RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 OR5A1Q8NGJ0 315 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 TSKUQ8WUA8 353 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 MBD3L1Q8WWY6 194 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 FAM210AQ96ND0 272 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 GFRA4Q9GZZ7 299 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 MANBALQ9NQG1 85 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 PSORS1C2Q9UIG4 136 aa4.82□□□□□ -1.64
LSM5-202ENST00000409292 IGLC6P0CF74 106 aa4.81□□□□□ -1.64
LSM5-202ENST00000409292 FGF6P10767 208 aa4.81□□□□□ -1.64
LSM5-202ENST00000409292 PMCHP20382 165 aa4.81□□□□□ -1.64
LSM5-202ENST00000409292 NTF3P20783 257 aa4.81□□□□□ -1.64
LSM5-202ENST00000409292 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
LSM5-202ENST00000409292 CENPWQ5EE01 88 aa4.81□□□□□ -1.64
LSM5-202ENST00000409292 KANTRA0A1W2PQU2 76 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 SRSF9Q13242 221 aaKnown RBP eCLIP4.8□□□□□ -1.64
LSM5-202ENST00000409292 Q5BKY6 102 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 LYZL1Q6UWQ5 148 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 DIRC1Q969H9 104 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 BORCS7Q96B45 105 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 GNG13Q9P2W3 67 aa4.8□□□□□ -1.64
LSM5-202ENST00000409292 LRP2P98164 4655 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.79□□□□□ -1.64
LSM5-202ENST00000409292 IGKV2-29A2NJV5 120 aaPredicted RBP4.79□□□□□ -1.64
LSM5-202ENST00000409292 I3L3M4 83 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 CCL25O15444 150 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 PDE6DO43924 150 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 APOMO95445 188 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 CAMPP49913 170 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 PTTG1IPP53801 180 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 CCL20P78556 96 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 FOXI1Q12951 378 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 C9orf62Q8N4C0 152 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 C11orf52Q96A22 123 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 CAMK2N2Q96S95 79 aa4.79□□□□□ -1.64
LSM5-202ENST00000409292 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 IGLV4-69A0A075B6H9 119 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 TRAV1-1A0A0B4J248 108 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 LINC00959A0A1B0GUT2 108 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 SDHAF1A6NFY7 115 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 UBE2D1P51668 147 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 C1orf137Q5JT78 98 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 CYTL1Q9NRR1 136 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 MED9Q9NWA0 146 aa4.78□□□□□ -1.64
LSM5-202ENST00000409292 C19orf71A6NCJ1 209 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 C1orf196B1AJZ1 125 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 COX7A2LO14548 114 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 CTRLP40313 264 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
LSM5-202ENST00000409292 ZNF345Q14585 488 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 Q6ZNX1 250 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 GATD1Q8NB37 220 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 ST20Q9HBF5 79 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 RNF213Q63HN8 5207 aa4.77□□□□□ -1.65
LSM5-202ENST00000409292 IGLV1-50A0A075B6I6 118 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 FCER1GP30273 86 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 TAGLN2P37802 199 aaKnown RBP4.76□□□□□ -1.65
LSM5-202ENST00000409292 RPL13AP40429 203 aaKnown RBP4.76□□□□□ -1.65
LSM5-202ENST00000409292 MEF2BQ02080 365 aaPredicted RBP4.76□□□□□ -1.65
LSM5-202ENST00000409292 PRR4Q16378 134 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 C9orf116Q5BN46 136 aaPredicted RBP4.76□□□□□ -1.65
LSM5-202ENST00000409292 TMEM18Q96B42 140 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 LINC00526Q96FQ7 95 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 IMMP2LQ96T52 175 aa4.76□□□□□ -1.65
LSM5-202ENST00000409292 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
LSM5-202ENST00000409292 A0A087WZ39 114 aa4.75□□□□□ -1.65
LSM5-202ENST00000409292 C7orf77A4D0Y5 90 aa4.75□□□□□ -1.65
LSM5-202ENST00000409292 RAB19A4D1S5 217 aa4.75□□□□□ -1.65
LSM5-202ENST00000409292 BCL2L11O43521 198 aa4.75□□□□□ -1.65
LSM5-202ENST00000409292 PPP1R17O96001 155 aa4.75□□□□□ -1.65
LSM5-202ENST00000409292 RPL39LQ96EH5 51 aaKnown RBP4.75□□□□□ -1.65
LSM5-202ENST00000409292 CNFNQ9BYD5 112 aa4.75□□□□□ -1.65
LSM5-202ENST00000409292 TRBV6-5A0A0K0K1A5 114 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 A8MWL6 223 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 F8WDY8 70 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 IGLV7-43P04211 117 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 BCL2P10415 239 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 MRPL52Q86TS9 123 aaKnown RBP4.74□□□□□ -1.65
LSM5-202ENST00000409292 PRR26Q8N8Z3 221 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 CDC42SE2Q9NRR3 84 aa4.74□□□□□ -1.65
LSM5-202ENST00000409292 A0A1W2PNN7 141 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 HMSDA8MTL9 139 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 H0Y9J4 135 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 VCYO14598 125 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 GATCO43716 136 aaKnown RBP4.73□□□□□ -1.65
LSM5-202ENST00000409292 ESDP10768 282 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 UBE2BP63146 152 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 SPAG11BQ08648 103 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 NUP35Q8NFH5 326 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 KIR2DL4Q99706 377 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 TMEM242Q9NWH2 141 aa4.73□□□□□ -1.65
LSM5-202ENST00000409292 TNXBP22105 4242 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 TRAV13-1A0A0B4J241 112 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 NDUFA1O15239 70 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 TMEM241Q24JQ0 296 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 RGS21Q2M5E4 152 aa4.72□□□□□ -1.65
LSM5-202ENST00000409292 PHF5AQ7RTV0 110 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms