RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FAM104AQ969W3 186 aa10.51□□□□□ -0.73
CAPN3-207ENST00000397200 C12orf74Q32Q52 190 aa10.5□□□□□ -0.73
CAPN3-207ENST00000397200 AMELXQ99217 191 aa10.5□□□□□ -0.73
CAPN3-207ENST00000397200 CIDEAO60543 219 aa10.49□□□□□ -0.73
CAPN3-207ENST00000397200 NANOS2P60321 138 aaKnown RBP10.49□□□□□ -0.73
CAPN3-207ENST00000397200 ZNRF2Q8NHG8 242 aa10.49□□□□□ -0.73
CAPN3-207ENST00000397200 ZNF479Q96JC4 524 aa10.49□□□□□ -0.73
CAPN3-207ENST00000397200 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
CAPN3-207ENST00000397200 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
CAPN3-207ENST00000397200 K7EQD1 137 aa10.48□□□□□ -0.73
CAPN3-207ENST00000397200 TAL2Q16559 108 aa10.48□□□□□ -0.73
CAPN3-207ENST00000397200 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
CAPN3-207ENST00000397200 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 HERVK_113P61574 105 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 Q6ZVH6 145 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 OPRPNQ99935 248 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-207ENST00000397200 UBE2D4Q9Y2X8 147 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 TRBV7-3A0A075B6L6 115 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 A6NDN8 102 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 ATP5G1P05496 136 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 COTL1Q14019 142 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
CAPN3-207ENST00000397200 Q6ZTC4 211 aa10.46□□□□□ -0.74
CAPN3-207ENST00000397200 TIMM21Q9BVV7 248 aa10.46□□□□□ -0.74
CAPN3-207ENST00000397200 STAB2Q8WWQ8 2551 aa10.46□□□□□ -0.74
CAPN3-207ENST00000397200 H3BRM9 83 aa10.45□□□□□ -0.74
CAPN3-207ENST00000397200 HTN3P15516 51 aa10.45□□□□□ -0.74
CAPN3-207ENST00000397200 VCX2Q9H322 139 aa10.45□□□□□ -0.74
CAPN3-207ENST00000397200 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
CAPN3-207ENST00000397200 UBE2D3P61077 147 aa10.44□□□□□ -0.74
CAPN3-207ENST00000397200 UBE2D2P62837 147 aa10.44□□□□□ -0.74
CAPN3-207ENST00000397200 MRPS36P82909 103 aaKnown RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 RPL36AP83881 106 aaKnown RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 CEND1Q8N111 149 aa10.44□□□□□ -0.74
CAPN3-207ENST00000397200 RPL36ALQ969Q0 106 aaKnown RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 TMEM223A0PJW6 202 aa10.44□□□□□ -0.74
CAPN3-207ENST00000397200 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 DAZ4Q86SG3 579 aaKnown RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 SLC25A29Q8N8R3 303 aa10.44□□□□□ -0.74
CAPN3-207ENST00000397200 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 DAZ3Q9NR90 486 aaKnown RBP10.44□□□□□ -0.74
CAPN3-207ENST00000397200 IGHV3-38A0A0C4DH36 116 aa10.43□□□□□ -0.74
CAPN3-207ENST00000397200 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
CAPN3-207ENST00000397200 F5H768 121 aa10.43□□□□□ -0.74
CAPN3-207ENST00000397200 FXYD2P54710 66 aa10.43□□□□□ -0.74
CAPN3-207ENST00000397200 FHL2Q14192 279 aa10.43□□□□□ -0.74
CAPN3-207ENST00000397200 TRAV10A0A0B4J240 114 aa10.42□□□□□ -0.74
CAPN3-207ENST00000397200 ZNF815PA8K554 130 aa10.42□□□□□ -0.74
CAPN3-207ENST00000397200 TSPEAR-AS2P59090 65 aa10.42□□□□□ -0.74
CAPN3-207ENST00000397200 TMEM170BQ5T4T1 132 aa10.42□□□□□ -0.74
CAPN3-207ENST00000397200 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-207ENST00000397200 DEFB131BA0A096LNP1 70 aa10.41□□□□□ -0.74
CAPN3-207ENST00000397200 A0A0J9YXV3 536 aa10.41□□□□□ -0.74
CAPN3-207ENST00000397200 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-207ENST00000397200 GCSHP23434 173 aa10.41□□□□□ -0.74
CAPN3-207ENST00000397200 Q6ZUT4 128 aa10.41□□□□□ -0.74
CAPN3-207ENST00000397200 LEPROTO15243 131 aa10.4□□□□□ -0.74
CAPN3-207ENST00000397200 LINC00694P0DN24 101 aa10.4□□□□□ -0.74
CAPN3-207ENST00000397200 UBE2V1Q13404 147 aa10.4□□□□□ -0.74
CAPN3-207ENST00000397200 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-207ENST00000397200 GTSF1LQ9H1H1 148 aa10.4□□□□□ -0.74
CAPN3-207ENST00000397200 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
CAPN3-207ENST00000397200 TINCRA0A1B0GVN0 87 aa10.4□□□□□ -0.75
CAPN3-207ENST00000397200 C9orf118A6NHY6 69 aa10.4□□□□□ -0.75
CAPN3-207ENST00000397200 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.75
CAPN3-207ENST00000397200 OR5A1Q8NGJ0 315 aa10.4□□□□□ -0.75
CAPN3-207ENST00000397200 PRO0255Q9UI72 69 aa10.4□□□□□ -0.75
CAPN3-207ENST00000397200 TGP01266 2768 aa10.39□□□□□ -0.75
CAPN3-207ENST00000397200 J3QQQ9 107 aa10.39□□□□□ -0.75
CAPN3-207ENST00000397200 K7EP13 123 aa10.39□□□□□ -0.75
CAPN3-207ENST00000397200 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
CAPN3-207ENST00000397200 A0A0J9YY99 117 aa10.38□□□□□ -0.75
CAPN3-207ENST00000397200 FAM19A3Q7Z5A8 133 aa10.38□□□□□ -0.75
CAPN3-207ENST00000397200 SPANXB1Q9NS25 103 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-207ENST00000397200 TRAV26-1A0A087WT03 109 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 CCL25O15444 150 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 PAX4O43316 350 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 UBE2D1P51668 147 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 GAGE4Q13068 117 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 GAGE5Q13069 117 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 HIST1H4GQ99525 98 aa10.37□□□□□ -0.75
CAPN3-207ENST00000397200 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
CAPN3-207ENST00000397200 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
CAPN3-207ENST00000397200 VAMP3Q15836 100 aa10.36□□□□□ -0.75
CAPN3-207ENST00000397200 SMAGPQ0VAQ4 97 aa10.36□□□□□ -0.75
CAPN3-207ENST00000397200 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
CAPN3-207ENST00000397200 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
CAPN3-207ENST00000397200 WWC2-AS2Q96NR7 200 aa10.36□□□□□ -0.75
CAPN3-207ENST00000397200 H7C423 109 aa10.35□□□□□ -0.75
CAPN3-207ENST00000397200 LGALS3P17931 250 aaKnown RBP10.35□□□□□ -0.75
CAPN3-207ENST00000397200 PTTG1IPP53801 180 aa10.35□□□□□ -0.75
CAPN3-207ENST00000397200 TIRAPP58753 221 aa10.35□□□□□ -0.75
CAPN3-207ENST00000397200 SCGB1D4Q6XE38 83 aa10.35□□□□□ -0.75
CAPN3-207ENST00000397200 LOC100131303A0A0U1RQF7 123 aa10.34□□□□□ -0.75
CAPN3-207ENST00000397200 GYPEP15421 78 aa10.34□□□□□ -0.75
CAPN3-207ENST00000397200 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
CAPN3-207ENST00000397200 NHP2Q9NX24 153 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms