RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 COX11Q9Y6N1 276 aa9.87□□□□□ -0.83
CDC42SE2-202ENST00000395246 CCDC168Q8NDH2 2452 aa9.87□□□□□ -0.83
CDC42SE2-202ENST00000395246 A0A0J9YXY3 114 aa9.87□□□□□ -0.83
CDC42SE2-202ENST00000395246 PLEKHB2Q96CS7 222 aa9.87□□□□□ -0.83
CDC42SE2-202ENST00000395246 Q6ZUT4 128 aa9.86□□□□□ -0.83
CDC42SE2-202ENST00000395246 TEP1Q99973 2627 aaKnown RBP9.86□□□□□ -0.83
CDC42SE2-202ENST00000395246 A0A0J9YY99 117 aa9.86□□□□□ -0.83
CDC42SE2-202ENST00000395246 H0Y8G0 127 aa9.86□□□□□ -0.83
CDC42SE2-202ENST00000395246 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
CDC42SE2-202ENST00000395246 OR11H2Q8NH07 326 aa9.86□□□□□ -0.83
CDC42SE2-202ENST00000395246 BAHCC1Q9P281 2608 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 HERVK_113P63121 156 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 ZFAND6Q6FIF0 208 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 Q6ZVH6 145 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 TMEM243Q9BU79 118 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 SPANXDQ9BXN6 97 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 SPANXCQ9NY87 97 aa9.85□□□□□ -0.83
CDC42SE2-202ENST00000395246 A0A1B0GV90 55 aa9.84□□□□□ -0.83
CDC42SE2-202ENST00000395246 FAM222AQ5U5X8 452 aa9.84□□□□□ -0.83
CDC42SE2-202ENST00000395246 SONP18583 2426 aaKnown RBP9.84□□□□□ -0.83
CDC42SE2-202ENST00000395246 TRGV2A0A075B6R0 118 aa9.83□□□□□ -0.84
CDC42SE2-202ENST00000395246 TM2D3Q9BRN9 247 aa9.83□□□□□ -0.84
CDC42SE2-202ENST00000395246 TLN2Q9Y4G6 2542 aa9.83□□□□□ -0.84
CDC42SE2-202ENST00000395246 J3QQQ9 107 aa9.83□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGKV2-29A2NJV5 120 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE2-202ENST00000395246 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
CDC42SE2-202ENST00000395246 A0A0J9YXV3 536 aa9.82□□□□□ -0.84
CDC42SE2-202ENST00000395246 NDUFA1O15239 70 aa9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGHV3-30P01768 117 aa9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGHV3-30-5P0DP03 117 aa9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 C2CD3Q4AC94 2353 aa9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 TRGV4A0A0C4DH28 118 aa9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 CELA1Q9UNI1 258 aa9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 HINT1P49773 126 aaPredicted RBP9.81□□□□□ -0.84
CDC42SE2-202ENST00000395246 LOC100131303A0A0U1RQF7 123 aa9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 A6NDN8 102 aa9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGHV3-30-3P0DP02 117 aa9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 ATP5G1P05496 136 aa9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
CDC42SE2-202ENST00000395246 GAGE12JA6NER3 117 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 C9orf118A6NHY6 69 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 GAGE4Q13068 117 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 GAGE5Q13069 117 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 GAGE13Q4V321 117 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 DNAH9Q9NYC9 4486 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 C12orf74Q32Q52 190 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 CEMP1Q6PRD7 247 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 C3orf56Q8N813 242 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 PRR34Q9NV39 138 aa9.79□□□□□ -0.84
CDC42SE2-202ENST00000395246 COX6A2Q02221 97 aa9.78□□□□□ -0.84
CDC42SE2-202ENST00000395246 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
CDC42SE2-202ENST00000395246 IGHV3-38A0A0C4DH36 116 aa9.78□□□□□ -0.84
CDC42SE2-202ENST00000395246 LOC107984156A0A0G2JMH3 177 aa9.78□□□□□ -0.84
CDC42SE2-202ENST00000395246 ARL17AQ8IVW1 177 aa9.78□□□□□ -0.84
CDC42SE2-202ENST00000395246 TTTY13Q9BZ97 58 aa9.77□□□□□ -0.84
CDC42SE2-202ENST00000395246 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
CDC42SE2-202ENST00000395246 TMEM101Q96IK0 257 aa9.77□□□□□ -0.85
CDC42SE2-202ENST00000395246 A0A087WZ39 114 aa9.76□□□□□ -0.85
CDC42SE2-202ENST00000395246 FXYD2P54710 66 aa9.76□□□□□ -0.85
CDC42SE2-202ENST00000395246 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
CDC42SE2-202ENST00000395246 LELP1Q5T871 98 aa9.76□□□□□ -0.85
CDC42SE2-202ENST00000395246 DNAH7Q8WXX0 4024 aa9.76□□□□□ -0.85
CDC42SE2-202ENST00000395246 GYPEP15421 78 aa9.75□□□□□ -0.85
CDC42SE2-202ENST00000395246 A0A096LPF7 62 aa9.75□□□□□ -0.85
CDC42SE2-202ENST00000395246 CDKN2A-AS1Q9UH64 79 aa9.75□□□□□ -0.85
CDC42SE2-202ENST00000395246 A0A0B4J2C4 111 aa9.74□□□□□ -0.85
CDC42SE2-202ENST00000395246 MAST4O15021 2626 aa9.74□□□□□ -0.85
CDC42SE2-202ENST00000395246 MTORP42345 2549 aa9.74□□□□□ -0.85
CDC42SE2-202ENST00000395246 DAD1P61803 113 aa9.74□□□□□ -0.85
CDC42SE2-202ENST00000395246 HERV-K104P63124 156 aa9.74□□□□□ -0.85
CDC42SE2-202ENST00000395246 PAX4O43316 350 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 IGLV4-60A0A075B6I1 120 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 IFITM1P13164 125 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 TMEM170BQ5T4T1 132 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 SORL1Q92673 2214 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 UBE2V1Q13404 147 aa9.73□□□□□ -0.85
CDC42SE2-202ENST00000395246 G3V4G9 280 aa9.72□□□□□ -0.85
CDC42SE2-202ENST00000395246 LINC00959A0A1B0GUT2 108 aa9.72□□□□□ -0.85
CDC42SE2-202ENST00000395246 LGALS3P17931 250 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-202ENST00000395246 KRTAP21-3Q3LHN1 58 aa9.72□□□□□ -0.85
CDC42SE2-202ENST00000395246 LINC00469Q8N7U9 141 aa9.72□□□□□ -0.85
CDC42SE2-202ENST00000395246 EIF4EBP3O60516 100 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE2-202ENST00000395246 SMIM13P0DJ93 91 aa9.71□□□□□ -0.85
CDC42SE2-202ENST00000395246 ICOSQ9Y6W8 199 aa9.71□□□□□ -0.85
CDC42SE2-202ENST00000395246 TMEM238C9JI98 176 aa9.71□□□□□ -0.86
CDC42SE2-202ENST00000395246 MIAQ16674 131 aa9.7□□□□□ -0.86
CDC42SE2-202ENST00000395246 NOTCH2Q04721 2471 aa9.7□□□□□ -0.86
CDC42SE2-202ENST00000395246 UBE2L6O14933 153 aa9.7□□□□□ -0.86
CDC42SE2-202ENST00000395246 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
CDC42SE2-202ENST00000395246 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms