RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SPANXB1Q9NS25 103 aaPredicted RBP7.7□□□□□ -1.18
COL4A6-203ENST00000394872 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 MPLKIPQ8TAP9 179 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 CLUHP3Q96NS8 147 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 PCDH15Q96QU1 1955 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 NDUFV3P56181 108 aaKnown RBP7.69□□□□□ -1.18
COL4A6-203ENST00000394872 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 CRIP1P50238 77 aa7.69□□□□□ -1.18
COL4A6-203ENST00000394872 IGKV2-28A0A075B6P5 120 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 IGKV2D-28P01615 120 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 SCXQ7RTU7 201 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 A0A0J9YWU9 116 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 CRIP3Q6Q6R5 217 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 Q6ZS46 218 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 MED12LQ86YW9 2145 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 LOC100131303A0A0U1RQF7 123 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 USP17L23D6RBM5 183 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 NANOS2P60321 138 aaKnown RBP7.68□□□□□ -1.18
COL4A6-203ENST00000394872 KIAA1549Q9HCM3 1950 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 RBX1P62877 108 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 SMR3AQ99954 134 aa7.68□□□□□ -1.18
COL4A6-203ENST00000394872 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 PPDPFQ9H3Y8 114 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 LELP1Q5T871 98 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 ZNF295-AS1Q8N0V1 137 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 C9orf85Q96MD7 179 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 OXLD1Q5BKU9 147 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 HRCT1Q6UXD1 115 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 Q8N6K4 173 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 LINC00526Q96FQ7 95 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 UBE2D4Q9Y2X8 147 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 WFDC10BQ8IUB3 73 aa7.67□□□□□ -1.18
COL4A6-203ENST00000394872 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
COL4A6-203ENST00000394872 OTOGLQ3ZCN5 2332 aa7.66□□□□□ -1.18
COL4A6-203ENST00000394872 RNF185Q96GF1 192 aa7.66□□□□□ -1.18
COL4A6-203ENST00000394872 CD164L2Q6UWJ8 174 aa7.66□□□□□ -1.18
COL4A6-203ENST00000394872 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
COL4A6-203ENST00000394872 IGLV4-69A0A075B6H9 119 aa7.65□□□□□ -1.18
COL4A6-203ENST00000394872 SPINK6Q6UWN8 80 aa7.65□□□□□ -1.18
COL4A6-203ENST00000394872 LOC107984640A0A0U1RRK4 108 aa7.65□□□□□ -1.18
COL4A6-203ENST00000394872 TEX49A0A1B0GTD5 131 aa7.65□□□□□ -1.18
COL4A6-203ENST00000394872 IGLV1-40P01703 118 aa7.65□□□□□ -1.18
COL4A6-203ENST00000394872 FAM236DA0A1B0GTK5 79 aa7.65□□□□□ -1.19
COL4A6-203ENST00000394872 PRM2P04554 102 aa7.65□□□□□ -1.19
COL4A6-203ENST00000394872 FAM236CP0DP71 79 aa7.65□□□□□ -1.19
COL4A6-203ENST00000394872 CDSNQ15517 529 aa7.65□□□□□ -1.19
COL4A6-203ENST00000394872 C1orf158Q8N1D5 194 aa7.65□□□□□ -1.19
COL4A6-203ENST00000394872 C6orf99Q4VX62 202 aa7.65□□□□□ -1.19
COL4A6-203ENST00000394872 UQCRQO14949 82 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 DSCAML1Q8TD84 2053 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 IGHV4-30-4P0DP06 118 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 U3KQK5 164 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 UBE2D3P61077 147 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 TSHBP01222 138 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 ENHOQ6UWT2 76 aa7.64□□□□□ -1.19
COL4A6-203ENST00000394872 LINC00959A0A1B0GUT2 108 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 RPL37AP8A6NKH3 93 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 RNASE3P12724 160 aaKnown RBP7.63□□□□□ -1.19
COL4A6-203ENST00000394872 MBD6Q96DN6 1003 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 M0R378 163 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 PRR9Q5T870 116 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 PYGO1Q9Y3Y4 419 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 TANC2Q9HCD6 1990 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 TRIAP1O43715 76 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 CCKP06307 115 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 TRBV27A0A0K0K1C4 114 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 A8MZ25 164 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 C3orf84H3BNL1 204 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 NDUFA7O95182 113 aa7.63□□□□□ -1.19
COL4A6-203ENST00000394872 MAPKAPK5-AS1Q8N8E1 139 aa7.62□□□□□ -1.19
COL4A6-203ENST00000394872 TRBV6-5A0A0K0K1A5 114 aa7.62□□□□□ -1.19
COL4A6-203ENST00000394872 PCNX3Q9H6A9 2034 aa7.62□□□□□ -1.19
COL4A6-203ENST00000394872 PLAC8L1A1L4L8 177 aa7.62□□□□□ -1.19
COL4A6-203ENST00000394872 DHRS4-AS1Q9P1J3 65 aa7.62□□□□□ -1.19
COL4A6-203ENST00000394872 IGLV9-49A0A0B4J1Y8 123 aa7.62□□□□□ -1.19
COL4A6-203ENST00000394872 IGLV2-11P01706 119 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 KRTAP10-9P60411 292 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 AVPP01185 164 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 ATP5EP2Q5VTU8 51 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 KLLNB2CW77 178 aa7.61□□□□□ -1.19
COL4A6-203ENST00000394872 NUPR2A6NF83 97 aa7.6□□□□□ -1.19
COL4A6-203ENST00000394872 MRGPRG-AS1Q2M3A8 158 aa7.6□□□□□ -1.19
COL4A6-203ENST00000394872 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
COL4A6-203ENST00000394872 RETNQ9HD89 108 aa7.6□□□□□ -1.19
COL4A6-203ENST00000394872 NRACQ8N912 160 aa7.6□□□□□ -1.19
COL4A6-203ENST00000394872 TIMM17BO60830 172 aa7.59□□□□□ -1.2
COL4A6-203ENST00000394872 C11orf21Q9P2W6 132 aa7.59□□□□□ -1.2
COL4A6-203ENST00000394872 K7ERS5 55 aa7.58□□□□□ -1.2
COL4A6-203ENST00000394872 TP73-AS1Q9UF72 201 aa7.58□□□□□ -1.2
COL4A6-203ENST00000394872 BDP1A6H8Y1 2624 aa7.58□□□□□ -1.2
COL4A6-203ENST00000394872 EDN2P20800 178 aa7.58□□□□□ -1.2
COL4A6-203ENST00000394872 PRR14LQ5THK1 2151 aa7.58□□□□□ -1.2
COL4A6-203ENST00000394872 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms