RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 APCSP02743 223 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 RAB4AP20338 218 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 PMCHP20382 165 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 PEA15Q15121 130 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 FAM74A3Q4VXF1 159 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 RNASEKQ6P5S7 137 aaKnown RBP3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 SCXQ7RTU7 201 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 TMEM191AQ9H0A3 160 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 TMEM242Q9NWH2 141 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 NAT8Q9UHE5 227 aa3.74□□□□□ -1.81
HMGB1P20-201ENST00000402555 TRBV6-5A0A0K0K1A5 114 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 SMIM27A0A1W2PRY6 76 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 GAGE12HA6NDE8 117 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 I3L3M4 83 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 TSHBP01222 138 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 FGF6P10767 208 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 CAMPP49913 170 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 RIGQ13278 110 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 C14orf177Q52M58 125 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 AMMECR1LQ6DCA0 310 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 ST20Q9HBF5 79 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 NAT8BQ9UHF3 227 aa3.73□□□□□ -1.81
HMGB1P20-201ENST00000402555 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 hDV102S1A0JD36 115 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 PANO1I0J062 215 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 ESDP10768 282 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 POLR2KP53803 58 aaKnown RBP3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 MRPL51Q4U2R6 128 aaKnown RBP3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 MRPL54Q6P161 138 aaKnown RBP3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 NRACQ8N912 160 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 CIRBP-AS1Q8TBR5 109 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 MRAP2Q96G30 205 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 CHAC1Q9BUX1 264 aa3.72□□□□□ -1.81
HMGB1P20-201ENST00000402555 TRBV27A0A0K0K1C4 114 aa3.71□□□□□ -1.82
HMGB1P20-201ENST00000402555 HIGD2BQ4VC39 106 aa3.71□□□□□ -1.82
HMGB1P20-201ENST00000402555 FAM104BQ5XKR9 115 aa3.71□□□□□ -1.82
HMGB1P20-201ENST00000402555 C15orf56Q8N910 161 aa3.71□□□□□ -1.82
HMGB1P20-201ENST00000402555 C9orf163Q8N9P6 203 aa3.71□□□□□ -1.82
HMGB1P20-201ENST00000402555 CHCHD10Q8WYQ3 142 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P20-201ENST00000402555 A0A1B0GXF2 115 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 C7orf77A4D0Y5 90 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 H7C423 109 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 CCL25O15444 150 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 FCER1GP30273 86 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 CKS2P33552 79 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 XCL1P47992 114 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 SUMO2P61956 95 aaKnown RBP3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 CNBPP62633 177 aaKnown RBP3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 FOXI1Q12951 378 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 RNF151Q2KHN1 245 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 RNASE13Q5GAN3 156 aaKnown RBP3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 DGAT2L7PQ6IED9 249 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 SDIM1Q6ZPB5 146 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 CLRN3Q8NCR9 226 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 OR5A1Q8NGJ0 315 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 TMEM101Q96IK0 257 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 BTF3L4Q96K17 158 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 SMDT1Q9H4I9 107 aa3.7□□□□□ -1.82
HMGB1P20-201ENST00000402555 LINC00959A0A1B0GUT2 108 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 D6R8Y8 96 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 VCYO14598 125 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 TNFRSF6BO95407 300 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 NPYP01303 97 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 ZNF25P17030 456 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 RAB14P61106 215 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 HBBP68871 147 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 MRPL52Q86TS9 123 aaKnown RBP3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 LINC00526Q96FQ7 95 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 KRTAP9-8Q9BYQ0 159 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 CDC42SE2Q9NRR3 84 aa3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
HMGB1P20-201ENST00000402555 IGHV3-64A0A075B6Q5 118 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 A0A1B0GW15 77 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 LINC00862A6NCI5 91 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 PPP1R17O96001 155 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 RPL39P62891 51 aaKnown RBP3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 IFITM2Q01629 132 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 CFAP161Q6P656 301 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 Q6ZUT4 128 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 ZNF664Q8N3J9 261 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 KIR2DL4Q99706 377 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 SMIM2Q9BVW6 85 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
HMGB1P20-201ENST00000402555 PKHD1L1Q86WI1 4243 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 TRBV24-1A0A075B6N3 115 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 GVQW2A0A096LPI5 108 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 TRAV13-1A0A0B4J241 112 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 F8W036 122 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 PPP1R2P9O14990 202 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 TCAPO15273 167 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 S100A8P05109 93 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 RPL37AP61513 92 aaKnown RBP3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 COX6A2Q02221 97 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 SS18Q15532 418 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 CLLU1Q5K131 121 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 TMEM136Q6ZRR5 245 aa3.67□□□□□ -1.82
HMGB1P20-201ENST00000402555 PRSS3P2Q8NHM4 247 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms