RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 XGP55808 180 aa11.53□□□□□ -0.56
ALK-201ENST00000389048 M0QY20 66 aa11.53□□□□□ -0.56
ALK-201ENST00000389048 SMIM11BQ8TCY0 68 aa11.52□□□□□ -0.56
ALK-201ENST00000389048 Q6ZS46 218 aa11.52□□□□□ -0.57
ALK-201ENST00000389048 PLXNB3Q9ULL4 1909 aa11.52□□□□□ -0.57
ALK-201ENST00000389048 GAS8-AS1O95177 125 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 X6R8D5 127 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 NCOA6Q14686 2063 aaPredicted RBP11.51□□□□□ -0.57
ALK-201ENST00000389048 SYCNQ0VAF6 134 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 TNCP24821 2201 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 PCNX1Q96RV3 2341 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 SERP2Q8N6R1 65 aa11.51□□□□□ -0.57
ALK-201ENST00000389048 Q6ZSR3 168 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 LY6G6CO95867 125 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 Q6YL49 198 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 IBA57-AS1B1ANH7 110 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 Q8NA96 180 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 ODF3BA8MYP8 253 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 K7EQG2 157 aa11.5□□□□□ -0.57
ALK-201ENST00000389048 DAZAP2Q15038 168 aaPredicted RBP11.5□□□□□ -0.57
ALK-201ENST00000389048 SPTAN1Q13813 2472 aaKnown RBP11.5□□□□□ -0.57
ALK-201ENST00000389048 LYRM9A8MSI8 78 aa11.49□□□□□ -0.57
ALK-201ENST00000389048 Q6Q795 121 aa11.49□□□□□ -0.57
ALK-201ENST00000389048 TRBV30A0A0K0K1B3 111 aa11.49□□□□□ -0.57
ALK-201ENST00000389048 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
ALK-201ENST00000389048 TMEM89A2RUT3 159 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 C7orf33Q8WU49 177 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 KIR2DL5BQ8NHK3 375 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 LMO4P61968 165 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 PRR9Q5T870 116 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 FAM19A3Q7Z5A8 133 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 SPRY4Q9C004 299 aa11.48□□□□□ -0.57
ALK-201ENST00000389048 IGF2-ASQ6U949 168 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 Q6ZSV7 163 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 Q8N9L7 120 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 TSHBP01222 138 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 TANC1Q9C0D5 1861 aa11.47□□□□□ -0.57
ALK-201ENST00000389048 TNFRSF13BO14836 293 aaPredicted RBP11.47□□□□□ -0.57
ALK-201ENST00000389048 COX7CP15954 63 aa11.46□□□□□ -0.57
ALK-201ENST00000389048 EDN2P20800 178 aa11.45□□□□□ -0.58
ALK-201ENST00000389048 UBE2D2P62837 147 aa11.45□□□□□ -0.58
ALK-201ENST00000389048 PMAIP1Q13794 54 aa11.45□□□□□ -0.58
ALK-201ENST00000389048 H7C423 109 aa11.45□□□□□ -0.58
ALK-201ENST00000389048 NUP210Q8TEM1 1887 aaPredicted RBP11.45□□□□□ -0.58
ALK-201ENST00000389048 C9orf116Q5BN46 136 aaPredicted RBP11.45□□□□□ -0.58
ALK-201ENST00000389048 C2orf91Q6ZV80 131 aa11.45□□□□□ -0.58
ALK-201ENST00000389048 Q6ZVQ6 151 aa11.44□□□□□ -0.58
ALK-201ENST00000389048 P0C879 139 aa11.44□□□□□ -0.58
ALK-201ENST00000389048 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
ALK-201ENST00000389048 SPINK1P00995 79 aa11.44□□□□□ -0.58
ALK-201ENST00000389048 CRIP2P52943 208 aaPredicted RBP11.44□□□□□ -0.58
ALK-201ENST00000389048 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
ALK-201ENST00000389048 ESRGQ1W209 222 aa11.43□□□□□ -0.58
ALK-201ENST00000389048 KPRPQ5T749 579 aaPredicted RBP11.43□□□□□ -0.58
ALK-201ENST00000389048 LINC00959A0A1B0GUT2 108 aa11.43□□□□□ -0.58
ALK-201ENST00000389048 MIFP14174 115 aa11.43□□□□□ -0.58
ALK-201ENST00000389048 DEFB116Q30KQ4 102 aa11.43□□□□□ -0.58
ALK-201ENST00000389048 CIRBP-AS1Q8TBR5 109 aa11.43□□□□□ -0.58
ALK-201ENST00000389048 COL4A3Q01955 1670 aa11.42□□□□□ -0.58
ALK-201ENST00000389048 A0A087WVE0 104 aa11.42□□□□□ -0.58
ALK-201ENST00000389048 PSPHP1O15172 72 aa11.42□□□□□ -0.58
ALK-201ENST00000389048 RIF1Q5UIP0 2472 aaKnown RBP11.41□□□□□ -0.58
ALK-201ENST00000389048 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 IL17DQ8TAD2 202 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 C11orf21Q9P2W6 132 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 M0R378 163 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 U3KQK5 164 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 MED13LQ71F56 2210 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 IGLV4-69A0A075B6H9 119 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 EBI3Q14213 229 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 C2orf16Q68DN1 1984 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 TMEM131Q92545 1883 aa11.41□□□□□ -0.58
ALK-201ENST00000389048 RNASE3P12724 160 aaKnown RBP11.4□□□□□ -0.58
ALK-201ENST00000389048 PCOTHQ58A44 107 aa11.4□□□□□ -0.58
ALK-201ENST00000389048 NRACQ8N912 160 aa11.4□□□□□ -0.58
ALK-201ENST00000389048 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
ALK-201ENST00000389048 IGLV2-11P01706 119 aa11.39□□□□□ -0.59
ALK-201ENST00000389048 LRRC75A-AS1Q8N1F1 130 aa11.39□□□□□ -0.59
ALK-201ENST00000389048 TRBV6-4A0A1B0GX49 114 aa11.39□□□□□ -0.59
ALK-201ENST00000389048 LY6G6DO95868 133 aa11.39□□□□□ -0.59
ALK-201ENST00000389048 ATP5EP56381 51 aaPredicted RBP11.39□□□□□ -0.59
ALK-201ENST00000389048 BEAN1Q3B7T3 259 aa11.38□□□□□ -0.59
ALK-201ENST00000389048 CD164L2Q6UWJ8 174 aa11.38□□□□□ -0.59
ALK-201ENST00000389048 IGHV6-1A0A0B4J1U7 121 aa11.38□□□□□ -0.59
ALK-201ENST00000389048 ZNF73O43830 326 aaPredicted RBP11.38□□□□□ -0.59
ALK-201ENST00000389048 NDUFC1O43677 76 aa11.38□□□□□ -0.59
ALK-201ENST00000389048 NBASA2RRP1 2371 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 LST1O00453 97 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 MED12LQ86YW9 2145 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 ZNF843Q8N446 348 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 NUP210LQ5VU65 1888 aa11.37□□□□□ -0.59
ALK-201ENST00000389048 TRAV10A0A0B4J240 114 aa11.36□□□□□ -0.59
ALK-201ENST00000389048 LINC00208Q96KT6 92 aa11.36□□□□□ -0.59
ALK-201ENST00000389048 A0A087WYN8 130 aa11.36□□□□□ -0.59
ALK-201ENST00000389048 CRIP3Q6Q6R5 217 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms