RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 C16orf74Q96GX8 76 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 TIMM21Q9BVV7 248 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 NHP2Q9NX24 153 aaKnown RBP9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 CBY1Q9Y3M2 126 aa9.27□□□□□ -0.93
SMARCB1-203ENST00000407082 IGLV4-3A0A075B6K6 122 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 TRAV4A0A0B4J268 109 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 RPL36AP83881 106 aaKnown RBP9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 C12orf74Q32Q52 190 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 LYRM7Q5U5X0 104 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 RPL36ALQ969Q0 106 aaKnown RBP9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 AMELXQ99217 191 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 SPCS1Q9Y6A9 102 aa9.26□□□□□ -0.93
SMARCB1-203ENST00000407082 IGHV3-73A0A0B4J1V6 119 aa9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 TMEM223A0PJW6 202 aa9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 J3QQQ9 107 aa9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 DAZ2Q13117 558 aaKnown RBP9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 C1orf158Q8N1D5 194 aa9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 MRPL16Q9NX20 251 aaKnown RBP9.25□□□□□ -0.93
SMARCB1-203ENST00000407082 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 A0A1B0GWB2 263 aa9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 GAGE12BA1L429 117 aa9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 MRPS36P82909 103 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 DGAT2L7PQ6IED9 249 aa9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
SMARCB1-203ENST00000407082 DNAH7Q8WXX0 4024 aa9.23□□□□□ -0.93
SMARCB1-203ENST00000407082 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
SMARCB1-203ENST00000407082 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
SMARCB1-203ENST00000407082 K7ERU9 68 aa9.23□□□□□ -0.93
SMARCB1-203ENST00000407082 ZNRF2Q8NHG8 242 aa9.23□□□□□ -0.93
SMARCB1-203ENST00000407082 RNASE8Q8TDE3 154 aaKnown RBP9.23□□□□□ -0.93
SMARCB1-203ENST00000407082 LYSTQ99698 3801 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 IGLL5B9A064 214 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 K7EQD1 137 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 ZNF22P17026 224 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 RRN3P1Q2M238 152 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 SLC25A29Q8N8R3 303 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 PHLDA1Q8WV24 401 aaPredicted RBP9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 ZNF479Q96JC4 524 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 WFDC10AQ9H1F0 79 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 C19orf73Q9NVV2 129 aa9.22□□□□□ -0.93
SMARCB1-203ENST00000407082 HUWE1Q7Z6Z7 4374 aaKnown RBP9.21□□□□□ -0.93
SMARCB1-203ENST00000407082 A0A0J9YY99 117 aa9.21□□□□□ -0.94
SMARCB1-203ENST00000407082 IGHV4-30-4P0DP06 118 aa9.21□□□□□ -0.94
SMARCB1-203ENST00000407082 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
SMARCB1-203ENST00000407082 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
SMARCB1-203ENST00000407082 HYDINQ4G0P3 5121 aa9.21□□□□□ -0.94
SMARCB1-203ENST00000407082 A0A0J9YXV3 536 aa9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 H7C423 109 aa9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 EMP1P54849 157 aa9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 TIRAPP58753 221 aa9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 RPL24P83731 157 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 OVOL2Q9BRP0 275 aa9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 GEMIN7Q9H840 131 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 NACAE9PAV3 2078 aa9.2□□□□□ -0.94
SMARCB1-203ENST00000407082 CSMD3Q7Z407 3707 aa9.19□□□□□ -0.94
SMARCB1-203ENST00000407082 Q6ZSN1 163 aa9.19□□□□□ -0.94
SMARCB1-203ENST00000407082 GTSF1LQ9H1H1 148 aa9.19□□□□□ -0.94
SMARCB1-203ENST00000407082 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 IGHV1-58A0A0C4DH39 117 aa9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 TRBV6-4A0A1B0GX49 114 aa9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 F8W1H4 67 aa9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 UBE2D1P51668 147 aa9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 DEFB104AQ8WTQ1 72 aa9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 OPRPNQ99935 248 aaPredicted RBP9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
SMARCB1-203ENST00000407082 STARD9Q9P2P6 4700 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 TRGV2A0A075B6R0 118 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 SMIM9A6NGZ8 99 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 A8MZ25 164 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 HERVK_113P63121 156 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 OCIAD2Q56VL3 154 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 COPS9Q8WXC6 57 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 TMEM101Q96IK0 257 aa9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 NOP10Q9NPE3 64 aaKnown RBP9.17□□□□□ -0.94
SMARCB1-203ENST00000407082 UBE2L6O14933 153 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 IGHV3-30P01768 117 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 PRM2P04554 102 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 IGHV3-30-5P0DP03 117 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 RPL35AP18077 110 aaKnown RBP9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 UBE2D3P61077 147 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 UBE2D2P62837 147 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 FAM19A3Q7Z5A8 133 aa9.16□□□□□ -0.94
SMARCB1-203ENST00000407082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 TRGV4A0A0C4DH28 118 aa9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 IGKV2-29A2NJV5 120 aaPredicted RBP9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 K7ERJ3 54 aa9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 IGHV3-30-3P0DP02 117 aa9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 Q6ZTI0 123 aa9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 NAA38Q9BRA0 125 aaKnown RBP9.15□□□□□ -0.94
SMARCB1-203ENST00000407082 TRBV20-1A0A075B6N2 111 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 J3QR89 54 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 TIMM17BO60830 172 aa9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 CIRBPQ14011 172 aaKnown RBP9.14□□□□□ -0.95
SMARCB1-203ENST00000407082 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms