RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 SCGB1D4Q6XE38 83 aa12.94□□□□□ -0.34
SREBF1-204ENST00000395756 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
SREBF1-204ENST00000395756 TRRAPQ9Y4A5 3859 aa12.94□□□□□ -0.34
SREBF1-204ENST00000395756 ZNF815PA8K554 130 aa12.93□□□□□ -0.34
SREBF1-204ENST00000395756 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
SREBF1-204ENST00000395756 MYMXA0A1B0GTQ4 84 aa12.92□□□□□ -0.34
SREBF1-204ENST00000395756 NDUFV3P56181 108 aaKnown RBP12.92□□□□□ -0.34
SREBF1-204ENST00000395756 TMEM141Q96I45 108 aa12.92□□□□□ -0.34
SREBF1-204ENST00000395756 SPATA3Q8NHX4 192 aa12.92□□□□□ -0.34
SREBF1-204ENST00000395756 TIMM17AQ99595 171 aa12.92□□□□□ -0.34
SREBF1-204ENST00000395756 VCX2Q9H322 139 aa12.92□□□□□ -0.34
SREBF1-204ENST00000395756 A0A0J9YXV3 536 aa12.91□□□□□ -0.34
SREBF1-204ENST00000395756 IGLV1-51P01701 117 aa12.91□□□□□ -0.34
SREBF1-204ENST00000395756 PLEKHB2Q96CS7 222 aa12.91□□□□□ -0.34
SREBF1-204ENST00000395756 MEIG1Q5JSS6 88 aa12.91□□□□□ -0.34
SREBF1-204ENST00000395756 A4D1N5 150 aa12.9□□□□□ -0.34
SREBF1-204ENST00000395756 SMCPP49901 116 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-204ENST00000395756 GAGE2BQ13066 116 aa12.9□□□□□ -0.34
SREBF1-204ENST00000395756 GAGE2EQ4V326 116 aa12.9□□□□□ -0.34
SREBF1-204ENST00000395756 GAGE2DQ9UEU5 116 aa12.9□□□□□ -0.34
SREBF1-204ENST00000395756 GIG44P09565 113 aaPredicted RBP12.9□□□□□ -0.34
SREBF1-204ENST00000395756 RHOHQ15669 191 aa12.9□□□□□ -0.34
SREBF1-204ENST00000395756 C12orf74Q32Q52 190 aa12.89□□□□□ -0.35
SREBF1-204ENST00000395756 CEND1Q8N111 149 aa12.89□□□□□ -0.35
SREBF1-204ENST00000395756 IGLV4-3A0A075B6K6 122 aa12.88□□□□□ -0.35
SREBF1-204ENST00000395756 CARD19Q96LW7 228 aa12.88□□□□□ -0.35
SREBF1-204ENST00000395756 CSDC2Q9Y534 153 aaKnown RBP12.88□□□□□ -0.35
SREBF1-204ENST00000395756 HIGD1BQ9P298 99 aa12.88□□□□□ -0.35
SREBF1-204ENST00000395756 TSPEAR-AS2P59090 65 aa12.87□□□□□ -0.35
SREBF1-204ENST00000395756 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
SREBF1-204ENST00000395756 C5orf47Q569G3 176 aa12.87□□□□□ -0.35
SREBF1-204ENST00000395756 TRGV2A0A075B6R0 118 aa12.87□□□□□ -0.35
SREBF1-204ENST00000395756 PSMB2P49721 201 aa12.87□□□□□ -0.35
SREBF1-204ENST00000395756 LINC00467Q9BRT7 94 aa12.86□□□□□ -0.35
SREBF1-204ENST00000395756 TRAV4A0A0B4J268 109 aa12.86□□□□□ -0.35
SREBF1-204ENST00000395756 HERVK_113P61574 105 aa12.86□□□□□ -0.35
SREBF1-204ENST00000395756 C19orf73Q9NVV2 129 aa12.86□□□□□ -0.35
SREBF1-204ENST00000395756 TEP1Q99973 2627 aaKnown RBP12.86□□□□□ -0.35
SREBF1-204ENST00000395756 RS1O15537 224 aa12.86□□□□□ -0.35
SREBF1-204ENST00000395756 LOC107984156A0A0G2JMH3 177 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 IFITM1P13164 125 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 ARL17AQ8IVW1 177 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 RHODO00212 210 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 NDUFA7O95182 113 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 RRN3P1Q2M238 152 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 BEAN1Q3B7T3 259 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 F8P00451 2351 aa12.85□□□□□ -0.35
SREBF1-204ENST00000395756 MRPL23Q16540 153 aaKnown RBP12.84□□□□□ -0.35
SREBF1-204ENST00000395756 LOC107984640A0A0U1RRK4 108 aa12.84□□□□□ -0.35
SREBF1-204ENST00000395756 CRLF1O75462 422 aa12.84□□□□□ -0.35
SREBF1-204ENST00000395756 TMEM263Q8WUH6 116 aaKnown RBP12.84□□□□□ -0.35
SREBF1-204ENST00000395756 CHCHD7Q9BUK0 85 aa12.83□□□□□ -0.35
SREBF1-204ENST00000395756 LINC01549A6NIU2 74 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 SNCGO76070 127 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 PAPPA-AS1Q5QFB9 102 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 DGAT2L7PQ6IED9 249 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 LINC00482Q8N8I6 264 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 SLC25A29Q8N8R3 303 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 PPDPFLQ8WWR9 84 aa12.83□□□□□ -0.36
SREBF1-204ENST00000395756 LOC100131303A0A0U1RQF7 123 aa12.82□□□□□ -0.36
SREBF1-204ENST00000395756 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
SREBF1-204ENST00000395756 A8MZ25 164 aa12.82□□□□□ -0.36
SREBF1-204ENST00000395756 FAM104AQ969W3 186 aa12.82□□□□□ -0.36
SREBF1-204ENST00000395756 LGALS3P17931 250 aaKnown RBP12.81□□□□□ -0.36
SREBF1-204ENST00000395756 J3QQQ9 107 aa12.81□□□□□ -0.36
SREBF1-204ENST00000395756 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
SREBF1-204ENST00000395756 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
SREBF1-204ENST00000395756 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
SREBF1-204ENST00000395756 NDUFA11Q86Y39 141 aa12.8□□□□□ -0.36
SREBF1-204ENST00000395756 TRBV7-3A0A075B6L6 115 aa12.8□□□□□ -0.36
SREBF1-204ENST00000395756 UBE2D4Q9Y2X8 147 aa12.8□□□□□ -0.36
SREBF1-204ENST00000395756 ATP6V0E2Q8NHE4 81 aa12.79□□□□□ -0.36
SREBF1-204ENST00000395756 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
SREBF1-204ENST00000395756 CMC4P56277 68 aaPredicted RBP12.78□□□□□ -0.36
SREBF1-204ENST00000395756 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
SREBF1-204ENST00000395756 PIK3CD-AS1Q5SR53 167 aa12.78□□□□□ -0.36
SREBF1-204ENST00000395756 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
SREBF1-204ENST00000395756 TMEM223A0PJW6 202 aa12.77□□□□□ -0.36
SREBF1-204ENST00000395756 PLAC8L1A1L4L8 177 aa12.77□□□□□ -0.36
SREBF1-204ENST00000395756 K7EQD1 137 aa12.77□□□□□ -0.36
SREBF1-204ENST00000395756 CSNK1G2-AS1Q8NCQ2 148 aa12.77□□□□□ -0.36
SREBF1-204ENST00000395756 TRGV4A0A0C4DH28 118 aa12.77□□□□□ -0.37
SREBF1-204ENST00000395756 DEFB4AO15263 64 aa12.77□□□□□ -0.37
SREBF1-204ENST00000395756 EDA2RQ9HAV5 297 aa12.77□□□□□ -0.37
SREBF1-204ENST00000395756 A0A0J9YY99 117 aa12.76□□□□□ -0.37
SREBF1-204ENST00000395756 TEN1Q86WV5 123 aa12.76□□□□□ -0.37
SREBF1-204ENST00000395756 IL17DQ8TAD2 202 aa12.76□□□□□ -0.37
SREBF1-204ENST00000395756 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
SREBF1-204ENST00000395756 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 DNAJC30Q96LL9 226 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 TRAV13-1A0A0B4J241 112 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-204ENST00000395756 IGKV3OR2-268A0A0C4DH90 116 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 NTM-AS1Q6ZSK4 140 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 AMELXQ99217 191 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 PYGO1Q9Y3Y4 419 aa12.75□□□□□ -0.37
SREBF1-204ENST00000395756 TAL2Q16559 108 aa12.74□□□□□ -0.37
SREBF1-204ENST00000395756 TMEM262E9PQX1 116 aa12.73□□□□□ -0.37
SREBF1-204ENST00000395756 ANKRD29Q8N6D5 301 aa12.73□□□□□ -0.37
SREBF1-204ENST00000395756 CHCHD5Q9BSY4 110 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms