RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 C10orf25Q5T742 122 aa8.9□□□□□ -0.99
CACNA1C-213ENST00000399629 KIAA1549LQ6ZVL6 1849 aa8.9□□□□□ -0.99
CACNA1C-213ENST00000399629 M0QXV9 152 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 SLPIP03973 132 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 ROS1P08922 2347 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 DSCAMO60469 2012 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 SRCAPQ6ZRS2 3230 aa8.89□□□□□ -0.99
CACNA1C-213ENST00000399629 FAM236AA0A1B0GUQ0 79 aa8.88□□□□□ -0.99
CACNA1C-213ENST00000399629 FAM236BA0A1B0GV22 79 aa8.88□□□□□ -0.99
CACNA1C-213ENST00000399629 IGLV4-3A0A075B6K6 122 aa8.88□□□□□ -0.99
CACNA1C-213ENST00000399629 C16orf95Q9H693 158 aa8.88□□□□□ -0.99
CACNA1C-213ENST00000399629 LINC00959A0A1B0GUT2 108 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 C3orf84H3BNL1 204 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 CDSNQ15517 529 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 HIGD1BQ9P298 99 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 IGLV1-40P01703 118 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 M0QY20 66 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 H3BT86 120 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 NDUFC2O95298 119 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 C1orf137Q5JT78 98 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 Q6ZVQ6 151 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 GPR179Q6PRD1 2367 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 FXYD2P54710 66 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 PIK3CD-AS1Q5SR53 167 aa8.87□□□□□ -0.99
CACNA1C-213ENST00000399629 LINC01556Q5JQF7 62 aa8.86□□□□□ -0.99
CACNA1C-213ENST00000399629 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
CACNA1C-213ENST00000399629 CCKP06307 115 aa8.86□□□□□ -0.99
CACNA1C-213ENST00000399629 HIVEP2P31629 2446 aa8.86□□□□□ -0.99
CACNA1C-213ENST00000399629 ABCA1O95477 2261 aa8.85□□□□□ -0.99
CACNA1C-213ENST00000399629 C6orf99Q4VX62 202 aa8.85□□□□□ -0.99
CACNA1C-213ENST00000399629 C1orf229Q6ZS94 237 aaPredicted RBP8.85□□□□□ -0.99
CACNA1C-213ENST00000399629 LINC00337Q8N6G1 96 aa8.85□□□□□ -0.99
CACNA1C-213ENST00000399629 MUC6Q6W4X9 2439 aa8.85□□□□□ -0.99
CACNA1C-213ENST00000399629 AVPP01185 164 aa8.84□□□□□ -0.99
CACNA1C-213ENST00000399629 Q6ZTC4 211 aa8.84□□□□□ -0.99
CACNA1C-213ENST00000399629 PCNX1Q96RV3 2341 aa8.84□□□□□ -0.99
CACNA1C-213ENST00000399629 IGLC6P0CF74 106 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 TEN1Q86WV5 123 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 PRM2P04554 102 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 Q8N6K4 173 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 G3V4G9 280 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 REG3GQ6UW15 175 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
CACNA1C-213ENST00000399629 LINC00308Q8TCZ7 52 aa8.82□□□□□ -1
CACNA1C-213ENST00000399629 TAX1BP3O14907 124 aa8.82□□□□□ -1
CACNA1C-213ENST00000399629 ZNF22P17026 224 aaPredicted RBP8.82□□□□□ -1
CACNA1C-213ENST00000399629 NUP210LQ5VU65 1888 aa8.82□□□□□ -1
CACNA1C-213ENST00000399629 PRYO14603 147 aa8.81□□□□□ -1
CACNA1C-213ENST00000399629 COX17Q14061 63 aa8.81□□□□□ -1
CACNA1C-213ENST00000399629 C6orf223Q8N319 242 aa8.81□□□□□ -1
CACNA1C-213ENST00000399629 NCOA6Q14686 2063 aaPredicted RBP8.8□□□□□ -1
CACNA1C-213ENST00000399629 X6R8D5 127 aa8.8□□□□□ -1
CACNA1C-213ENST00000399629 IGLV1-51P01701 117 aa8.8□□□□□ -1
CACNA1C-213ENST00000399629 CREBBPQ92793 2442 aa8.8□□□□□ -1
CACNA1C-213ENST00000399629 NUPR1O60356 82 aa8.79□□□□□ -1
CACNA1C-213ENST00000399629 RETNLBQ9BQ08 111 aa8.79□□□□□ -1
CACNA1C-213ENST00000399629 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
CACNA1C-213ENST00000399629 ALPK3Q96L96 1907 aa8.79□□□□□ -1
CACNA1C-213ENST00000399629 ENHOQ6UWT2 76 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 CYSRT1A8MQ03 144 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 FAM229AH3BQW9 127 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 A0A1B0GXF2 115 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 TSHBP01222 138 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 SERTAD4-AS1Q5TG53 156 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 ZFHX2Q9C0A1 2572 aaPredicted RBP8.78□□□□□ -1
CACNA1C-213ENST00000399629 P0C879 139 aa8.78□□□□□ -1
CACNA1C-213ENST00000399629 COA6Q5JTJ3 125 aaKnown RBP8.78□□□□□ -1
CACNA1C-213ENST00000399629 LST1O00453 97 aa8.77□□□□□ -1
CACNA1C-213ENST00000399629 Q8N9L7 120 aa8.77□□□□□ -1
CACNA1C-213ENST00000399629 ZNF73O43830 326 aaPredicted RBP8.77□□□□□ -1.01
CACNA1C-213ENST00000399629 WFDC2Q14508 124 aa8.77□□□□□ -1.01
CACNA1C-213ENST00000399629 PYGO1Q9Y3Y4 419 aa8.77□□□□□ -1.01
CACNA1C-213ENST00000399629 PTPRQQ9UMZ3 2332 aa8.77□□□□□ -1.01
CACNA1C-213ENST00000399629 ARHGAP21Q5T5U3 1957 aa8.77□□□□□ -1.01
CACNA1C-213ENST00000399629 Q6ZQY7 126 aa8.77□□□□□ -1.01
CACNA1C-213ENST00000399629 MRPL55Q7Z7F7 128 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 CHCHD7Q9BUK0 85 aa8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 B5MCH6 92 aa8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 SDIM1Q6ZPB5 146 aa8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 ESRGQ1W209 222 aa8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 SPTAN1Q13813 2472 aaKnown RBP8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 Q8IZM0 81 aa8.76□□□□□ -1.01
CACNA1C-213ENST00000399629 LINC00643Q86TS7 51 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 ZNF295-AS1Q8N0V1 137 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 COL5A1P20908 1838 aaPredicted RBP8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 RNASE3P12724 160 aaKnown RBP8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 BRWD1-AS2P59051 145 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 ODF3L2Q3SX64 289 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 KLLNB2CW77 178 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 EDN2P20800 178 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 XGP55808 180 aa8.75□□□□□ -1.01
CACNA1C-213ENST00000399629 A8MZ25 164 aa8.74□□□□□ -1.01
CACNA1C-213ENST00000399629 MRPS36P82909 103 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-213ENST00000399629 MDFIQ99750 246 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms