RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RBX1P62877 108 aa10.23□□□□□ -0.77
USP49-203ENST00000394253 A0A1B0GXF2 115 aa10.23□□□□□ -0.77
USP49-203ENST00000394253 PLA2G2AP14555 144 aa10.23□□□□□ -0.77
USP49-203ENST00000394253 SPAG11AQ6PDA7 123 aa10.23□□□□□ -0.77
USP49-203ENST00000394253 LTBP1Q14766 1721 aa10.23□□□□□ -0.77
USP49-203ENST00000394253 K7EMT4 169 aa10.23□□□□□ -0.77
USP49-203ENST00000394253 MRPS12O15235 138 aaKnown RBP10.22□□□□□ -0.77
USP49-203ENST00000394253 I3L2K1 104 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 K7EIM0 57 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 NEXN-AS1Q8NBZ9 246 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 C4orf3Q8WVX3 66 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 A0A096LNI7 61 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 LST1O00453 97 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 LINC00526Q96FQ7 95 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 SLPIP03973 132 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 MUC7Q8TAX7 377 aa10.22□□□□□ -0.77
USP49-203ENST00000394253 INSL3P51460 131 aa10.21□□□□□ -0.77
USP49-203ENST00000394253 SPINK6Q6UWN8 80 aa10.21□□□□□ -0.77
USP49-203ENST00000394253 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
USP49-203ENST00000394253 FAM167A-AS1Q96KT0 104 aa10.21□□□□□ -0.78
USP49-203ENST00000394253 DEFB135Q30KP9 77 aa10.21□□□□□ -0.78
USP49-203ENST00000394253 TP73-AS1Q9UF72 201 aa10.21□□□□□ -0.78
USP49-203ENST00000394253 PCSK5Q92824 1860 aa10.21□□□□□ -0.78
USP49-203ENST00000394253 ODF3Q96PU9 254 aa10.2□□□□□ -0.78
USP49-203ENST00000394253 Q6ZR03 302 aa10.2□□□□□ -0.78
USP49-203ENST00000394253 C22orf34Q6ZV56 151 aa10.2□□□□□ -0.78
USP49-203ENST00000394253 MAPK1IP1LQ8NDC0 245 aa10.2□□□□□ -0.78
USP49-203ENST00000394253 CHCHD10Q8WYQ3 142 aaPredicted RBP10.2□□□□□ -0.78
USP49-203ENST00000394253 Q0VFX4 171 aa10.2□□□□□ -0.78
USP49-203ENST00000394253 C1orf147Q96MC9 270 aaPredicted RBP10.19□□□□□ -0.78
USP49-203ENST00000394253 NAV2Q8IVL1 2488 aa10.19□□□□□ -0.78
USP49-203ENST00000394253 LINC00474Q9P2X8 69 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 USP24Q9UPU5 2620 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.18□□□□□ -0.78
USP49-203ENST00000394253 Q6ZQY7 126 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 PRORYQ9H606 182 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 A8MZ25 164 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 DIAPH2-AS1Q14236 149 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 ESRGQ1W209 222 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 C6orf99Q4VX62 202 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 IGLV1-44P01699 117 aa10.18□□□□□ -0.78
USP49-203ENST00000394253 IGHV7-81A0A0B4J1V7 117 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 TMEM254Q8TBM7 123 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 SPRY2O43597 315 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 CR1P17927 2039 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 SMAD5-AS1Q9Y6J3 95 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 AJUBAQ96IF1 538 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 ESM1Q9NQ30 184 aa10.17□□□□□ -0.78
USP49-203ENST00000394253 TMEM89A2RUT3 159 aa10.16□□□□□ -0.78
USP49-203ENST00000394253 LINC00467Q9BRT7 94 aa10.16□□□□□ -0.78
USP49-203ENST00000394253 C5orf56Q8N8D9 126 aa10.16□□□□□ -0.78
USP49-203ENST00000394253 C19orf71A6NCJ1 209 aa10.16□□□□□ -0.78
USP49-203ENST00000394253 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
USP49-203ENST00000394253 CCDC140Q96MF4 163 aa10.16□□□□□ -0.78
USP49-203ENST00000394253 X6R8D5 127 aa10.15□□□□□ -0.78
USP49-203ENST00000394253 LINC00208Q96KT6 92 aa10.15□□□□□ -0.78
USP49-203ENST00000394253 XGP55808 180 aa10.15□□□□□ -0.78
USP49-203ENST00000394253 M0R378 163 aa10.14□□□□□ -0.79
USP49-203ENST00000394253 EPOPA6NHQ4 379 aa10.14□□□□□ -0.79
USP49-203ENST00000394253 TRBV7-7A0A0K0K1E9 115 aa10.14□□□□□ -0.79
USP49-203ENST00000394253 CDKN2A-AS1Q9UH64 79 aa10.14□□□□□ -0.79
USP49-203ENST00000394253 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
USP49-203ENST00000394253 NRGNQ92686 78 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 XAGE1AQ9HD64 81 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 IGFL3Q6UXB1 125 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 A0A0J9YX75 114 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 LY6LH3BQJ8 138 aa10.13□□□□□ -0.79
USP49-203ENST00000394253 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
USP49-203ENST00000394253 CRYGAP11844 174 aa10.12□□□□□ -0.79
USP49-203ENST00000394253 LINC00322Q6ZN03 302 aaPredicted RBP10.12□□□□□ -0.79
USP49-203ENST00000394253 IGLV4-3A0A075B6K6 122 aa10.11□□□□□ -0.79
USP49-203ENST00000394253 ODF3L1Q8IXM7 274 aa10.11□□□□□ -0.79
USP49-203ENST00000394253 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
USP49-203ENST00000394253 DCANP1Q8TF63 244 aa10.11□□□□□ -0.79
USP49-203ENST00000394253 CEMP1Q6PRD7 247 aaPredicted RBP10.11□□□□□ -0.79
USP49-203ENST00000394253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.1□□□□□ -0.79
USP49-203ENST00000394253 ZNF73O43830 326 aaPredicted RBP10.1□□□□□ -0.79
USP49-203ENST00000394253 IGLV3-1P01715 115 aa10.1□□□□□ -0.79
USP49-203ENST00000394253 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 LINC01548A6NM66 108 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
USP49-203ENST00000394253 LINC01547P58512 204 aaPredicted RBP10.09□□□□□ -0.79
USP49-203ENST00000394253 POM121L12Q8N7R1 296 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 SPINT4Q6UDR6 99 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 H0Y9P7 68 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 NTM-AS1Q6ZSK4 140 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
USP49-203ENST00000394253 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
USP49-203ENST00000394253 CTSZQ9UBR2 303 aa10.08□□□□□ -0.8
USP49-203ENST00000394253 LOC107984640A0A0U1RRK4 108 aa10.08□□□□□ -0.8
USP49-203ENST00000394253 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
USP49-203ENST00000394253 C17orf82Q86X59 251 aaPredicted RBP10.08□□□□□ -0.8
USP49-203ENST00000394253 IGLV9-49A0A0B4J1Y8 123 aa10.08□□□□□ -0.8
USP49-203ENST00000394253 A6NDX4 124 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms