RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 MRPS36P82909 103 aaKnown RBP13.62□□□□□ -0.23
CCM2-202ENST00000381112 Q6ZUT4 128 aa13.62□□□□□ -0.23
CCM2-202ENST00000381112 UBE2L6O14933 153 aa13.61□□□□□ -0.23
CCM2-202ENST00000381112 SH2D6Q7Z4S9 175 aa13.61□□□□□ -0.23
CCM2-202ENST00000381112 DEFB131BA0A096LNP1 70 aa13.61□□□□□ -0.23
CCM2-202ENST00000381112 HSBP1L1C9JCN9 74 aa13.61□□□□□ -0.23
CCM2-202ENST00000381112 DGAT2L7PQ6IED9 249 aa13.61□□□□□ -0.23
CCM2-202ENST00000381112 IGLV4-69A0A075B6H9 119 aa13.6□□□□□ -0.23
CCM2-202ENST00000381112 PCP4L1A6NKN8 68 aa13.6□□□□□ -0.23
CCM2-202ENST00000381112 SMAGPQ0VAQ4 97 aa13.6□□□□□ -0.23
CCM2-202ENST00000381112 STPG4Q8N801 248 aa13.6□□□□□ -0.23
CCM2-202ENST00000381112 CHCHD5Q9BSY4 110 aa13.6□□□□□ -0.23
CCM2-202ENST00000381112 TSTD3H0UI37 97 aa13.59□□□□□ -0.23
CCM2-202ENST00000381112 RNASE13Q5GAN3 156 aaKnown RBP13.59□□□□□ -0.23
CCM2-202ENST00000381112 GAGE6Q13070 117 aa13.59□□□□□ -0.23
CCM2-202ENST00000381112 MEGF8Q7Z7M0 2845 aa13.58□□□□□ -0.23
CCM2-202ENST00000381112 AMMECR1LQ6DCA0 310 aa13.58□□□□□ -0.24
CCM2-202ENST00000381112 OR5A1Q8NGJ0 315 aa13.58□□□□□ -0.24
CCM2-202ENST00000381112 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
CCM2-202ENST00000381112 ZNF25P17030 456 aaPredicted RBP13.57□□□□□ -0.24
CCM2-202ENST00000381112 ANKRD39Q53RE8 183 aa13.57□□□□□ -0.24
CCM2-202ENST00000381112 DNAH9Q9NYC9 4486 aa13.56□□□□□ -0.24
CCM2-202ENST00000381112 TRAV10A0A0B4J240 114 aa13.56□□□□□ -0.24
CCM2-202ENST00000381112 C11orf86A6NJI1 115 aa13.56□□□□□ -0.24
CCM2-202ENST00000381112 DEFA6Q01524 100 aa13.56□□□□□ -0.24
CCM2-202ENST00000381112 TMEM101Q96IK0 257 aa13.56□□□□□ -0.24
CCM2-202ENST00000381112 NHLRC4P0CG21 123 aaPredicted RBP13.55□□□□□ -0.24
CCM2-202ENST00000381112 NFE4Q86UQ8 179 aa13.55□□□□□ -0.24
CCM2-202ENST00000381112 IGLC3P0DOY3 106 aa13.55□□□□□ -0.24
CCM2-202ENST00000381112 C2orf88Q9BSF0 95 aa13.55□□□□□ -0.24
CCM2-202ENST00000381112 COL7A1Q02388 2944 aa13.54□□□□□ -0.24
CCM2-202ENST00000381112 STAB2Q8WWQ8 2551 aa13.54□□□□□ -0.24
CCM2-202ENST00000381112 A0A0J9YXV3 536 aa13.54□□□□□ -0.24
CCM2-202ENST00000381112 TIRAPP58753 221 aa13.53□□□□□ -0.24
CCM2-202ENST00000381112 LELP1Q5T871 98 aa13.53□□□□□ -0.24
CCM2-202ENST00000381112 LYPD5Q6UWN5 251 aa13.53□□□□□ -0.24
CCM2-202ENST00000381112 IGLV4-60A0A075B6I1 120 aa13.53□□□□□ -0.24
CCM2-202ENST00000381112 C14orf144Q96I85 54 aa13.53□□□□□ -0.24
CCM2-202ENST00000381112 UBE2D1P51668 147 aa13.52□□□□□ -0.25
CCM2-202ENST00000381112 TCTAP57738 103 aa13.52□□□□□ -0.25
CCM2-202ENST00000381112 CHAC1Q9BUX1 264 aa13.52□□□□□ -0.25
CCM2-202ENST00000381112 A0A1B0GUV1 79 aa13.51□□□□□ -0.25
CCM2-202ENST00000381112 MIEN1Q9BRT3 115 aa13.51□□□□□ -0.25
CCM2-202ENST00000381112 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
CCM2-202ENST00000381112 DDTP30046 118 aa13.5□□□□□ -0.25
CCM2-202ENST00000381112 RBX1P62877 108 aa13.5□□□□□ -0.25
CCM2-202ENST00000381112 MPV17L2Q567V2 206 aa13.5□□□□□ -0.25
CCM2-202ENST00000381112 UQCR10Q9UDW1 63 aa13.5□□□□□ -0.25
CCM2-202ENST00000381112 IGKV2D-26A0A0A0MRZ7 120 aa13.49□□□□□ -0.25
CCM2-202ENST00000381112 TINCRA0A1B0GVN0 87 aa13.49□□□□□ -0.25
CCM2-202ENST00000381112 TMEM170BQ5T4T1 132 aa13.48□□□□□ -0.25
CCM2-202ENST00000381112 COX8AP10176 69 aa13.48□□□□□ -0.25
CCM2-202ENST00000381112 ZNF22P17026 224 aaPredicted RBP13.48□□□□□ -0.25
CCM2-202ENST00000381112 FAM19A3Q7Z5A8 133 aa13.48□□□□□ -0.25
CCM2-202ENST00000381112 TRAV13-1A0A0B4J241 112 aa13.46□□□□□ -0.25
CCM2-202ENST00000381112 NMUP48645 174 aa13.46□□□□□ -0.25
CCM2-202ENST00000381112 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.25
CCM2-202ENST00000381112 E9PLD3 99 aa13.46□□□□□ -0.26
CCM2-202ENST00000381112 ESRGQ1W209 222 aa13.46□□□□□ -0.26
CCM2-202ENST00000381112 C15orf53Q8NAA6 179 aa13.46□□□□□ -0.26
CCM2-202ENST00000381112 SLC25A34Q6PIV7 304 aa13.45□□□□□ -0.26
CCM2-202ENST00000381112 TP73-AS1Q9UF72 201 aa13.45□□□□□ -0.26
CCM2-202ENST00000381112 PRKDCP78527 4128 aaKnown RBP13.45□□□□□ -0.26
CCM2-202ENST00000381112 TMEM223A0PJW6 202 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 LINC00587B1AMM8 73 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 PCP2Q8IVA1 136 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 Q8N3U1 123 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 GEMIN7Q9H840 131 aaKnown RBP13.44□□□□□ -0.26
CCM2-202ENST00000381112 IGLV5-45A0A087WSX0 123 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 TRAV8-6A0A0B4J262 113 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 SEC11AP67812 179 aa13.44□□□□□ -0.26
CCM2-202ENST00000381112 HERVK_113P61574 105 aa13.43□□□□□ -0.26
CCM2-202ENST00000381112 COX6A2Q02221 97 aa13.43□□□□□ -0.26
CCM2-202ENST00000381112 BOD1L2Q8IYS8 172 aa13.43□□□□□ -0.26
CCM2-202ENST00000381112 HERVK_113P63121 156 aa13.42□□□□□ -0.26
CCM2-202ENST00000381112 DLEU1O43261 78 aa13.42□□□□□ -0.26
CCM2-202ENST00000381112 LINC00469Q8N7U9 141 aa13.42□□□□□ -0.26
CCM2-202ENST00000381112 TTTY13Q9BZ97 58 aa13.42□□□□□ -0.26
CCM2-202ENST00000381112 IGLL5B9A064 214 aa13.41□□□□□ -0.26
CCM2-202ENST00000381112 CDKN2A-AS1Q9UH64 79 aa13.41□□□□□ -0.26
CCM2-202ENST00000381112 IGKV3OR2-268A0A0C4DH90 116 aa13.4□□□□□ -0.26
CCM2-202ENST00000381112 LINC00959A0A1B0GUT2 108 aa13.4□□□□□ -0.26
CCM2-202ENST00000381112 WFDC10BQ8IUB3 73 aa13.4□□□□□ -0.26
CCM2-202ENST00000381112 ANGP03950 147 aaKnown RBP13.39□□□□□ -0.27
CCM2-202ENST00000381112 HNRNPA3P51991 378 aaKnown RBP13.39□□□□□ -0.27
CCM2-202ENST00000381112 LINC00269Q8N2A0 174 aa13.39□□□□□ -0.27
CCM2-202ENST00000381112 MAPKAPK5-AS1Q8N8E1 139 aa13.38□□□□□ -0.27
CCM2-202ENST00000381112 H3BRM9 83 aa13.37□□□□□ -0.27
CCM2-202ENST00000381112 TSPEAR-AS2P59090 65 aa13.37□□□□□ -0.27
CCM2-202ENST00000381112 CLPSL2Q6UWE3 100 aa13.37□□□□□ -0.27
CCM2-202ENST00000381112 LEPROTO15243 131 aa13.36□□□□□ -0.27
CCM2-202ENST00000381112 C2orf91Q6ZV80 131 aa13.36□□□□□ -0.27
CCM2-202ENST00000381112 IGHV3-64A0A075B6Q5 118 aa13.36□□□□□ -0.27
CCM2-202ENST00000381112 TRAV8-3A0A0A6YYJ7 113 aa13.36□□□□□ -0.27
CCM2-202ENST00000381112 SPINK8P0C7L1 97 aa13.36□□□□□ -0.27
CCM2-202ENST00000381112 REG3AQ06141 175 aa13.36□□□□□ -0.27
CCM2-202ENST00000381112 MRPS16Q9Y3D3 137 aaKnown RBP13.36□□□□□ -0.27
CCM2-202ENST00000381112 FBN3Q75N90 2809 aa13.35□□□□□ -0.27
CCM2-202ENST00000381112 IGHV1-58A0A0C4DH39 117 aa13.35□□□□□ -0.27
CCM2-202ENST00000381112 J3QQQ9 107 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms