RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 A0A0U1RQV1 116 aa8.35□□□□□ -1.07
RGPD2-201ENST00000398146 CDKN2A-AS1Q9UH64 79 aa8.35□□□□□ -1.07
RGPD2-201ENST00000398146 H7C423 109 aa8.35□□□□□ -1.07
RGPD2-201ENST00000398146 PLXNA4Q9HCM2 1894 aa8.34□□□□□ -1.07
RGPD2-201ENST00000398146 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
RGPD2-201ENST00000398146 TMEM131Q92545 1883 aa8.34□□□□□ -1.07
RGPD2-201ENST00000398146 VWA8A3KMH1 1905 aa8.34□□□□□ -1.07
RGPD2-201ENST00000398146 RLFQ13129 1914 aa8.34□□□□□ -1.07
RGPD2-201ENST00000398146 Q6ZTC4 211 aa8.33□□□□□ -1.08
RGPD2-201ENST00000398146 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
RGPD2-201ENST00000398146 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
RGPD2-201ENST00000398146 E9PLD3 99 aa8.33□□□□□ -1.08
RGPD2-201ENST00000398146 REG3GQ6UW15 175 aa8.33□□□□□ -1.08
RGPD2-201ENST00000398146 C1orf147Q96MC9 270 aaPredicted RBP8.33□□□□□ -1.08
RGPD2-201ENST00000398146 G3V4G9 280 aa8.33□□□□□ -1.08
RGPD2-201ENST00000398146 A0A0J9YXY3 114 aa8.32□□□□□ -1.08
RGPD2-201ENST00000398146 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
RGPD2-201ENST00000398146 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
RGPD2-201ENST00000398146 FXYD2P54710 66 aa8.32□□□□□ -1.08
RGPD2-201ENST00000398146 SERTAD4-AS1Q5TG53 156 aa8.32□□□□□ -1.08
RGPD2-201ENST00000398146 MALRD1Q5VYJ5 2156 aa8.32□□□□□ -1.08
RGPD2-201ENST00000398146 SNURFQ9Y675 71 aa8.32□□□□□ -1.08
RGPD2-201ENST00000398146 MSMPQ1L6U9 139 aa8.31□□□□□ -1.08
RGPD2-201ENST00000398146 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
RGPD2-201ENST00000398146 Q6ZQY7 126 aa8.31□□□□□ -1.08
RGPD2-201ENST00000398146 PSMG3-AS1Q96PY0 264 aa8.31□□□□□ -1.08
RGPD2-201ENST00000398146 TRBV6-5A0A0K0K1A5 114 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 SPACA4Q8TDM5 124 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 FAM208BQ5VWN6 2430 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 A8MZ25 164 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 ZNF80P51504 273 aaPredicted RBP8.3□□□□□ -1.08
RGPD2-201ENST00000398146 Q6ZS46 218 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 ATRXP46100 2492 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 C16orf90A8MZG2 172 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 TIMM17BO60830 172 aa8.3□□□□□ -1.08
RGPD2-201ENST00000398146 PTH2Q96A98 100 aa8.29□□□□□ -1.08
RGPD2-201ENST00000398146 MRPL55Q7Z7F7 128 aaKnown RBP8.29□□□□□ -1.08
RGPD2-201ENST00000398146 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
RGPD2-201ENST00000398146 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
RGPD2-201ENST00000398146 OTOGLQ3ZCN5 2332 aa8.29□□□□□ -1.08
RGPD2-201ENST00000398146 DSCAML1Q8TD84 2053 aa8.29□□□□□ -1.08
RGPD2-201ENST00000398146 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
RGPD2-201ENST00000398146 WFDC2Q14508 124 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 SIPA1L1O43166 1804 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 J3KT08 172 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 PCOTHQ58A44 107 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 PRLHP81277 87 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 TRBV7-6A0A0J9YX20 115 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 COX6A2Q02221 97 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 MRGPRG-AS1Q2M3A8 158 aa8.28□□□□□ -1.08
RGPD2-201ENST00000398146 SIP14410 1827 aa8.27□□□□□ -1.08
RGPD2-201ENST00000398146 ZFHX2Q9C0A1 2572 aaPredicted RBP8.27□□□□□ -1.09
RGPD2-201ENST00000398146 CELA1Q9UNI1 258 aa8.27□□□□□ -1.09
RGPD2-201ENST00000398146 MDFIQ99750 246 aa8.27□□□□□ -1.09
RGPD2-201ENST00000398146 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
RGPD2-201ENST00000398146 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
RGPD2-201ENST00000398146 ODF3Q96PU9 254 aa8.27□□□□□ -1.09
RGPD2-201ENST00000398146 NHLRC4P0CG21 123 aaPredicted RBP8.26□□□□□ -1.09
RGPD2-201ENST00000398146 MUC6Q6W4X9 2439 aa8.26□□□□□ -1.09
RGPD2-201ENST00000398146 CYSRT1A8MQ03 144 aa8.26□□□□□ -1.09
RGPD2-201ENST00000398146 FAM167A-AS1Q96KT0 104 aa8.26□□□□□ -1.09
RGPD2-201ENST00000398146 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
RGPD2-201ENST00000398146 KIF26AQ9ULI4 1882 aaPredicted RBP8.26□□□□□ -1.09
RGPD2-201ENST00000398146 GPR179Q6PRD1 2367 aa8.26□□□□□ -1.09
RGPD2-201ENST00000398146 ZNF73O43830 326 aaPredicted RBP8.25□□□□□ -1.09
RGPD2-201ENST00000398146 Q9BRP9 147 aa8.25□□□□□ -1.09
RGPD2-201ENST00000398146 NDUFV3P56181 108 aaKnown RBP8.25□□□□□ -1.09
RGPD2-201ENST00000398146 IGLV4-3A0A075B6K6 122 aa8.25□□□□□ -1.09
RGPD2-201ENST00000398146 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
RGPD2-201ENST00000398146 C9orf116Q5BN46 136 aaPredicted RBP8.25□□□□□ -1.09
RGPD2-201ENST00000398146 PYGO1Q9Y3Y4 419 aa8.25□□□□□ -1.09
RGPD2-201ENST00000398146 TRBV27A0A0K0K1C4 114 aa8.24□□□□□ -1.09
RGPD2-201ENST00000398146 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
RGPD2-201ENST00000398146 NLRC5Q86WI3 1866 aa8.24□□□□□ -1.09
RGPD2-201ENST00000398146 MT-ATP8P03928 68 aa8.24□□□□□ -1.09
RGPD2-201ENST00000398146 H3BT86 120 aa8.23□□□□□ -1.09
RGPD2-201ENST00000398146 IGLC6P0CF74 106 aa8.23□□□□□ -1.09
RGPD2-201ENST00000398146 NDUFA7O95182 113 aa8.23□□□□□ -1.09
RGPD2-201ENST00000398146 FAM240AA0A1B0GVK7 77 aa8.22□□□□□ -1.09
RGPD2-201ENST00000398146 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
RGPD2-201ENST00000398146 C11orf71Q6IPW1 123 aa8.22□□□□□ -1.09
RGPD2-201ENST00000398146 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
RGPD2-201ENST00000398146 UNQ6190/PRO20217Q6UXQ8 127 aa8.21□□□□□ -1.09
RGPD2-201ENST00000398146 TANC1Q9C0D5 1861 aa8.21□□□□□ -1.09
RGPD2-201ENST00000398146 FAM19A3Q7Z5A8 133 aa8.21□□□□□ -1.09
RGPD2-201ENST00000398146 NDUFC2-KCTD14E9PQ53 114 aa8.21□□□□□ -1.1
RGPD2-201ENST00000398146 MED13LQ71F56 2210 aa8.21□□□□□ -1.1
RGPD2-201ENST00000398146 M0QY20 66 aa8.2□□□□□ -1.1
RGPD2-201ENST00000398146 CACNA1HO95180 2353 aa8.2□□□□□ -1.1
RGPD2-201ENST00000398146 EDN2P20800 178 aa8.2□□□□□ -1.1
RGPD2-201ENST00000398146 TNRC6AQ8NDV7 1962 aaKnown RBP8.2□□□□□ -1.1
RGPD2-201ENST00000398146 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
RGPD2-201ENST00000398146 KRTAP27-1Q3LI81 207 aa8.19□□□□□ -1.1
RGPD2-201ENST00000398146 LINC00208Q96KT6 92 aa8.19□□□□□ -1.1
RGPD2-201ENST00000398146 DSCAMO60469 2012 aa8.19□□□□□ -1.1
RGPD2-201ENST00000398146 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
RGPD2-201ENST00000398146 WNK1Q9H4A3 2382 aa8.19□□□□□ -1.1
RGPD2-201ENST00000398146 NUPR1O60356 82 aa8.18□□□□□ -1.1
RGPD2-201ENST00000398146 SPRY4Q9C004 299 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms