RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 Q0VG73 95 aa16.91■□□□□ 0.3
TMEM55B-202ENST00000398020 C5orf52A6NGY3 159 aa16.91■□□□□ 0.3
TMEM55B-202ENST00000398020 ALKBH7Q9BT30 221 aaPredicted RBP16.91■□□□□ 0.3
TMEM55B-202ENST00000398020 SNRPEP62304 92 aaKnown RBP16.9■□□□□ 0.3
TMEM55B-202ENST00000398020 TM2D2Q9BX73 214 aa16.9■□□□□ 0.3
TMEM55B-202ENST00000398020 Q8N8P6 123 aa16.89■□□□□ 0.29
TMEM55B-202ENST00000398020 IGKV3OR2-268A0A0C4DH90 116 aa16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 ZNF25P17030 456 aaPredicted RBP16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 IFI27P40305 119 aaPredicted RBP16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 RPL39P62891 51 aaKnown RBP16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 RMI2Q96E14 147 aa16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 TMEM101Q96IK0 257 aa16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 MIAQ16674 131 aa16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 MRPL52Q86TS9 123 aaKnown RBP16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 OR5A1Q8NGJ0 315 aa16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 C1orf43Q9BWL3 253 aa16.88■□□□□ 0.29
TMEM55B-202ENST00000398020 DNAH11Q96DT5 4516 aa16.87■□□□□ 0.29
TMEM55B-202ENST00000398020 IGLV10-54A0A075B6I4 117 aa16.87■□□□□ 0.29
TMEM55B-202ENST00000398020 MAPKAPK5-AS1Q8N8E1 139 aa16.87■□□□□ 0.29
TMEM55B-202ENST00000398020 UBE2D4Q9Y2X8 147 aa16.86■□□□□ 0.29
TMEM55B-202ENST00000398020 A0A087WTM6 91 aa16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 DGAT2L7PQ6IED9 249 aa16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 PKHD1P08F94 4074 aa16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 NDUFA6P56556 154 aa16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 TMEM18Q96B42 140 aa16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 NXT2Q9NPJ8 142 aaKnown RBP16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 COX11Q9Y6N1 276 aa16.85■□□□□ 0.29
TMEM55B-202ENST00000398020 LRCOL1A6NCL2 159 aa16.84■□□□□ 0.29
TMEM55B-202ENST00000398020 LECT2O14960 151 aa16.83■□□□□ 0.28
TMEM55B-202ENST00000398020 PRSS3P2Q8NHM4 247 aa16.83■□□□□ 0.28
TMEM55B-202ENST00000398020 CDC42SE2Q9NRR3 84 aa16.83■□□□□ 0.28
TMEM55B-202ENST00000398020 WFDC2Q14508 124 aa16.82■□□□□ 0.28
TMEM55B-202ENST00000398020 RNASE13Q5GAN3 156 aaKnown RBP16.82■□□□□ 0.28
TMEM55B-202ENST00000398020 BAALCQ8WXS3 180 aa16.82■□□□□ 0.28
TMEM55B-202ENST00000398020 ZNF664Q8N3J9 261 aa16.81■□□□□ 0.28
TMEM55B-202ENST00000398020 FUSP35637 526 aaKnown RBP eCLIP16.8■□□□□ 0.28
TMEM55B-202ENST00000398020 SPATA12Q7Z6I5 190 aa16.8■□□□□ 0.28
TMEM55B-202ENST00000398020 CSDC2Q9Y534 153 aaKnown RBP16.8■□□□□ 0.28
TMEM55B-202ENST00000398020 KRTAP10-2P60368 255 aa16.79■□□□□ 0.28
TMEM55B-202ENST00000398020 SMAGPQ0VAQ4 97 aa16.79■□□□□ 0.28
TMEM55B-202ENST00000398020 ORMDL2Q53FV1 153 aa16.79■□□□□ 0.28
TMEM55B-202ENST00000398020 Q6ZUT4 128 aa16.79■□□□□ 0.28
TMEM55B-202ENST00000398020 TRAV8-4A0A0B4J246 113 aa16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 EREGO14944 169 aa16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 KRTAP26-1Q6PEX3 210 aa16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 OPRPNQ99935 248 aaPredicted RBP16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 TIMM21Q9BVV7 248 aa16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 K7EMI3 77 aa16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 COA6Q5JTJ3 125 aaKnown RBP16.78■□□□□ 0.28
TMEM55B-202ENST00000398020 C2orf66Q6UXQ4 117 aa16.77■□□□□ 0.28
TMEM55B-202ENST00000398020 C18orf32Q8TCD1 76 aa16.77■□□□□ 0.28
TMEM55B-202ENST00000398020 SPANXA1Q9NS26 97 aa16.77■□□□□ 0.28
TMEM55B-202ENST00000398020 FAM104AQ969W3 186 aa16.76■□□□□ 0.27
TMEM55B-202ENST00000398020 CYSLTR1Q9Y271 337 aa16.75■□□□□ 0.27
TMEM55B-202ENST00000398020 FA2HQ7L5A8 372 aa16.75■□□□□ 0.27
TMEM55B-202ENST00000398020 LINC00959A0A1B0GUT2 108 aa16.74■□□□□ 0.27
TMEM55B-202ENST00000398020 Q8N814 137 aa16.74■□□□□ 0.27
TMEM55B-202ENST00000398020 CHCHD10Q8WYQ3 142 aaPredicted RBP16.74■□□□□ 0.27
TMEM55B-202ENST00000398020 GAGE12HA6NDE8 117 aa16.72■□□□□ 0.27
TMEM55B-202ENST00000398020 HIST3H2BBQ8N257 126 aa16.72■□□□□ 0.27
TMEM55B-202ENST00000398020 TRAV13-1A0A0B4J241 112 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 LINC01546A6NGU7 62 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 IFITM10A6NMD0 228 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 XCL1P47992 114 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 AKR1D1P51857 326 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 URB1-AS1Q96HZ7 61 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 PYGO1Q9Y3Y4 419 aa16.71■□□□□ 0.27
TMEM55B-202ENST00000398020 CCL25O15444 150 aa16.7■□□□□ 0.26
TMEM55B-202ENST00000398020 BIRC6Q9NR09 4857 aa16.7■□□□□ 0.26
TMEM55B-202ENST00000398020 IGLV4-3A0A075B6K6 122 aa16.69■□□□□ 0.26
TMEM55B-202ENST00000398020 USP17L23D6RBM5 183 aa16.69■□□□□ 0.26
TMEM55B-202ENST00000398020 MRPS36P82909 103 aaKnown RBP16.69■□□□□ 0.26
TMEM55B-202ENST00000398020 SS18Q15532 418 aa16.69■□□□□ 0.26
TMEM55B-202ENST00000398020 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.69■□□□□ 0.26
TMEM55B-202ENST00000398020 C16orf90A8MZG2 172 aa16.68■□□□□ 0.26
TMEM55B-202ENST00000398020 TOMM6Q96B49 74 aa16.68■□□□□ 0.26
TMEM55B-202ENST00000398020 AP5S1Q9NUS5 200 aa16.68■□□□□ 0.26
TMEM55B-202ENST00000398020 LINC00614P0C842 121 aa16.67■□□□□ 0.26
TMEM55B-202ENST00000398020 DNAH5Q8TE73 4624 aa16.67■□□□□ 0.26
TMEM55B-202ENST00000398020 IGIPA6NJ69 53 aa16.66■□□□□ 0.26
TMEM55B-202ENST00000398020 G0S2P27469 103 aa16.66■□□□□ 0.26
TMEM55B-202ENST00000398020 PDZD11Q5EBL8 140 aa16.66■□□□□ 0.26
TMEM55B-202ENST00000398020 TMEM141Q96I45 108 aa16.66■□□□□ 0.26
TMEM55B-202ENST00000398020 PGPEP1Q9NXJ5 209 aa16.66■□□□□ 0.26
TMEM55B-202ENST00000398020 FOXI1Q12951 378 aa16.65■□□□□ 0.26
TMEM55B-202ENST00000398020 ZC2HC1BQ5TFG8 222 aa16.65■□□□□ 0.26
TMEM55B-202ENST00000398020 PMCHL1Q16048 86 aa16.64■□□□□ 0.25
TMEM55B-202ENST00000398020 DYNC1H1Q14204 4646 aaKnown RBP16.63■□□□□ 0.25
TMEM55B-202ENST00000398020 S100A2P29034 98 aa16.63■□□□□ 0.25
TMEM55B-202ENST00000398020 IGLV5-52A0A0A0MRZ9 124 aa16.62■□□□□ 0.25
TMEM55B-202ENST00000398020 SCGB3A1Q96QR1 104 aa16.62■□□□□ 0.25
TMEM55B-202ENST00000398020 HIST1H2BLQ99880 126 aa16.62■□□□□ 0.25
TMEM55B-202ENST00000398020 CD164L2Q6UWJ8 174 aa16.62■□□□□ 0.25
TMEM55B-202ENST00000398020 Q6ZN92 141 aa16.62■□□□□ 0.25
TMEM55B-202ENST00000398020 TEX43Q6ZNM6 134 aa16.62■□□□□ 0.25
TMEM55B-202ENST00000398020 A0A096LNJ9 63 aa16.61■□□□□ 0.25
TMEM55B-202ENST00000398020 NUPR1O60356 82 aa16.61■□□□□ 0.25
TMEM55B-202ENST00000398020 PRSS1P07477 247 aa16.61■□□□□ 0.25
TMEM55B-202ENST00000398020 LINC00310P59036 64 aa16.61■□□□□ 0.25
TMEM55B-202ENST00000398020 CDPF1Q6NVV7 123 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms