RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 HSBP1L1C9JCN9 74 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 F8VRH5 84 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 FGF6P10767 208 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 VCX2Q9H322 139 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 ICOSQ9Y6W8 199 aa5.56□□□□□ -1.52
ERCC8-202ENST00000381118 DPM2O94777 84 aa5.55□□□□□ -1.52
ERCC8-202ENST00000381118 MRPL23Q16540 153 aaKnown RBP5.55□□□□□ -1.52
ERCC8-202ENST00000381118 CST9LQ9H4G1 147 aa5.55□□□□□ -1.52
ERCC8-202ENST00000381118 SPANXA1Q9NS26 97 aa5.55□□□□□ -1.52
ERCC8-202ENST00000381118 PYGO1Q9Y3Y4 419 aa5.55□□□□□ -1.52
ERCC8-202ENST00000381118 MEGF8Q7Z7M0 2845 aa5.55□□□□□ -1.52
ERCC8-202ENST00000381118 TSTD3H0UI37 97 aa5.55□□□□□ -1.52
ERCC8-202ENST00000381118 STAB2Q8WWQ8 2551 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 TMEM262E9PQX1 116 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 PKIAP61925 76 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 C14orf144Q96I85 54 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 TP73-AS1Q9UF72 201 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 IGLV4-69A0A075B6H9 119 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 C11orf86A6NJI1 115 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 PLNP26678 52 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 ANKRD39Q53RE8 183 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 TMEM97Q5BJF2 176 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 PAPPA-AS1Q5QFB9 102 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 OR5A1Q8NGJ0 315 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 TMEM101Q96IK0 257 aa5.54□□□□□ -1.52
ERCC8-202ENST00000381118 CSMD3Q7Z407 3707 aa5.53□□□□□ -1.52
ERCC8-202ENST00000381118 IGLV4-60A0A075B6I1 120 aa5.53□□□□□ -1.52
ERCC8-202ENST00000381118 A0A0J9YXV3 536 aa5.53□□□□□ -1.52
ERCC8-202ENST00000381118 MPV17L2Q567V2 206 aa5.53□□□□□ -1.52
ERCC8-202ENST00000381118 AMELXQ99217 191 aa5.53□□□□□ -1.52
ERCC8-202ENST00000381118 NMUP48645 174 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 TMEM170BQ5T4T1 132 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 MRPL52Q86TS9 123 aaKnown RBP5.52□□□□□ -1.53
ERCC8-202ENST00000381118 Q8N3U1 123 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 C2orf88Q9BSF0 95 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 CHAC1Q9BUX1 264 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 CDC42SE2Q9NRR3 84 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 TRAV10A0A0B4J240 114 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 H7C423 109 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 LYPD5Q6UWN5 251 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
ERCC8-202ENST00000381118 IGKV2D-26A0A0A0MRZ7 120 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 MRPS36P82909 103 aaKnown RBP5.51□□□□□ -1.53
ERCC8-202ENST00000381118 SMAGPQ0VAQ4 97 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 CLPSL2Q6UWE3 100 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 CSDC2Q9Y534 153 aaKnown RBP5.51□□□□□ -1.53
ERCC8-202ENST00000381118 H3BNG1 76 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 NPSP0C0P6 89 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 IGLC3P0DOY3 106 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 ZNF25P17030 456 aaPredicted RBP5.51□□□□□ -1.53
ERCC8-202ENST00000381118 SH2D6Q7Z4S9 175 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 TTTY13Q9BZ97 58 aa5.51□□□□□ -1.53
ERCC8-202ENST00000381118 IGHV3-64A0A075B6Q5 118 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 IGLL5B9A064 214 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 DDTP30046 118 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 UBE2D1P51668 147 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 RBX1P62877 108 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 LELP1Q5T871 98 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 NFE4Q86UQ8 179 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 PCP2Q8IVA1 136 aa5.5□□□□□ -1.53
ERCC8-202ENST00000381118 TRAV8-6A0A0B4J262 113 aa5.49□□□□□ -1.53
ERCC8-202ENST00000381118 ANGP03950 147 aaKnown RBP5.49□□□□□ -1.53
ERCC8-202ENST00000381118 NHLRC4P0CG21 123 aaPredicted RBP5.49□□□□□ -1.53
ERCC8-202ENST00000381118 ZNF22P17026 224 aaPredicted RBP5.49□□□□□ -1.53
ERCC8-202ENST00000381118 COX6A2Q02221 97 aa5.49□□□□□ -1.53
ERCC8-202ENST00000381118 ESRGQ1W209 222 aa5.49□□□□□ -1.53
ERCC8-202ENST00000381118 MIEN1Q9BRT3 115 aa5.49□□□□□ -1.53
ERCC8-202ENST00000381118 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
ERCC8-202ENST00000381118 UQCR10Q9UDW1 63 aa5.49□□□□□ -1.53
ERCC8-202ENST00000381118 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
ERCC8-202ENST00000381118 STARD9Q9P2P6 4700 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 LINC00587B1AMM8 73 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 LINC00242Q5T6M2 205 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 WFDC10BQ8IUB3 73 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 LINC00269Q8N2A0 174 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 PLECQ15149 4684 aaKnown RBP5.48□□□□□ -1.53
ERCC8-202ENST00000381118 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 TINCRA0A1B0GVN0 87 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 IGHV3-30P01768 117 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 IGHV3-33P01772 117 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 IGHV3-30-3P0DP02 117 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 IGHV3-30-5P0DP03 117 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 COX8AP10176 69 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 SLC25A34Q6PIV7 304 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
ERCC8-202ENST00000381118 TRAV8-3A0A0A6YYJ7 113 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 J3QL48 77 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 HNRNPA3P51991 378 aaKnown RBP5.47□□□□□ -1.53
ERCC8-202ENST00000381118 HERVK_113P61574 105 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 C15orf53Q8NAA6 179 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 TMEM223A0PJW6 202 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 E9PLD3 99 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 HERVK_113P63121 156 aa5.47□□□□□ -1.53
ERCC8-202ENST00000381118 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms