RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
LINC00649-202ENST00000400353 MALP21145 153 aa7.81□□□□□ -1.16
LINC00649-202ENST00000400353 C11orf44Q8N8P7 122 aa7.81□□□□□ -1.16
LINC00649-202ENST00000400353 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 IL17DQ8TAD2 202 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 RAB37Q96AX2 223 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 HIVEP2P31629 2446 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 NIPBLQ6KC79 2804 aaeCLIP7.8□□□□□ -1.16
LINC00649-202ENST00000400353 IGLV4-3A0A075B6K6 122 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 IGHV3-73A0A0B4J1V6 119 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 TTC32Q5I0X7 151 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 TMEM170BQ5T4T1 132 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 SAMD5Q5TGI4 173 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 NHP2Q9NX24 153 aaKnown RBP7.8□□□□□ -1.16
LINC00649-202ENST00000400353 XCL2Q9UBD3 114 aa7.8□□□□□ -1.16
LINC00649-202ENST00000400353 A8MZ25 164 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 SCGB1D4Q6XE38 83 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 SH2D6Q7Z4S9 175 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 C1orf158Q8N1D5 194 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 PHLDA1Q8WV24 401 aaPredicted RBP7.79□□□□□ -1.16
LINC00649-202ENST00000400353 AGRNO00468 2067 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 LEPROTO15243 131 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 GAGE2BQ13066 116 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 GAGE2EQ4V326 116 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 GAGE2DQ9UEU5 116 aa7.79□□□□□ -1.16
LINC00649-202ENST00000400353 NSD1Q96L73 2696 aaPredicted RBP7.78□□□□□ -1.16
LINC00649-202ENST00000400353 IGLV1-51P01701 117 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 LGALS3P17931 250 aaKnown RBP7.78□□□□□ -1.16
LINC00649-202ENST00000400353 INSL3P51460 131 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 PROK1P58294 105 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 C12orf74Q32Q52 190 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 HIST2H2BDQ6DRA6 164 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 DEFB104AQ8WTQ1 72 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
LINC00649-202ENST00000400353 PLEKHB2Q96CS7 222 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 AMELXQ99217 191 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 F8P00451 2351 aa7.78□□□□□ -1.16
LINC00649-202ENST00000400353 TMEM223A0PJW6 202 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 TMEM262E9PQX1 116 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 PRO0461Q9UI25 63 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 TEP1Q99973 2627 aaKnown RBP7.77□□□□□ -1.17
LINC00649-202ENST00000400353 J3QQQ9 107 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 CRLF1O75462 422 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 LY6G6DO95868 133 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 PRM2P04554 102 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 Q6ZSN1 163 aa7.77□□□□□ -1.17
LINC00649-202ENST00000400353 TRAV4A0A0B4J268 109 aa7.76□□□□□ -1.17
LINC00649-202ENST00000400353 TRBV10-1A0A0K0K1A3 114 aa7.76□□□□□ -1.17
LINC00649-202ENST00000400353 ZNF22P17026 224 aaPredicted RBP7.76□□□□□ -1.17
LINC00649-202ENST00000400353 SRSF9Q13242 221 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC00649-202ENST00000400353 NDUFA11Q86Y39 141 aa7.76□□□□□ -1.17
LINC00649-202ENST00000400353 CHCHD7Q9BUK0 85 aa7.76□□□□□ -1.17
LINC00649-202ENST00000400353 TRBV20-1A0A075B6N2 111 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 TRGV1A0A0A0MS02 117 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 A0A0J9YY99 117 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 ADARB2-AS1A8MUL3 147 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 IGLL5B9A064 214 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 C16orf74Q96GX8 76 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 OPRPNQ99935 248 aaPredicted RBP7.75□□□□□ -1.17
LINC00649-202ENST00000400353 TIMM21Q9BVV7 248 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 IGHV3OR16-12A0A075B7B8 117 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 K7ERJ3 54 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 APOMO95445 188 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
LINC00649-202ENST00000400353 DAZ2Q13117 558 aaKnown RBP7.75□□□□□ -1.17
LINC00649-202ENST00000400353 UBE2D4Q9Y2X8 147 aa7.75□□□□□ -1.17
LINC00649-202ENST00000400353 A0A0J9YXV3 536 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 H3BMG7 143 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 K7EQD1 137 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 RPL36AP83881 106 aaKnown RBP7.74□□□□□ -1.17
LINC00649-202ENST00000400353 RRN3P1Q2M238 152 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 GAGE13Q4V321 117 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 RPL36ALQ969Q0 106 aaKnown RBP7.74□□□□□ -1.17
LINC00649-202ENST00000400353 C19orf73Q9NVV2 129 aa7.74□□□□□ -1.17
LINC00649-202ENST00000400353 PF4P02776 101 aa7.73□□□□□ -1.17
LINC00649-202ENST00000400353 TSPEAR-AS2P59090 65 aa7.73□□□□□ -1.17
LINC00649-202ENST00000400353 C4orf26Q17RF5 130 aa7.73□□□□□ -1.17
LINC00649-202ENST00000400353 SETD2Q9BYW2 2564 aaPredicted RBP7.73□□□□□ -1.17
LINC00649-202ENST00000400353 FN1P02751 2386 aaKnown RBP7.73□□□□□ -1.17
LINC00649-202ENST00000400353 INAFM1C9JVW0 142 aa7.72□□□□□ -1.17
LINC00649-202ENST00000400353 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
LINC00649-202ENST00000400353 UBE2D1P51668 147 aa7.72□□□□□ -1.17
LINC00649-202ENST00000400353 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
LINC00649-202ENST00000400353 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
LINC00649-202ENST00000400353 LINC00336Q6ZUF6 198 aa7.72□□□□□ -1.17
LINC00649-202ENST00000400353 FAM104AQ969W3 186 aa7.72□□□□□ -1.17
LINC00649-202ENST00000400353 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.71□□□□□ -1.17
LINC00649-202ENST00000400353 IGKV2-29A2NJV5 120 aaPredicted RBP7.71□□□□□ -1.17
LINC00649-202ENST00000400353 GIG44P09565 113 aaPredicted RBP7.71□□□□□ -1.17
LINC00649-202ENST00000400353 LYRM7Q5U5X0 104 aa7.71□□□□□ -1.17
LINC00649-202ENST00000400353 OVOL2Q9BRP0 275 aa7.71□□□□□ -1.17
LINC00649-202ENST00000400353 JMJD1CQ15652 2540 aa7.71□□□□□ -1.18
LINC00649-202ENST00000400353 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
LINC00649-202ENST00000400353 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
LINC00649-202ENST00000400353 Q6ZTI0 123 aa7.71□□□□□ -1.18
LINC00649-202ENST00000400353 IGHV3-38A0A0C4DH36 116 aa7.7□□□□□ -1.18
LINC00649-202ENST00000400353 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
LINC00649-202ENST00000400353 Q5XG85 94 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms