RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 IGHV1-58A0A0C4DH39 117 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 CFHR3Q02985 330 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 Q6ZRU5 148 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 PRR15Q8IV56 129 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 MPLKIPQ8TAP9 179 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 SNURFQ9Y675 71 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 A0A1W2PPR1 153 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 F8W735 103 aaPredicted RBP5.43□□□□□ -1.54
CDKL5-201ENST00000379989 OBSCN-AS1Q96MR7 158 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 PHLDA3Q9Y5J5 127 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 LINC01356Q8N9X3 169 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 KIF25-AS1Q9Y6Z4 181 aa5.43□□□□□ -1.54
CDKL5-201ENST00000379989 IGHV3OR16-8A0A075B7F1 116 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 HOXD3P31249 432 aaPredicted RBP5.42□□□□□ -1.54
CDKL5-201ENST00000379989 IGLV4-3A0A075B6K6 122 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 A6NDX4 124 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 CSMD1Q96PZ7 3565 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 TRAV7A0A075B6U4 112 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 C19orf84I3L1E1 186 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 S100A4P26447 101 aaKnown RBP5.42□□□□□ -1.54
CDKL5-201ENST00000379989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 SOSTDC1Q6X4U4 206 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 LINC00308Q8TCZ7 52 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 U3KQE9 123 aa5.42□□□□□ -1.54
CDKL5-201ENST00000379989 NDUFA4O00483 81 aa5.41□□□□□ -1.54
CDKL5-201ENST00000379989 PAX4O43316 350 aa5.41□□□□□ -1.54
CDKL5-201ENST00000379989 CTSGP08311 255 aa5.41□□□□□ -1.54
CDKL5-201ENST00000379989 ENHOQ6UWT2 76 aa5.41□□□□□ -1.54
CDKL5-201ENST00000379989 K7EMT4 169 aa5.41□□□□□ -1.54
CDKL5-201ENST00000379989 CLPSL1A2RUU4 121 aa5.4□□□□□ -1.54
CDKL5-201ENST00000379989 IGHV3-23P01764 117 aa5.4□□□□□ -1.54
CDKL5-201ENST00000379989 USP24Q9UPU5 2620 aa5.4□□□□□ -1.55
CDKL5-201ENST00000379989 PLAC8L1A1L4L8 177 aa5.4□□□□□ -1.55
CDKL5-201ENST00000379989 ZNF625Q96I27 306 aaPredicted RBP5.4□□□□□ -1.55
CDKL5-201ENST00000379989 NCR3O14931 201 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 RNASE3P12724 160 aaKnown RBP5.39□□□□□ -1.55
CDKL5-201ENST00000379989 RNASE4P34096 147 aaKnown RBP5.39□□□□□ -1.55
CDKL5-201ENST00000379989 ATP5EP2Q5VTU8 51 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 ATP6V0E1O15342 81 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 C20orf203Q8NBC4 194 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 WNK2Q9Y3S1 2297 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 BOD1L1Q8NFC6 3051 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 IGHV3-35A0A0C4DH35 117 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 IGHV4-61A0A0C4DH41 118 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 GNRH2O43555 120 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 LY6HO94772 140 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 RPL11P62913 178 aaKnown RBP5.39□□□□□ -1.55
CDKL5-201ENST00000379989 BLCAPP62952 87 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 C15orf32Q32M92 178 aa5.39□□□□□ -1.55
CDKL5-201ENST00000379989 A0A087WYN8 130 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 FSHBP01225 129 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 C4orf48Q5BLP8 95 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 A0A087WWL8 130 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 TRBV6-5A0A0K0K1A5 114 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 IBA57-AS1B1ANH7 110 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 SOCS3O14543 225 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 IGLV1-40P01703 118 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 MED14OSP0DP75 135 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
CDKL5-201ENST00000379989 TLN1Q9Y490 2541 aaKnown RBP5.38□□□□□ -1.55
CDKL5-201ENST00000379989 IGHV3-66A0A0C4DH42 116 aa5.38□□□□□ -1.55
CDKL5-201ENST00000379989 PRRC2CQ9Y520 2896 aaKnown RBP5.37□□□□□ -1.55
CDKL5-201ENST00000379989 NBPF19A0A087WUL8 3843 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 F5H697 171 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 BCE1O60756 84 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 S100A7L2Q5SY68 101 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 ZFAND2AQ8N6M9 145 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 UBR5O95071 2799 aaPredicted RBP5.37□□□□□ -1.55
CDKL5-201ENST00000379989 A0A096LNT2 108 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
CDKL5-201ENST00000379989 ZNF843Q8N446 348 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 PIEZO1Q92508 2521 aa5.37□□□□□ -1.55
CDKL5-201ENST00000379989 TRAV21A0A0B4J279 112 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 TRBV10-3A0A0K0K1G6 114 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 NDUFA1O15239 70 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 PRB3Q04118 309 aaPredicted RBP5.36□□□□□ -1.55
CDKL5-201ENST00000379989 HIST2H2BCQ6DN03 193 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 HIST2H2BDQ6DRA6 164 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 SPTBN4Q9H254 2564 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 IGHV3OR16-13A0A075B7E8 117 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 IGHV3-74A0A0B4J1X5 117 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 PIK3CD-AS1Q5SR53 167 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 IGHV4-30-2A0A087WSY4 118 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 TRAV10A0A0B4J240 114 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 CD28P10747 220 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 C6orf223Q8N319 242 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 CCDC140Q96MF4 163 aa5.36□□□□□ -1.55
CDKL5-201ENST00000379989 NDUFC1O43677 76 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 ECSCRQ19T08 205 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 DEFB113Q30KQ7 82 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 UNQ9165/PRO28630Q6UXU0 137 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 ABCA4P78363 2273 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 A0A087WZ39 114 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 DCHS2Q6V1P9 2916 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 AKAP9Q99996 3911 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 MIR7-3HGQ8N6C7 128 aa5.35□□□□□ -1.55
CDKL5-201ENST00000379989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms