RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 C11orf72Q8NBR9 251 aa6.71□□□□□ -1.33
UCA1-201ENST00000397381 ZNF625Q96I27 306 aaPredicted RBP6.71□□□□□ -1.33
UCA1-201ENST00000397381 CSDC2Q9Y534 153 aaKnown RBP6.71□□□□□ -1.33
UCA1-201ENST00000397381 RBMY1BA6NDE4 496 aaKnown RBP6.71□□□□□ -1.34
UCA1-201ENST00000397381 RBMY1EA6NEQ0 496 aaKnown RBP6.71□□□□□ -1.34
UCA1-201ENST00000397381 C19orf84I3L1E1 186 aa6.71□□□□□ -1.34
UCA1-201ENST00000397381 RBMY1DP0C7P1 496 aaKnown RBP6.71□□□□□ -1.34
UCA1-201ENST00000397381 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.34
UCA1-201ENST00000397381 Q8N2B8 174 aa6.71□□□□□ -1.34
UCA1-201ENST00000397381 UBE2E2Q96LR5 201 aa6.71□□□□□ -1.34
UCA1-201ENST00000397381 CCL19Q99731 98 aa6.71□□□□□ -1.34
UCA1-201ENST00000397381 OVOL2Q9BRP0 275 aa6.71□□□□□ -1.34
UCA1-201ENST00000397381 IGHV4-59P01825 116 aa6.7□□□□□ -1.34
UCA1-201ENST00000397381 LINC00526Q96FQ7 95 aa6.7□□□□□ -1.34
UCA1-201ENST00000397381 IGHV4-30-2A0A087WSY4 118 aa6.7□□□□□ -1.34
UCA1-201ENST00000397381 TRAV13-2A0A0B4J235 113 aa6.7□□□□□ -1.34
UCA1-201ENST00000397381 B4DSR2 109 aa6.7□□□□□ -1.34
UCA1-201ENST00000397381 NDUFA7O95182 113 aa6.7□□□□□ -1.34
UCA1-201ENST00000397381 A0A0U1RRA0 63 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 AVPP01185 164 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 INSP01308 110 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 HIST2H2BCQ6DN03 193 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 C22orf24Q9Y442 160 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 PRM2P04554 102 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
UCA1-201ENST00000397381 ATP5J2P56134 94 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 VPREB3Q9UKI3 123 aa6.69□□□□□ -1.34
UCA1-201ENST00000397381 HIVEP3Q5T1R4 2406 aa6.68□□□□□ -1.34
UCA1-201ENST00000397381 F5H768 121 aa6.68□□□□□ -1.34
UCA1-201ENST00000397381 MALP21145 153 aa6.68□□□□□ -1.34
UCA1-201ENST00000397381 TRBV10-1A0A0K0K1A3 114 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 C3orf56Q8N813 242 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 FAM218AQ96MZ4 157 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 ASH1LQ9NR48 2969 aaKnown RBP6.67□□□□□ -1.34
UCA1-201ENST00000397381 AKAP6Q13023 2319 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 ATOX1O00244 68 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 CRPP02741 224 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 COX7CP15954 63 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 RPL36AP83881 106 aaKnown RBP6.67□□□□□ -1.34
UCA1-201ENST00000397381 GAGE2AQ6NT46 116 aa6.67□□□□□ -1.34
UCA1-201ENST00000397381 RPL36ALQ969Q0 106 aaKnown RBP6.67□□□□□ -1.34
UCA1-201ENST00000397381 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
UCA1-201ENST00000397381 LINC00694P0DN24 101 aa6.66□□□□□ -1.34
UCA1-201ENST00000397381 HIST1H4AP62805 103 aaKnown RBP6.66□□□□□ -1.34
UCA1-201ENST00000397381 MAP6D1Q9H9H5 199 aa6.66□□□□□ -1.34
UCA1-201ENST00000397381 CDC42SE2Q9NRR3 84 aa6.66□□□□□ -1.34
UCA1-201ENST00000397381 MUC6Q6W4X9 2439 aa6.66□□□□□ -1.34
UCA1-201ENST00000397381 ATRXP46100 2492 aa6.65□□□□□ -1.34
UCA1-201ENST00000397381 SORL1Q92673 2214 aa6.65□□□□□ -1.34
UCA1-201ENST00000397381 SLURP1P55000 103 aa6.65□□□□□ -1.34
UCA1-201ENST00000397381 DSCR9P59020 149 aa6.65□□□□□ -1.34
UCA1-201ENST00000397381 NRGNQ92686 78 aa6.65□□□□□ -1.34
UCA1-201ENST00000397381 ZNF702PQ9H963 129 aa6.65□□□□□ -1.34
UCA1-201ENST00000397381 A0A1B0GX51 115 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 H0YGX0 51 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 J3QLI3 93 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 K7EQD1 137 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 CRYGAP11844 174 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 LRRC75A-AS1Q8N1F1 130 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 IL17DQ8TAD2 202 aa6.65□□□□□ -1.35
UCA1-201ENST00000397381 DNAL4O96015 105 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 Q6JHZ5 121 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 LINC01356Q8N9X3 169 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 COX7B2Q8TF08 81 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 DYNLRB2Q8TF09 96 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 Q9HAA7 133 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
UCA1-201ENST00000397381 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
UCA1-201ENST00000397381 J3KT08 172 aa6.63□□□□□ -1.35
UCA1-201ENST00000397381 OBSCN-AS1Q96MR7 158 aa6.63□□□□□ -1.35
UCA1-201ENST00000397381 IGF2RP11717 2491 aa6.63□□□□□ -1.35
UCA1-201ENST00000397381 UBE2L6O14933 153 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 GNLYP22749 145 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 LINC00337Q8N6G1 96 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 Q96MF0 132 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 TMEM243Q9BU79 118 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 SVEP1Q4LDE5 3571 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 IGKV2-28A0A075B6P5 120 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 IGKV2D-28P01615 120 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
UCA1-201ENST00000397381 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
UCA1-201ENST00000397381 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
UCA1-201ENST00000397381 DEFB136Q30KP8 78 aa6.61□□□□□ -1.35
UCA1-201ENST00000397381 DEFB114Q30KQ6 69 aa6.61□□□□□ -1.35
UCA1-201ENST00000397381 Q6YL49 198 aa6.61□□□□□ -1.35
UCA1-201ENST00000397381 SMIM11BQ8TCY0 68 aa6.61□□□□□ -1.35
UCA1-201ENST00000397381 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.61□□□□□ -1.35
UCA1-201ENST00000397381 C4orf3Q8WVX3 66 aa6.61□□□□□ -1.35
UCA1-201ENST00000397381 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
UCA1-201ENST00000397381 KLK5Q9Y337 293 aaPredicted RBP6.61□□□□□ -1.35
UCA1-201ENST00000397381 A0A087WYN8 130 aa6.6□□□□□ -1.35
UCA1-201ENST00000397381 C18orf65Q6ZTR6 163 aa6.6□□□□□ -1.35
UCA1-201ENST00000397381 C1orf158Q8N1D5 194 aa6.6□□□□□ -1.35
UCA1-201ENST00000397381 RELNP78509 3460 aa6.6□□□□□ -1.35
UCA1-201ENST00000397381 IBA57-AS1B1ANH7 110 aa6.6□□□□□ -1.35
UCA1-201ENST00000397381 LINC00158P58513 81 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms