RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 IGLC7A0M8Q6 106 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 HMGN4O00479 90 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 PPP1R17O96001 155 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 SFTA2Q6UW10 78 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 DYNLRB1Q9NP97 96 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 NXT2Q9NPJ8 142 aaKnown RBP0.95□□□□□ -2.26
PTPN12-202ENST00000407343 HIGD1BQ9P298 99 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 UQCR10Q9UDW1 63 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 LRRC37A3O60309 1634 aa0.95□□□□□ -2.26
PTPN12-202ENST00000407343 RRBP1Q9P2E9 1410 aaKnown RBP0.95□□□□□ -2.26
PTPN12-202ENST00000407343 CHD3Q12873 2000 aaKnown RBP0.94□□□□□ -2.26
PTPN12-202ENST00000407343 ATP10BO94823 1461 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 UQCRHLA0A096LP55 91 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 COX6CP09669 75 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 EFNA4P52798 201 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 CCL18P55774 89 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 C6orf52Q5T4I8 152 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 ALKAL2Q6UX46 152 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 FAM223AQ8IWN6 122 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 CCL19Q99731 98 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 EDC4Q6P2E9 1401 aaKnown RBP0.94□□□□□ -2.26
PTPN12-202ENST00000407343 ARHGEF5Q12774 1597 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 MED12Q93074 2177 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 HMGXB3Q12766 1538 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 PARP14Q460N5 1801 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 ESPL1Q14674 2120 aa0.94□□□□□ -2.26
PTPN12-202ENST00000407343 TOP2BQ02880 1626 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 FANCAO15360 1455 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 POLA1P09884 1462 aaPredicted RBP0.93□□□□□ -2.26
PTPN12-202ENST00000407343 UNC13BO14795 1591 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 DIP2BQ9P265 1576 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 DIP2CQ9Y2E4 1556 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 TRBV25-1A0A075B6N4 114 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 TMEM14DPA8MWL7 114 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 FXYD1O00168 92 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 UQCRHP07919 91 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 SPAG11BQ08648 103 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 KLKP1Q107X0 134 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 ETDBQ3ZM63 59 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 FAM74A4Q5TZK3 123 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 SPAG11AQ6PDA7 123 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 ZNF720Q7Z2F6 126 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 Q86TA4 180 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 Q96NJ1 140 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 S100A13Q99584 98 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 RABAC1Q9UI14 185 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 SPCS1Q9Y6A9 102 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 V9GYH0 126 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 V9GYV3 84 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 MYOM1P52179 1685 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 EHBP1L1Q8N3D4 1523 aa0.93□□□□□ -2.26
PTPN12-202ENST00000407343 TANC1Q9C0D5 1861 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 PLXNA1Q9UIW2 1896 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 DNMBPQ6XZF7 1577 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 LOC285095A0A1B0GVY8 99 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 A0A1W2PPM0 123 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 CAV3P56539 151 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 WFDC2Q14508 124 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 Q6ZQY7 126 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 PPP1R1CQ8WVI7 109 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 AMELXQ99217 191 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 WFDC6Q9BQY6 131 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 ST20Q9HBF5 79 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 NLRP1Q9C000 1473 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 PSME4Q14997 1843 aa0.92□□□□□ -2.26
PTPN12-202ENST00000407343 KIF14Q15058 1648 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 F8VRH5 84 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 M0R135 149 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 BCE1O60756 84 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 ADIRFQ15847 76 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 NMSQ5H8A3 153 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 LINC01600Q96MT4 127 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 TMEM14BQ9NUH8 114 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 R4GMQ9 66 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 ARL2-SNX15V9GYD0 113 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 DOCK2Q92608 1830 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 ARFGEF1Q9Y6D6 1849 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 CCDC88BA6NC98 1476 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 PPLO60437 1756 aa0.91□□□□□ -2.26
PTPN12-202ENST00000407343 DOCK11Q5JSL3 2073 aa0.9□□□□□ -2.26
PTPN12-202ENST00000407343 ZMYM4Q5VZL5 1548 aa0.9□□□□□ -2.26
PTPN12-202ENST00000407343 MYO3AQ8NEV4 1616 aa0.9□□□□□ -2.26
PTPN12-202ENST00000407343 TRGV1A0A0A0MS02 117 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 FAM223BA6NKX1 122 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 NCR3O14931 201 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 SAA2P0DJI9 122 aaPredicted RBP0.9□□□□□ -2.27
PTPN12-202ENST00000407343 SPTBP11277 2137 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 PI4KAP42356 2102 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 PMCHL1Q16048 86 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 TMEM170BQ5T4T1 132 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 C10orf99Q6UWK7 81 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 CLTCQ00610 1675 aaKnown RBP0.9□□□□□ -2.27
PTPN12-202ENST00000407343 RGPD4Q7Z3J3 1758 aa0.9□□□□□ -2.27
PTPN12-202ENST00000407343 AFDNP55196 1824 aaKnown RBP0.89□□□□□ -2.27
PTPN12-202ENST00000407343 SIPA1L3O60292 1781 aaPredicted RBP0.89□□□□□ -2.27
PTPN12-202ENST00000407343 SCN7AQ01118 1682 aa0.89□□□□□ -2.27
PTPN12-202ENST00000407343 IQSEC2Q5JU85 1478 aa0.89□□□□□ -2.27
PTPN12-202ENST00000407343 TRAV1-2A0A0B4J238 106 aa0.89□□□□□ -2.27
PTPN12-202ENST00000407343 TRBV30A0A0K0K1B3 111 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms