RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PROK1P58294 105 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
TRIM40-207ENST00000396581 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
TRIM40-207ENST00000396581 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 LST1O00453 97 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 COX6CP09669 75 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
TRIM40-207ENST00000396581 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 YAE1D1Q9NRH1 226 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 TNFRSF18Q9Y5U5 241 aa9.68□□□□□ -0.86
TRIM40-207ENST00000396581 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
TRIM40-207ENST00000396581 FAM240AA0A1B0GVK7 77 aa9.67□□□□□ -0.86
TRIM40-207ENST00000396581 PRSS2P07478 247 aa9.67□□□□□ -0.86
TRIM40-207ENST00000396581 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
TRIM40-207ENST00000396581 KRTAP1-1Q07627 177 aa9.67□□□□□ -0.86
TRIM40-207ENST00000396581 TIRAPP58753 221 aa9.66□□□□□ -0.86
TRIM40-207ENST00000396581 DNAJC30Q96LL9 226 aa9.65□□□□□ -0.86
TRIM40-207ENST00000396581 IGHV3-73A0A0B4J1V6 119 aa9.65□□□□□ -0.87
TRIM40-207ENST00000396581 NDUFA1O15239 70 aa9.65□□□□□ -0.87
TRIM40-207ENST00000396581 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.87
TRIM40-207ENST00000396581 Q6ZSN1 163 aa9.65□□□□□ -0.87
TRIM40-207ENST00000396581 LINC00467Q9BRT7 94 aa9.65□□□□□ -0.87
TRIM40-207ENST00000396581 Q9UF83 564 aa9.65□□□□□ -0.87
TRIM40-207ENST00000396581 MTORP42345 2549 aa9.65□□□□□ -0.87
TRIM40-207ENST00000396581 A8MZ25 164 aa9.64□□□□□ -0.87
TRIM40-207ENST00000396581 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
TRIM40-207ENST00000396581 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
TRIM40-207ENST00000396581 C15orf53Q8NAA6 179 aa9.64□□□□□ -0.87
TRIM40-207ENST00000396581 ZNF702PQ9H963 129 aa9.64□□□□□ -0.87
TRIM40-207ENST00000396581 IGHV3-53P01767 116 aa9.63□□□□□ -0.87
TRIM40-207ENST00000396581 Q6ZSV7 163 aa9.63□□□□□ -0.87
TRIM40-207ENST00000396581 Q8N2B8 174 aa9.63□□□□□ -0.87
TRIM40-207ENST00000396581 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
TRIM40-207ENST00000396581 AKAP9Q99996 3911 aa9.63□□□□□ -0.87
TRIM40-207ENST00000396581 RBMY1BA6NDE4 496 aaKnown RBP9.63□□□□□ -0.87
TRIM40-207ENST00000396581 RBMY1EA6NEQ0 496 aaKnown RBP9.63□□□□□ -0.87
TRIM40-207ENST00000396581 RBMY1DP0C7P1 496 aaKnown RBP9.63□□□□□ -0.87
TRIM40-207ENST00000396581 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
TRIM40-207ENST00000396581 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.62□□□□□ -0.87
TRIM40-207ENST00000396581 IGKV2-29A2NJV5 120 aaPredicted RBP9.62□□□□□ -0.87
TRIM40-207ENST00000396581 KNCNA6PVL3 124 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 BEAN1Q3B7T3 259 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 TTC32Q5I0X7 151 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 C11orf72Q8NBR9 251 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 CLEC2BQ92478 149 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 CITED2Q99967 270 aaPredicted RBP9.62□□□□□ -0.87
TRIM40-207ENST00000396581 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
TRIM40-207ENST00000396581 NACAE9PAV3 2078 aa9.61□□□□□ -0.87
TRIM40-207ENST00000396581 DEFB131AP59861 70 aa9.61□□□□□ -0.87
TRIM40-207ENST00000396581 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.61□□□□□ -0.87
TRIM40-207ENST00000396581 DUX3Q96PT4 197 aa9.61□□□□□ -0.87
TRIM40-207ENST00000396581 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 GAGE7O76087 117 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 GAGE4Q13068 117 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 RS1O15537 224 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
TRIM40-207ENST00000396581 HIVEP2P31629 2446 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 B5MCH6 92 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 HTN1P15515 57 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 NPC2P61916 151 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 NF1P21359 2839 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 TRBV7-7A0A0K0K1E9 115 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 PRM2P04554 102 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 CIRBPQ14011 172 aaKnown RBP9.59□□□□□ -0.87
TRIM40-207ENST00000396581 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
TRIM40-207ENST00000396581 HERVK_113P63121 156 aa9.58□□□□□ -0.88
TRIM40-207ENST00000396581 OTOGQ6ZRI0 2925 aa9.58□□□□□ -0.88
TRIM40-207ENST00000396581 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 CCDC179H3BU77 68 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 SHISA2Q6UWI4 295 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 DNAJC9-AS1A6NH13 148 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 COX7A2LO14548 114 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 COX6A2Q02221 97 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 LINC00242Q5T6M2 205 aa9.57□□□□□ -0.88
TRIM40-207ENST00000396581 CSDC2Q9Y534 153 aaKnown RBP9.57□□□□□ -0.88
TRIM40-207ENST00000396581 IGHV3-38A0A0C4DH36 116 aa9.56□□□□□ -0.88
TRIM40-207ENST00000396581 ACYP1P07311 99 aa9.56□□□□□ -0.88
TRIM40-207ENST00000396581 DAND5Q8N907 189 aa9.56□□□□□ -0.88
TRIM40-207ENST00000396581 COPS9Q8WXC6 57 aa9.55□□□□□ -0.88
TRIM40-207ENST00000396581 Q9H8V8 135 aa9.55□□□□□ -0.88
TRIM40-207ENST00000396581 ESM1Q9NQ30 184 aa9.55□□□□□ -0.88
TRIM40-207ENST00000396581 SLURP1P55000 103 aa9.55□□□□□ -0.88
TRIM40-207ENST00000396581 SMIM1B2RUZ4 78 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 SOSTDC1Q6X4U4 206 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 IL17DQ8TAD2 202 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 ZNF625Q96I27 306 aaPredicted RBP9.54□□□□□ -0.88
TRIM40-207ENST00000396581 IMUPQ9GZP8 106 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 LINC01587Q99440 93 aa9.54□□□□□ -0.88
TRIM40-207ENST00000396581 FLNBO75369 2602 aaKnown RBP9.54□□□□□ -0.88
TRIM40-207ENST00000396581 CUBNO60494 3623 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms