□□□□□ -0.89
CHRNA1-204ENST00000409323 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
CHRNA1-204ENST00000409323 UBE2WQ96B02 151 aa9.51□□□□□ -0.89
CHRNA1-204ENST00000409323 KMT2AQ03164 3969 aa9.51□□□□□ -0.89
CHRNA1-204ENST00000409323 LINC01549A6NIU2 74 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 SYS1-DBNDD2H3BUS1 97 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 CDPF1Q6NVV7 123 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 LINC00173Q6ZV60 143 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 H7C423 109 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 G0S2P27469 103 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 KRTDAPP60985 99 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 PET117Q6UWS5 81 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 TOMM6Q96B49 74 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 TMEM101Q96IK0 257 aa9.5□□□□□ -0.89
CHRNA1-204ENST00000409323 A0A1B0GUV1 79 aa9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 ENHOQ6UWT2 76 aa9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 TEX43Q6ZNM6 134 aa9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 Q6ZR54 194 aa9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 MRPL52Q86TS9 123 aaKnown RBP9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 SCGB3A1Q96QR1 104 aa9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
CHRNA1-204ENST00000409323 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
CHRNA1-204ENST00000409323 IGLV10-54A0A075B6I4 117 aa9.48□□□□□ -0.89
CHRNA1-204ENST00000409323 TRAV9-2A0A087WT02 112 aa9.48□□□□□ -0.89
CHRNA1-204ENST00000409323 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
CHRNA1-204ENST00000409323 REG3AQ06141 175 aa9.48□□□□□ -0.89
CHRNA1-204ENST00000409323 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
CHRNA1-204ENST00000409323 IGLV4-3A0A075B6K6 122 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 IGIPA6NJ69 53 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 CRPP02741 224 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 ZNF25P17030 456 aaPredicted RBP9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 PKIAP61925 76 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 LINC01545Q5VT33 79 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 ZNF664Q8N3J9 261 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
CHRNA1-204ENST00000409323 C10orf126Q8N4M7 172 aa9.46□□□□□ -0.89
CHRNA1-204ENST00000409323 IFI27L1Q96BM0 104 aa9.46□□□□□ -0.89
CHRNA1-204ENST00000409323 KMT2CQ8NEZ4 4911 aaKnown RBP9.46□□□□□ -0.9
CHRNA1-204ENST00000409323 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.9
CHRNA1-204ENST00000409323 ATP5LO75964 103 aa9.46□□□□□ -0.9
CHRNA1-204ENST00000409323 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
CHRNA1-204ENST00000409323 SACSQ9NZJ4 4579 aa9.45□□□□□ -0.9
CHRNA1-204ENST00000409323 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
CHRNA1-204ENST00000409323 CSDC2Q9Y534 153 aaKnown RBP9.45□□□□□ -0.9
CHRNA1-204ENST00000409323 IGKV2D-24A0A075B6R9 120 aa9.44□□□□□ -0.9
CHRNA1-204ENST00000409323 CTAG1AP78358 180 aa9.44□□□□□ -0.9
CHRNA1-204ENST00000409323 S100A12P80511 92 aa9.44□□□□□ -0.9
CHRNA1-204ENST00000409323 ERASQ7Z444 233 aa9.44□□□□□ -0.9
CHRNA1-204ENST00000409323 PRR34Q9NV39 138 aa9.44□□□□□ -0.9
CHRNA1-204ENST00000409323 PYGO1Q9Y3Y4 419 aa9.44□□□□□ -0.9
CHRNA1-204ENST00000409323 PRSS29PA6NIE9 313 aa9.43□□□□□ -0.9
CHRNA1-204ENST00000409323 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
CHRNA1-204ENST00000409323 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 H0Y8G0 127 aa9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 C1orf134Q5TEV5 83 aa9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 TIMM17AQ99595 171 aa9.42□□□□□ -0.9
CHRNA1-204ENST00000409323 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 C20orf202A1L168 122 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 NPSP0C0P6 89 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 XCL1P47992 114 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 Q6ZN92 141 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 VCX2Q9H322 139 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 C1orf43Q9BWL3 253 aa9.41□□□□□ -0.9
CHRNA1-204ENST00000409323 K7EP13 123 aa9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 CCL25O15444 150 aa9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 ODF1Q14990 250 aa9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 MIAQ16674 131 aa9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 Q6ZRN7 208 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 MAPKAPK5-AS1Q8N8E1 139 aa9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 AMELXQ99217 191 aa9.4□□□□□ -0.9
CHRNA1-204ENST00000409323 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
CHRNA1-204ENST00000409323 LECT2O14960 151 aa9.39□□□□□ -0.91
CHRNA1-204ENST00000409323 RTL8CO15255 209 aa9.39□□□□□ -0.91
CHRNA1-204ENST00000409323 PRSS1P07477 247 aa9.39□□□□□ -0.91
CHRNA1-204ENST00000409323 PSCAO43653 123 aa9.38□□□□□ -0.91
CHRNA1-204ENST00000409323 SS18Q15532 418 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms