RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 LTBP2Q14767 1821 aa9.77□□□□□ -0.84
LCA5-202ENST00000392959 H7C423 109 aa9.77□□□□□ -0.84
LCA5-202ENST00000392959 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.84
LCA5-202ENST00000392959 CHKB-CPT1BH3BT56 60 aa9.77□□□□□ -0.85
LCA5-202ENST00000392959 RNASE3P12724 160 aaKnown RBP9.77□□□□□ -0.85
LCA5-202ENST00000392959 Q6YL49 198 aa9.77□□□□□ -0.85
LCA5-202ENST00000392959 PROK1P58294 105 aa9.76□□□□□ -0.85
LCA5-202ENST00000392959 SLPIP03973 132 aa9.76□□□□□ -0.85
LCA5-202ENST00000392959 LINC00310P59036 64 aa9.76□□□□□ -0.85
LCA5-202ENST00000392959 ZFYVE26Q68DK2 2539 aa9.76□□□□□ -0.85
LCA5-202ENST00000392959 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
LCA5-202ENST00000392959 MRPS12O15235 138 aaKnown RBP9.75□□□□□ -0.85
LCA5-202ENST00000392959 POLR2KP53803 58 aaKnown RBP9.75□□□□□ -0.85
LCA5-202ENST00000392959 Q8N6K4 173 aa9.75□□□□□ -0.85
LCA5-202ENST00000392959 ABCA12Q86UK0 2595 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 TRBV6-8A0A0A6YYG3 113 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 ATP5EP2Q5VTU8 51 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 Q8N976 141 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 LYRM9A8MSI8 78 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 PRR9Q5T870 116 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 A8MZ25 164 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 GAS8-AS1O95177 125 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 C10orf99Q6UWK7 81 aa9.74□□□□□ -0.85
LCA5-202ENST00000392959 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
LCA5-202ENST00000392959 TIMM17BO60830 172 aa9.73□□□□□ -0.85
LCA5-202ENST00000392959 TSHBP01222 138 aa9.73□□□□□ -0.85
LCA5-202ENST00000392959 C11orf71Q6IPW1 123 aa9.73□□□□□ -0.85
LCA5-202ENST00000392959 SPATA25Q9BR10 227 aa9.73□□□□□ -0.85
LCA5-202ENST00000392959 H0Y9J4 135 aa9.73□□□□□ -0.85
LCA5-202ENST00000392959 USP9YO00507 2555 aaPredicted RBP9.72□□□□□ -0.85
LCA5-202ENST00000392959 KLLNB2CW77 178 aa9.72□□□□□ -0.85
LCA5-202ENST00000392959 C6orf99Q4VX62 202 aa9.72□□□□□ -0.85
LCA5-202ENST00000392959 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
LCA5-202ENST00000392959 CNFNQ9BYD5 112 aa9.72□□□□□ -0.85
LCA5-202ENST00000392959 IGHV4-31P0DP07 118 aa9.72□□□□□ -0.85
LCA5-202ENST00000392959 ENHOQ6UWT2 76 aa9.72□□□□□ -0.85
LCA5-202ENST00000392959 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.85
LCA5-202ENST00000392959 C3orf22Q8N5N4 141 aa9.71□□□□□ -0.85
LCA5-202ENST00000392959 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.85
LCA5-202ENST00000392959 NUP210LQ5VU65 1888 aa9.71□□□□□ -0.86
LCA5-202ENST00000392959 LST1O00453 97 aa9.71□□□□□ -0.86
LCA5-202ENST00000392959 CRYGDP07320 174 aa9.71□□□□□ -0.86
LCA5-202ENST00000392959 COL4A4P53420 1690 aaPredicted RBP9.71□□□□□ -0.86
LCA5-202ENST00000392959 Q6ZS46 218 aa9.7□□□□□ -0.86
LCA5-202ENST00000392959 LRRC75A-AS1Q8N1F1 130 aa9.7□□□□□ -0.86
LCA5-202ENST00000392959 BRK1Q8WUW1 75 aa9.7□□□□□ -0.86
LCA5-202ENST00000392959 FN1P02751 2386 aaKnown RBP9.7□□□□□ -0.86
LCA5-202ENST00000392959 Q6ZSV7 163 aa9.7□□□□□ -0.86
LCA5-202ENST00000392959 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
LCA5-202ENST00000392959 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
LCA5-202ENST00000392959 FAM236DA0A1B0GTK5 79 aa9.69□□□□□ -0.86
LCA5-202ENST00000392959 FAM236CP0DP71 79 aa9.69□□□□□ -0.86
LCA5-202ENST00000392959 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
LCA5-202ENST00000392959 IMUPQ9GZP8 106 aa9.68□□□□□ -0.86
LCA5-202ENST00000392959 PKD1L2Q7Z442 2459 aa9.68□□□□□ -0.86
LCA5-202ENST00000392959 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
LCA5-202ENST00000392959 XGP55808 180 aa9.67□□□□□ -0.86
LCA5-202ENST00000392959 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
LCA5-202ENST00000392959 B9D2Q9BPU9 175 aa9.67□□□□□ -0.86
LCA5-202ENST00000392959 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
LCA5-202ENST00000392959 C10orf142B7Z368 130 aa9.66□□□□□ -0.86
LCA5-202ENST00000392959 MRPS36P82909 103 aaKnown RBP9.66□□□□□ -0.86
LCA5-202ENST00000392959 PSMG3-AS1Q96PY0 264 aa9.66□□□□□ -0.86
LCA5-202ENST00000392959 USP17L23D6RBM5 183 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 CCKP06307 115 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 IGIPA6NJ69 53 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 PRORYQ9H606 182 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 CEP295Q9C0D2 2601 aa9.65□□□□□ -0.86
LCA5-202ENST00000392959 A0A096LNI7 61 aa9.65□□□□□ -0.87
LCA5-202ENST00000392959 C14orf177Q52M58 125 aa9.65□□□□□ -0.87
LCA5-202ENST00000392959 Q6ZQY7 126 aa9.65□□□□□ -0.87
LCA5-202ENST00000392959 SERP2Q8N6R1 65 aa9.65□□□□□ -0.87
LCA5-202ENST00000392959 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 BBC3Q96PG8 261 aaPredicted RBP9.64□□□□□ -0.87
LCA5-202ENST00000392959 KLK5Q9Y337 293 aaPredicted RBP9.64□□□□□ -0.87
LCA5-202ENST00000392959 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 MIFP14174 115 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 CD164L2Q6UWJ8 174 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 POM121L12Q8N7R1 296 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 IGLV1-40P01703 118 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 UBE2D1P51668 147 aa9.64□□□□□ -0.87
LCA5-202ENST00000392959 ATG2AQ2TAZ0 1938 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 PRM2P04554 102 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 IGKV4-1P06312 121 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 ZNF702PQ9H963 129 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 FAM19A1Q7Z5A9 133 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 C1orf158Q8N1D5 194 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 MPLKIPQ8TAP9 179 aa9.63□□□□□ -0.87
LCA5-202ENST00000392959 NDUFA7O95182 113 aa9.62□□□□□ -0.87
LCA5-202ENST00000392959 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
LCA5-202ENST00000392959 EML5Q05BV3 1969 aa9.62□□□□□ -0.87
LCA5-202ENST00000392959 LINC00959A0A1B0GUT2 108 aa9.61□□□□□ -0.87
LCA5-202ENST00000392959 LOC100131303A0A0U1RQF7 123 aa9.61□□□□□ -0.87
LCA5-202ENST00000392959 PRO3102Q9H379 93 aa9.61□□□□□ -0.87
LCA5-202ENST00000392959 LINC00526Q96FQ7 95 aa9.6□□□□□ -0.87
LCA5-202ENST00000392959 COX7CP15954 63 aa9.59□□□□□ -0.87
LCA5-202ENST00000392959 C3orf84H3BNL1 204 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms