RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 APCP25054 2843 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 NXPH4O95158 308 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 TRBV12-3P01733 135 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 RPL28P46779 137 aaKnown RBP7.14□□□□□ -1.27
CDRT1-204ENST00000395906 SS18Q15532 418 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 Q8N2B8 174 aa7.14□□□□□ -1.27
CDRT1-204ENST00000395906 IGHV4OR15-8A0A075B7B6 117 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 A0A087WW49 117 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.13□□□□□ -1.27
CDRT1-204ENST00000395906 BCE1O60756 84 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 ATP5EP56381 51 aaPredicted RBP7.13□□□□□ -1.27
CDRT1-204ENST00000395906 RBM3P98179 157 aaKnown RBP7.13□□□□□ -1.27
CDRT1-204ENST00000395906 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 ATP5EP2Q5VTU8 51 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 MALRD1Q5VYJ5 2156 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 TRAV23DV6A0A075B6W5 121 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 A0A0J9YXV3 536 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 HILS1P60008 231 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 Q96MF0 132 aa7.13□□□□□ -1.27
CDRT1-204ENST00000395906 ANKRD17O75179 2603 aaKnown RBP7.12□□□□□ -1.27
CDRT1-204ENST00000395906 TRBV27A0A0K0K1C4 114 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 CFHR3Q02985 330 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 DEFB108BQ8NET1 73 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 CCL13Q99616 98 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 TRAV7A0A075B6U4 112 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 IGHV1-58A0A0C4DH39 117 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 C19orf84I3L1E1 186 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 LY6HO94772 140 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 S100A7L2Q5SY68 101 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 C14orf132Q9NPU4 83 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 PHLDA3Q9Y5J5 127 aa7.12□□□□□ -1.27
CDRT1-204ENST00000395906 OBSCN-AS1Q96MR7 158 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 OPRPNQ99935 248 aaPredicted RBP7.11□□□□□ -1.27
CDRT1-204ENST00000395906 ABCA1O95477 2261 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 IGHV3-72A0A0B4J1Y9 119 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 E7EQL1 145 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 LYNX1G3V0Z9 82 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 BUB1B-PAK6H3BSN5 160 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 LYNX1P0DP58 116 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 Q6ZRU5 148 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 LAMTOR3Q9UHA4 124 aa7.11□□□□□ -1.27
CDRT1-204ENST00000395906 CSPG4Q6UVK1 2322 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 MED14OSP0DP75 135 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 S100A4P26447 101 aaKnown RBP7.1□□□□□ -1.27
CDRT1-204ENST00000395906 SNRPD3P62318 126 aaKnown RBP7.1□□□□□ -1.27
CDRT1-204ENST00000395906 FAM218AQ96MZ4 157 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 CUBNO60494 3623 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDRT1-204ENST00000395906 A0A1W2PPR1 153 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 CCL3L1P16619 93 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
CDRT1-204ENST00000395906 F8WEM9 126 aa7.09□□□□□ -1.27
CDRT1-204ENST00000395906 IGHV1-46P01743 117 aa7.09□□□□□ -1.27
CDRT1-204ENST00000395906 CCL17Q92583 94 aa7.09□□□□□ -1.27
CDRT1-204ENST00000395906 PLAC8L1A1L4L8 177 aa7.09□□□□□ -1.28
CDRT1-204ENST00000395906 NDUFC1O43677 76 aa7.09□□□□□ -1.28
CDRT1-204ENST00000395906 C9orf47Q6ZRZ4 202 aa7.09□□□□□ -1.28
CDRT1-204ENST00000395906 ITLN2Q8WWU7 325 aaPredicted RBP7.09□□□□□ -1.28
CDRT1-204ENST00000395906 OVOL2Q9BRP0 275 aa7.09□□□□□ -1.28
CDRT1-204ENST00000395906 Q9HAA7 133 aa7.09□□□□□ -1.28
CDRT1-204ENST00000395906 TEX15Q9BXT5 2789 aa7.08□□□□□ -1.28
CDRT1-204ENST00000395906 IGLV3-9A0A075B6K5 115 aa7.08□□□□□ -1.28
CDRT1-204ENST00000395906 TRBV10-3A0A0K0K1G6 114 aa7.08□□□□□ -1.28
CDRT1-204ENST00000395906 NDPQ00604 133 aa7.08□□□□□ -1.28
CDRT1-204ENST00000395906 S4R3C0 116 aa7.08□□□□□ -1.28
CDRT1-204ENST00000395906 IGLV4-3A0A075B6K6 122 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 SOCS3O14543 225 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 LINC00315P59091 139 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 SUMO4Q6EEV6 95 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 LINC00308Q8TCZ7 52 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 MRPL53Q96EL3 112 aaKnown RBP7.07□□□□□ -1.28
CDRT1-204ENST00000395906 MOB4Q9Y3A3 225 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 KIF25-AS1Q9Y6Z4 181 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 TRBV6-5A0A0K0K1A5 114 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 SAA4P35542 130 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 ZNF843Q8N446 348 aa7.07□□□□□ -1.28
CDRT1-204ENST00000395906 MXRA5Q9NR99 2828 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 TRAV13-2A0A0B4J235 113 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 BLCAPP62952 87 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
CDRT1-204ENST00000395906 PRR9Q5T870 116 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 MPLKIPQ8TAP9 179 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 RMI2Q96E14 147 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 LENEPQ9Y5L5 61 aa7.06□□□□□ -1.28
CDRT1-204ENST00000395906 ACANP16112 2415 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 F8W735 103 aaPredicted RBP7.05□□□□□ -1.28
CDRT1-204ENST00000395906 RNASE4P34096 147 aaKnown RBP7.05□□□□□ -1.28
CDRT1-204ENST00000395906 PRB3Q04118 309 aaPredicted RBP7.05□□□□□ -1.28
CDRT1-204ENST00000395906 C20orf203Q8NBC4 194 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 WFDC9Q8NEX5 89 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 BPESC1Q9GZL8 116 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 SONP18583 2426 aaKnown RBP7.05□□□□□ -1.28
CDRT1-204ENST00000395906 TRAV21A0A0B4J279 112 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 PAX4O43316 350 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 FBXL19-AS1Q494R0 122 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 ENHOQ6UWT2 76 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 SNURFQ9Y675 71 aa7.05□□□□□ -1.28
CDRT1-204ENST00000395906 IBA57-AS1B1ANH7 110 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms