RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NDUFA6P56556 154 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 SNRPEP62304 92 aaKnown RBP8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 SRSF9Q13242 221 aaKnown RBP eCLIP8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 SPINK6Q6UWN8 80 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 C9orf85Q96MD7 179 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 C11orf21Q9P2W6 132 aa8.53□□□□□ -1.04
VCPKMT-201ENST00000395859 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 GZMBP10144 247 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 S100A2P29034 98 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 TWIST1Q15672 202 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 C1orf43Q9BWL3 253 aa8.52□□□□□ -1.05
VCPKMT-201ENST00000395859 GAGE12JA6NER3 117 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 PMCHP20382 165 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 NTF3P20783 257 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 GAGE1Q13065 139 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 GAGE4Q13068 117 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 GAGE5Q13069 117 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 GAGE13Q4V321 117 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 TMEM18Q96B42 140 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 ALKBH7Q9BT30 221 aaPredicted RBP8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 PHLDA3Q9Y5J5 127 aa8.51□□□□□ -1.05
VCPKMT-201ENST00000395859 TMSB15BA0A087X1C1 80 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 A8MWV9 139 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 RNASE3P12724 160 aaKnown RBP8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 RAB4AP20338 218 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 ZFP2Q6ZN57 461 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 C7orf33Q8WU49 177 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 TPPP3Q9BW30 176 aa8.5□□□□□ -1.05
VCPKMT-201ENST00000395859 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
VCPKMT-201ENST00000395859 HIST3H2BBQ8N257 126 aa8.49□□□□□ -1.05
VCPKMT-201ENST00000395859 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
VCPKMT-201ENST00000395859 AP1S3Q96PC3 154 aa8.49□□□□□ -1.05
VCPKMT-201ENST00000395859 SAMD10Q9BYL1 202 aa8.49□□□□□ -1.05
VCPKMT-201ENST00000395859 GRIFINA4D1Z8 144 aa8.48□□□□□ -1.05
VCPKMT-201ENST00000395859 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
VCPKMT-201ENST00000395859 K7EMI3 77 aa8.48□□□□□ -1.05
VCPKMT-201ENST00000395859 SLPIP03973 132 aa8.48□□□□□ -1.05
VCPKMT-201ENST00000395859 UFSP1Q6NVU6 142 aa8.48□□□□□ -1.05
VCPKMT-201ENST00000395859 C18orf32Q8TCD1 76 aa8.48□□□□□ -1.05
VCPKMT-201ENST00000395859 H3BVH4 76 aa8.47□□□□□ -1.05
VCPKMT-201ENST00000395859 M0R381 172 aa8.47□□□□□ -1.05
VCPKMT-201ENST00000395859 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
VCPKMT-201ENST00000395859 A0A087WX48 190 aa8.46□□□□□ -1.06
VCPKMT-201ENST00000395859 RHODO00212 210 aa8.46□□□□□ -1.06
VCPKMT-201ENST00000395859 SMIM17P0DL12 118 aa8.46□□□□□ -1.06
VCPKMT-201ENST00000395859 OR10AG1Q8NH19 301 aa8.46□□□□□ -1.06
VCPKMT-201ENST00000395859 CKS2P33552 79 aa8.45□□□□□ -1.06
VCPKMT-201ENST00000395859 AKR1D1P51857 326 aa8.45□□□□□ -1.06
VCPKMT-201ENST00000395859 C14orf178Q8N769 122 aaPredicted RBP8.45□□□□□ -1.06
VCPKMT-201ENST00000395859 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
VCPKMT-201ENST00000395859 NXT2Q9NPJ8 142 aaKnown RBP8.45□□□□□ -1.06
VCPKMT-201ENST00000395859 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 LINC00614P0C842 121 aa8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 RPL32P62910 135 aaKnown RBP8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 KIAA1644Q3SXP7 199 aa8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 C20orf78Q9BR46 151 aa8.44□□□□□ -1.06
VCPKMT-201ENST00000395859 MUC21A0A0G2JKD1 596 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 HSBP1O75506 76 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 SERF1AO75920 110 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 G0S2P27469 103 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 MIAQ16674 131 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 MAP1LC3AQ9H492 121 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 PRR34Q9NV39 138 aa8.43□□□□□ -1.06
VCPKMT-201ENST00000395859 D6R8Y8 96 aa8.42□□□□□ -1.06
VCPKMT-201ENST00000395859 H7C1H1 209 aa8.42□□□□□ -1.06
VCPKMT-201ENST00000395859 TCAPO15273 167 aa8.42□□□□□ -1.06
VCPKMT-201ENST00000395859 AP5S1Q9NUS5 200 aa8.42□□□□□ -1.06
VCPKMT-201ENST00000395859 CRPP02741 224 aa8.41□□□□□ -1.06
VCPKMT-201ENST00000395859 FABP4P15090 132 aa8.41□□□□□ -1.06
VCPKMT-201ENST00000395859 MPV17L2Q567V2 206 aa8.41□□□□□ -1.06
VCPKMT-201ENST00000395859 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
VCPKMT-201ENST00000395859 JPT2Q9H910 190 aa8.41□□□□□ -1.06
VCPKMT-201ENST00000395859 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.06
VCPKMT-201ENST00000395859 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
VCPKMT-201ENST00000395859 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
VCPKMT-201ENST00000395859 FA2HQ7L5A8 372 aa8.4□□□□□ -1.06
VCPKMT-201ENST00000395859 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
VCPKMT-201ENST00000395859 AMTP48728 403 aa8.39□□□□□ -1.07
VCPKMT-201ENST00000395859 RPL36AP83881 106 aaKnown RBP8.39□□□□□ -1.07
VCPKMT-201ENST00000395859 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
VCPKMT-201ENST00000395859 RPL36ALQ969Q0 106 aaKnown RBP8.39□□□□□ -1.07
VCPKMT-201ENST00000395859 HSPB8Q9UJY1 196 aa8.39□□□□□ -1.07
VCPKMT-201ENST00000395859 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
VCPKMT-201ENST00000395859 LINC00310P59036 64 aa8.38□□□□□ -1.07
VCPKMT-201ENST00000395859 RNASEKQ6P5S7 137 aaKnown RBP8.38□□□□□ -1.07
VCPKMT-201ENST00000395859 LINC00518Q8N0U6 118 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms