RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 PDE6DO43924 150 aa5.78□□□□□ -1.48
IFT88-203ENST00000389373 BLOC1S1P78537 153 aa5.78□□□□□ -1.48
IFT88-203ENST00000389373 OR5A1Q8NGJ0 315 aa5.78□□□□□ -1.48
IFT88-203ENST00000389373 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 MALP21145 153 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 RPL13AP40429 203 aaKnown RBP5.77□□□□□ -1.49
IFT88-203ENST00000389373 MEF2BQ02080 365 aaPredicted RBP5.77□□□□□ -1.49
IFT88-203ENST00000389373 SS18Q15532 418 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 TMEM101Q96IK0 257 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 BTF3L4Q96K17 158 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 OPRPNQ99935 248 aaPredicted RBP5.77□□□□□ -1.49
IFT88-203ENST00000389373 CRCT1Q9UGL9 99 aa5.77□□□□□ -1.49
IFT88-203ENST00000389373 APOMO95445 188 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 APCSP02743 223 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 NTF3P20783 257 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 ALKAL2Q6UX46 152 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 KRTAP11-1Q8IUC1 163 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 NUP35Q8NFH5 326 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 OR2D3Q8NGH3 330 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 C11orf52Q96A22 123 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 SMIM12Q96EX1 92 aa5.76□□□□□ -1.49
IFT88-203ENST00000389373 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.75□□□□□ -1.49
IFT88-203ENST00000389373 RPL35P42766 123 aaKnown RBP5.75□□□□□ -1.49
IFT88-203ENST00000389373 BIN3Q9NQY0 253 aa5.75□□□□□ -1.49
IFT88-203ENST00000389373 H7C423 109 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 IGLC6P0CF74 106 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 GNG4P50150 75 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 CCL20P78556 96 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 CD164L2Q6UWJ8 174 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 LYZL1Q6UWQ5 148 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 GATD1Q8NB37 220 aa5.74□□□□□ -1.49
IFT88-203ENST00000389373 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 NCR2O95944 276 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
IFT88-203ENST00000389373 PMCHP20382 165 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 RPS20P60866 119 aaKnown RBP5.73□□□□□ -1.49
IFT88-203ENST00000389373 UBE2BP63146 152 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 CENPWQ5EE01 88 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
IFT88-203ENST00000389373 TSKUQ8WUA8 353 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
IFT88-203ENST00000389373 MED9Q9NWA0 146 aa5.73□□□□□ -1.49
IFT88-203ENST00000389373 XKRY2A2RUG3 117 aa5.72□□□□□ -1.49
IFT88-203ENST00000389373 TMEM250H0YL14 139 aa5.72□□□□□ -1.49
IFT88-203ENST00000389373 COX7A2LO14548 114 aa5.72□□□□□ -1.49
IFT88-203ENST00000389373 CDIP1Q9H305 208 aa5.72□□□□□ -1.49
IFT88-203ENST00000389373 CARHSP1Q9Y2V2 147 aaKnown RBP5.72□□□□□ -1.49
IFT88-203ENST00000389373 C19orf71A6NCJ1 209 aa5.71□□□□□ -1.5
IFT88-203ENST00000389373 F2Z2F3 143 aa5.71□□□□□ -1.5
IFT88-203ENST00000389373 TWIST1Q15672 202 aa5.71□□□□□ -1.5
IFT88-203ENST00000389373 C5orf38Q86SI9 138 aa5.71□□□□□ -1.5
IFT88-203ENST00000389373 RETNLBQ9BQ08 111 aa5.71□□□□□ -1.5
IFT88-203ENST00000389373 EIF5A2Q9GZV4 153 aaKnown RBP5.71□□□□□ -1.5
IFT88-203ENST00000389373 SDHAF1A6NFY7 115 aa5.7□□□□□ -1.5
IFT88-203ENST00000389373 TEX261Q6UWH6 196 aa5.7□□□□□ -1.5
IFT88-203ENST00000389373 C2orf48Q96LS8 159 aa5.7□□□□□ -1.5
IFT88-203ENST00000389373 RAB19A4D1S5 217 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 I3L3M4 83 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 SPAG11BQ08648 103 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 GAGE2EQ4V326 116 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 GAGE2DQ9UEU5 116 aa5.69□□□□□ -1.5
IFT88-203ENST00000389373 TRBV20OR9-2A0A075B6H5 130 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 TRAV13-1A0A0B4J241 112 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 C1orf196B1AJZ1 125 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 M0QXV9 152 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 CEBPGP53567 150 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 LINC01547P58512 204 aaPredicted RBP5.68□□□□□ -1.5
IFT88-203ENST00000389373 RNF151Q2KHN1 245 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
IFT88-203ENST00000389373 XP32Q5T750 250 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 FAM210AQ96ND0 272 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 IMMP2LQ96T52 175 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 TMEM242Q9NWH2 141 aa5.68□□□□□ -1.5
IFT88-203ENST00000389373 ESDP10768 282 aa5.67□□□□□ -1.5
IFT88-203ENST00000389373 FOXA3P55318 350 aaPredicted RBP5.67□□□□□ -1.5
IFT88-203ENST00000389373 RAB14P61106 215 aa5.67□□□□□ -1.5
IFT88-203ENST00000389373 SMIM15Q7Z3B0 74 aa5.67□□□□□ -1.5
IFT88-203ENST00000389373 SMIM7Q9BQ49 75 aa5.67□□□□□ -1.5
IFT88-203ENST00000389373 CNFNQ9BYD5 112 aa5.67□□□□□ -1.5
IFT88-203ENST00000389373 SMDT1Q9H4I9 107 aa5.67□□□□□ -1.5
IFT88-203ENST00000389373 ZNF861PO60384 105 aa5.66□□□□□ -1.5
IFT88-203ENST00000389373 TSHBP01222 138 aa5.66□□□□□ -1.5
IFT88-203ENST00000389373 CTRLP40313 264 aa5.66□□□□□ -1.5
IFT88-203ENST00000389373 PEA15Q15121 130 aa5.66□□□□□ -1.5
IFT88-203ENST00000389373 FAM74A3Q4VXF1 159 aa5.66□□□□□ -1.5
IFT88-203ENST00000389373 RPP21Q9H633 154 aaKnown RBP5.66□□□□□ -1.5
IFT88-203ENST00000389373 IGLV7-46A0A075B6I9 117 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 A0A087X002 238 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 ZNF727A8MUV8 499 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 NDUFA1O15239 70 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 UNQ6190/PRO20217Q6UXQ8 127 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 MRPL52Q86TS9 123 aaKnown RBP5.65□□□□□ -1.5
IFT88-203ENST00000389373 NUDT10Q8NFP7 164 aa5.65□□□□□ -1.5
IFT88-203ENST00000389373 ORAOV1Q8WV07 137 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms