RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 Q9UF83 564 aa11.28□□□□□ -0.6
CGREF1-205ENST00000404694 LOC100131303A0A0U1RQF7 123 aa11.27□□□□□ -0.61
CGREF1-205ENST00000404694 SIVA1O15304 175 aa11.27□□□□□ -0.61
CGREF1-205ENST00000404694 TSHBP01222 138 aa11.27□□□□□ -0.61
CGREF1-205ENST00000404694 IFI27L1Q96BM0 104 aa11.27□□□□□ -0.61
CGREF1-205ENST00000404694 DYNC1H1Q14204 4646 aaKnown RBP11.26□□□□□ -0.61
CGREF1-205ENST00000404694 TNP2Q05952 138 aa11.26□□□□□ -0.61
CGREF1-205ENST00000404694 LINC00173Q6ZV60 143 aa11.26□□□□□ -0.61
CGREF1-205ENST00000404694 TOMM6Q96B49 74 aa11.26□□□□□ -0.61
CGREF1-205ENST00000404694 DNAH11Q96DT5 4516 aa11.25□□□□□ -0.61
CGREF1-205ENST00000404694 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
CGREF1-205ENST00000404694 Q8N976 141 aa11.25□□□□□ -0.61
CGREF1-205ENST00000404694 CYSLTR1Q9Y271 337 aa11.25□□□□□ -0.61
CGREF1-205ENST00000404694 ATP6V0E2Q8NHE4 81 aa11.24□□□□□ -0.61
CGREF1-205ENST00000404694 SMAGPQ0VAQ4 97 aa11.23□□□□□ -0.61
CGREF1-205ENST00000404694 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
CGREF1-205ENST00000404694 C2orf66Q6UXQ4 117 aa11.23□□□□□ -0.61
CGREF1-205ENST00000404694 C20orf203Q8NBC4 194 aa11.23□□□□□ -0.61
CGREF1-205ENST00000404694 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.22□□□□□ -0.61
CGREF1-205ENST00000404694 H7C423 109 aa11.22□□□□□ -0.61
CGREF1-205ENST00000404694 WFDC10BQ8IUB3 73 aa11.22□□□□□ -0.61
CGREF1-205ENST00000404694 IGHV3-38A0A0C4DH36 116 aa11.21□□□□□ -0.61
CGREF1-205ENST00000404694 NPSP0C0P6 89 aa11.21□□□□□ -0.61
CGREF1-205ENST00000404694 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.61
CGREF1-205ENST00000404694 ERASQ7Z444 233 aa11.21□□□□□ -0.61
CGREF1-205ENST00000404694 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
CGREF1-205ENST00000404694 HERC2O95714 4834 aa11.21□□□□□ -0.62
CGREF1-205ENST00000404694 KIAA1109Q2LD37 5005 aa11.2□□□□□ -0.62
CGREF1-205ENST00000404694 TRBV25-1A0A075B6N4 114 aa11.2□□□□□ -0.62
CGREF1-205ENST00000404694 CHCHD7Q9BUK0 85 aa11.2□□□□□ -0.62
CGREF1-205ENST00000404694 VAMP8Q9BV40 100 aa11.2□□□□□ -0.62
CGREF1-205ENST00000404694 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 PRSS1P07477 247 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 TIRAPP58753 221 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 Q6ZN92 141 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 TMEM141Q96I45 108 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 TIMM17AQ99595 171 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 PYGO1Q9Y3Y4 419 aa11.19□□□□□ -0.62
CGREF1-205ENST00000404694 NTM-AS1Q6ZSK4 140 aa11.18□□□□□ -0.62
CGREF1-205ENST00000404694 TMEM243Q9BU79 118 aa11.18□□□□□ -0.62
CGREF1-205ENST00000404694 TIMM21Q9BVV7 248 aa11.18□□□□□ -0.62
CGREF1-205ENST00000404694 TRAV12-1A0A0B4J245 112 aa11.17□□□□□ -0.62
CGREF1-205ENST00000404694 TSTD3H0UI37 97 aa11.17□□□□□ -0.62
CGREF1-205ENST00000404694 DNAH10OSP0CZ25 163 aa11.17□□□□□ -0.62
CGREF1-205ENST00000404694 PKIAP61925 76 aa11.17□□□□□ -0.62
CGREF1-205ENST00000404694 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
CGREF1-205ENST00000404694 SPANXA1Q9NS26 97 aa11.17□□□□□ -0.62
CGREF1-205ENST00000404694 TRAV9-2A0A087WT02 112 aa11.16□□□□□ -0.62
CGREF1-205ENST00000404694 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
CGREF1-205ENST00000404694 H0Y8G0 127 aa11.16□□□□□ -0.62
CGREF1-205ENST00000404694 Q6ZRN7 208 aaPredicted RBP11.16□□□□□ -0.62
CGREF1-205ENST00000404694 CSDC2Q9Y534 153 aaKnown RBP11.16□□□□□ -0.62
CGREF1-205ENST00000404694 HSBP1L1C9JCN9 74 aa11.16□□□□□ -0.62
CGREF1-205ENST00000404694 MRPL52Q86TS9 123 aaKnown RBP11.16□□□□□ -0.62
CGREF1-205ENST00000404694 ZNF664Q8N3J9 261 aa11.16□□□□□ -0.62
CGREF1-205ENST00000404694 K7EP13 123 aa11.15□□□□□ -0.63
CGREF1-205ENST00000404694 UBE2L6O14933 153 aa11.15□□□□□ -0.63
CGREF1-205ENST00000404694 ZNF25P17030 456 aaPredicted RBP11.15□□□□□ -0.63
CGREF1-205ENST00000404694 RPL39P62891 51 aaKnown RBP11.15□□□□□ -0.63
CGREF1-205ENST00000404694 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.63
CGREF1-205ENST00000404694 A0A087WX48 190 aa11.14□□□□□ -0.63
CGREF1-205ENST00000404694 ODF1Q14990 250 aa11.14□□□□□ -0.63
CGREF1-205ENST00000404694 LELP1Q5T871 98 aa11.14□□□□□ -0.63
CGREF1-205ENST00000404694 UBE2D4Q9Y2X8 147 aa11.14□□□□□ -0.63
CGREF1-205ENST00000404694 MRPS36P82909 103 aaKnown RBP11.13□□□□□ -0.63
CGREF1-205ENST00000404694 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
CGREF1-205ENST00000404694 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.12□□□□□ -0.63
CGREF1-205ENST00000404694 TRAV8-6A0A0B4J262 113 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 IGKV2-29A2NJV5 120 aaPredicted RBP11.12□□□□□ -0.63
CGREF1-205ENST00000404694 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 LINC01556Q5JQF7 62 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 DGAT2L7PQ6IED9 249 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 C10orf126Q8N4M7 172 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 CHCHD5Q9BSY4 110 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 LRP1BQ9NZR2 4599 aa11.12□□□□□ -0.63
CGREF1-205ENST00000404694 C16orf90A8MZG2 172 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 DPM2O94777 84 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 FGF6P10767 208 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 PLNP26678 52 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 PMVKQ15126 192 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 AMMECR1LQ6DCA0 310 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 TMEM101Q96IK0 257 aa11.11□□□□□ -0.63
CGREF1-205ENST00000404694 A0A1B0GUV1 79 aa11.1□□□□□ -0.63
CGREF1-205ENST00000404694 PCP4L1A6NKN8 68 aa11.1□□□□□ -0.63
CGREF1-205ENST00000404694 F8VRH5 84 aa11.1□□□□□ -0.63
CGREF1-205ENST00000404694 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
CGREF1-205ENST00000404694 CHTOPQ9Y3Y2 248 aaKnown RBP11.1□□□□□ -0.63
CGREF1-205ENST00000404694 IGLV4-3A0A075B6K6 122 aa11.09□□□□□ -0.63
CGREF1-205ENST00000404694 IGKCP01834 107 aa11.09□□□□□ -0.63
CGREF1-205ENST00000404694 OR5A1Q8NGJ0 315 aa11.09□□□□□ -0.63
CGREF1-205ENST00000404694 VCX2Q9H322 139 aa11.09□□□□□ -0.63
CGREF1-205ENST00000404694 DNAH5Q8TE73 4624 aa11.09□□□□□ -0.63
CGREF1-205ENST00000404694 KRTAP10-2P60368 255 aa11.08□□□□□ -0.64
CGREF1-205ENST00000404694 AMELXQ99217 191 aa11.08□□□□□ -0.64
CGREF1-205ENST00000404694 PRO1933Q9H354 126 aa11.08□□□□□ -0.64
CGREF1-205ENST00000404694 MRPL35Q9NZE8 188 aaKnown RBP11.08□□□□□ -0.64
CGREF1-205ENST00000404694 IGHV3-30P01768 117 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms