RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 UBE2D3P61077 147 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 UBE2D2P62837 147 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 OVOL2Q9BRP0 275 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 A0A0U1RRA0 63 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
LTN1-203ENST00000389195 NPC2P61916 151 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
LTN1-203ENST00000389195 IGLV4-60A0A075B6I1 120 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 MRAPQ8TCY5 172 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
LTN1-203ENST00000389195 STAB2Q8WWQ8 2551 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 C12orf54Q6X4T0 127 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 HIST1H4GQ99525 98 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 CDKN2A-AS1Q9UH64 79 aa7.13□□□□□ -1.27
LTN1-203ENST00000389195 MYMXA0A1B0GTQ4 84 aa7.12□□□□□ -1.27
LTN1-203ENST00000389195 PTTG1IPP53801 180 aa7.12□□□□□ -1.27
LTN1-203ENST00000389195 LBHQ53QV2 105 aaPredicted RBP7.12□□□□□ -1.27
LTN1-203ENST00000389195 NHP2Q9NX24 153 aaKnown RBP7.12□□□□□ -1.27
LTN1-203ENST00000389195 E9PLD3 99 aa7.12□□□□□ -1.27
LTN1-203ENST00000389195 LINC00469Q8N7U9 141 aa7.12□□□□□ -1.27
LTN1-203ENST00000389195 TRAV26-1A0A087WT03 109 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 PIK3CD-AS1Q5SR53 167 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 DAND5Q8N907 189 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 CHCHD5Q9BSY4 110 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 TMEM262E9PQX1 116 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 F5H768 121 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 AMMECR1LQ6DCA0 310 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 ORAOV1Q8WV07 137 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 PTH2Q96A98 100 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 AMELXQ99217 191 aa7.11□□□□□ -1.27
LTN1-203ENST00000389195 H3BUT2 72 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 J3QQQ9 107 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 Q8NAQ8 132 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 EDA2RQ9HAV5 297 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 VAMP3Q15836 100 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 VSIG2Q96IQ7 327 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 MDFIQ99750 246 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 DNAH3Q8TD57 4116 aa7.1□□□□□ -1.27
LTN1-203ENST00000389195 TMEM223A0PJW6 202 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 UBE2L6O14933 153 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 CCL25O15444 150 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
LTN1-203ENST00000389195 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 CRYBA4P53673 196 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 APOC4P55056 127 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 DAD1P61803 113 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 HSD52Q0P140 79 aa7.09□□□□□ -1.27
LTN1-203ENST00000389195 DNHD1Q96M86 4753 aa7.09□□□□□ -1.28
LTN1-203ENST00000389195 TRBV6-4A0A1B0GX49 114 aa7.08□□□□□ -1.28
LTN1-203ENST00000389195 EIF4EBP3O60516 100 aaPredicted RBP7.08□□□□□ -1.28
LTN1-203ENST00000389195 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
LTN1-203ENST00000389195 PAX4O43316 350 aa7.08□□□□□ -1.28
LTN1-203ENST00000389195 LINC00242Q5T6M2 205 aa7.08□□□□□ -1.28
LTN1-203ENST00000389195 DAZ4Q86SG3 579 aaKnown RBP7.08□□□□□ -1.28
LTN1-203ENST00000389195 CEND1Q8N111 149 aa7.08□□□□□ -1.28
LTN1-203ENST00000389195 C10orf126Q8N4M7 172 aa7.08□□□□□ -1.28
LTN1-203ENST00000389195 DAZ3Q9NR90 486 aaKnown RBP7.08□□□□□ -1.28
LTN1-203ENST00000389195 PYGO1Q9Y3Y4 419 aa7.08□□□□□ -1.28
LTN1-203ENST00000389195 IGLV10-54A0A075B6I4 117 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 TRBV10-1A0A0K0K1A3 114 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 DLEU1O43261 78 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 LGALS3P17931 250 aaKnown RBP7.07□□□□□ -1.28
LTN1-203ENST00000389195 UBE2D1P51668 147 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 TMEM243Q9BU79 118 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 C11orf68Q9H3H3 251 aaKnown RBP7.07□□□□□ -1.28
LTN1-203ENST00000389195 TRBV6-8A0A0A6YYG3 113 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 APOMO95445 188 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 MRPS36P82909 103 aaKnown RBP7.07□□□□□ -1.28
LTN1-203ENST00000389195 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 MTURNQ8N3F0 131 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 OR5A1Q8NGJ0 315 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 TIMM21Q9BVV7 248 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 CDC42SE2Q9NRR3 84 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 HUWE1Q7Z6Z7 4374 aaKnown RBP7.07□□□□□ -1.28
LTN1-203ENST00000389195 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 SBSPONQ8IVN8 264 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 RNF183Q96D59 192 aa7.07□□□□□ -1.28
LTN1-203ENST00000389195 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
LTN1-203ENST00000389195 SPANXA1Q9NS26 97 aa7.06□□□□□ -1.28
LTN1-203ENST00000389195 HERVK_113P61574 105 aa7.06□□□□□ -1.28
LTN1-203ENST00000389195 H7C2G1 150 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 SIVA1O15304 175 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 PRSS2P07478 247 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 C5orf38Q86SI9 138 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 TMEM101Q96IK0 257 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 PRO0255Q9UI72 69 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 SHISA2Q6UWI4 295 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
LTN1-203ENST00000389195 LURAP1LQ8IV03 231 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 TOMM7Q9P0U1 55 aa7.05□□□□□ -1.28
LTN1-203ENST00000389195 A0A0J9YWU9 116 aa7.04□□□□□ -1.28
LTN1-203ENST00000389195 NANOS2P60321 138 aaKnown RBP7.04□□□□□ -1.28
LTN1-203ENST00000389195 Q6ZTC4 211 aa7.04□□□□□ -1.28
LTN1-203ENST00000389195 LINC00612Q8N6U2 182 aa7.04□□□□□ -1.28
LTN1-203ENST00000389195 XCL1P47992 114 aa7.04□□□□□ -1.28
LTN1-203ENST00000389195 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms