RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TRGV11A0A075B6L2 103 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 A8MWV9 139 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 MGPP08493 103 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 GIG44P09565 113 aaPredicted RBP5.03□□□□□ -1.6
RTN4-205ENST00000394609 INSL3P51460 131 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 RPL32P62910 135 aaKnown RBP5.03□□□□□ -1.6
RTN4-205ENST00000394609 MRPL23Q16540 153 aaKnown RBP5.03□□□□□ -1.6
RTN4-205ENST00000394609 ZNF876PQ49A33 203 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 C1orf158Q8N1D5 194 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 FAM110AQ9BQ89 295 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 ANAPC13Q9BS18 74 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 MUC4Q99102 2169 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 RHODO00212 210 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 NXPH4O95158 308 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 MT-ATP8P03928 68 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 XGP55808 180 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 FAM74A4Q5TZK3 123 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 NFE4Q86UQ8 179 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 NEXN-AS1Q8NBZ9 246 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 TTTY13Q9BZ97 58 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 DPH3P1Q9H4G8 78 aa5.03□□□□□ -1.6
RTN4-205ENST00000394609 LINC00315P59091 139 aa5.02□□□□□ -1.61
RTN4-205ENST00000394609 WFDC9Q8NEX5 89 aa5.02□□□□□ -1.61
RTN4-205ENST00000394609 SMIM2Q9BVW6 85 aa5.02□□□□□ -1.61
RTN4-205ENST00000394609 KIF25-AS1Q9Y6Z4 181 aa5.02□□□□□ -1.61
RTN4-205ENST00000394609 F5H697 171 aa5.01□□□□□ -1.61
RTN4-205ENST00000394609 HERVK_113P61574 105 aa5.01□□□□□ -1.61
RTN4-205ENST00000394609 RPL39LQ96EH5 51 aaKnown RBP5.01□□□□□ -1.61
RTN4-205ENST00000394609 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
RTN4-205ENST00000394609 KRTAP9-8Q9BYQ0 159 aa5.01□□□□□ -1.61
RTN4-205ENST00000394609 NBEAL2Q6ZNJ1 2754 aa5.01□□□□□ -1.61
RTN4-205ENST00000394609 IGHV3-73A0A0B4J1V6 119 aa5□□□□□ -1.61
RTN4-205ENST00000394609 M0R2P5 195 aa5□□□□□ -1.61
RTN4-205ENST00000394609 CRYGDP07320 174 aa5□□□□□ -1.61
RTN4-205ENST00000394609 SCGB1C2P0DMR2 95 aa5□□□□□ -1.61
RTN4-205ENST00000394609 P0DMU3 169 aa5□□□□□ -1.61
RTN4-205ENST00000394609 FAM231AP0DMU4 169 aa5□□□□□ -1.61
RTN4-205ENST00000394609 FAM231CP0DMU5 169 aa5□□□□□ -1.61
RTN4-205ENST00000394609 RPL13AP40429 203 aaKnown RBP5□□□□□ -1.61
RTN4-205ENST00000394609 ZNF415Q09FC8 603 aa5□□□□□ -1.61
RTN4-205ENST00000394609 C10orf126Q8N4M7 172 aa5□□□□□ -1.61
RTN4-205ENST00000394609 C11orf72Q8NBR9 251 aa5□□□□□ -1.61
RTN4-205ENST00000394609 RASL10AQ92737 203 aa5□□□□□ -1.61
RTN4-205ENST00000394609 RNF183Q96D59 192 aa5□□□□□ -1.61
RTN4-205ENST00000394609 PKD1L1Q8TDX9 2849 aa5□□□□□ -1.61
RTN4-205ENST00000394609 ZNF815PA8K554 130 aa5□□□□□ -1.61
RTN4-205ENST00000394609 SUMO4Q6EEV6 95 aa5□□□□□ -1.61
RTN4-205ENST00000394609 CSNK1G2-AS1Q8NCQ2 148 aa5□□□□□ -1.61
RTN4-205ENST00000394609 DEFB104AQ8WTQ1 72 aa5□□□□□ -1.61
RTN4-205ENST00000394609 SCGB3A1Q96QR1 104 aa5□□□□□ -1.61
RTN4-205ENST00000394609 LINC00467Q9BRT7 94 aa5□□□□□ -1.61
RTN4-205ENST00000394609 PRADC1Q9BSG0 188 aa5□□□□□ -1.61
RTN4-205ENST00000394609 GAGE12JA6NER3 117 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 PRSS29PA6NIE9 313 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE7O76087 117 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE12FP0CL80 117 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE12GP0CL81 117 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE12IP0CL82 117 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 PSMB2P49721 201 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE2BQ13066 116 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE4Q13068 117 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 SRSF9Q13242 221 aaKnown RBP eCLIP4.99□□□□□ -1.61
RTN4-205ENST00000394609 ZNF56Q15929 161 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE2EQ4V326 116 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 POM121L12Q8N7R1 296 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 SLC25A29Q8N8R3 303 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 GAGE2DQ9UEU5 116 aa4.99□□□□□ -1.61
RTN4-205ENST00000394609 A0A0B4J2C4 111 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 LOC107984156A0A0G2JMH3 177 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 SNCGO76070 127 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 NDUFV3P56181 108 aaKnown RBP4.98□□□□□ -1.61
RTN4-205ENST00000394609 SUMO2P61956 95 aaKnown RBP4.98□□□□□ -1.61
RTN4-205ENST00000394609 SCGB1D4Q6XE38 83 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 ARL17AQ8IVW1 177 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 TMEM141Q96I45 108 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 NOP10Q9NPE3 64 aaKnown RBP4.98□□□□□ -1.61
RTN4-205ENST00000394609 SPANXCQ9NY87 97 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 TRGV1A0A0A0MS02 117 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 A0A0J9YY99 117 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 C11orf86A6NJI1 115 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 ZNF561-AS1K7EIQ3 104 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 M0QY20 66 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 TCL1BO95988 128 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 NHLRC4P0CG21 123 aaPredicted RBP4.98□□□□□ -1.61
RTN4-205ENST00000394609 IFITM1P13164 125 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 EMP1P54849 157 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 BAALCQ8WXS3 180 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 SPXQ9BT56 116 aa4.98□□□□□ -1.61
RTN4-205ENST00000394609 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.97□□□□□ -1.61
RTN4-205ENST00000394609 SLC25A20O43772 301 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 IGHV3-30P01768 117 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 IGHV3-30-5P0DP03 117 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 Q6ZSN1 163 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 Q6ZTI0 123 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 ANKRD29Q8N6D5 301 aa4.97□□□□□ -1.61
RTN4-205ENST00000394609 TMEM263Q8WUH6 116 aaKnown RBP4.97□□□□□ -1.61
RTN4-205ENST00000394609 TIMM17AQ99595 171 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms