RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 IGLV1-51P01701 117 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 CEND1Q8N111 149 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 LINC00574Q9H8X3 128 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 MSRB1Q9NZV6 116 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 TRAV26-2A0A0B4J265 109 aa4.88□□□□□ -1.63
NEDD9-202ENST00000379446 MRPL51Q4U2R6 128 aaKnown RBP4.88□□□□□ -1.63
NEDD9-202ENST00000379446 A0A1B0GXF2 115 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 CYSRT1A8MQ03 144 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 NPC2P61916 151 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 TAL2Q16559 108 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 CT83Q5H943 113 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 AGPAT4-IT1Q9H0P7 198 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 I3L2K1 104 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 FGF6P10767 208 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 EGR2P11161 476 aaPredicted RBP4.87□□□□□ -1.63
NEDD9-202ENST00000379446 H3BRN7 92 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 CRYGCP07315 174 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 LGALS9BQ3B8N2 356 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 LGALS9CQ6DKI2 356 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 GFRA4Q9GZZ7 299 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 KLF12Q9Y4X4 402 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 C19orf71A6NCJ1 209 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 K7EQD1 137 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 XGP55808 180 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 RASL10AQ92737 203 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 CCDC140Q96MF4 163 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 MLST8Q9BVC4 326 aa4.87□□□□□ -1.63
NEDD9-202ENST00000379446 A0A0J9YX75 114 aa4.86□□□□□ -1.63
NEDD9-202ENST00000379446 FOXI1Q12951 378 aa4.86□□□□□ -1.63
NEDD9-202ENST00000379446 ZFP2Q6ZN57 461 aa4.86□□□□□ -1.63
NEDD9-202ENST00000379446 Q9H8V8 135 aa4.86□□□□□ -1.63
NEDD9-202ENST00000379446 RAI1Q7Z5J4 1906 aaPredicted RBP4.86□□□□□ -1.63
NEDD9-202ENST00000379446 NSD1Q96L73 2696 aaPredicted RBP4.86□□□□□ -1.63
NEDD9-202ENST00000379446 TRAV2A0A0B4J234 112 aa4.86□□□□□ -1.63
NEDD9-202ENST00000379446 Q8N1Y9 231 aa4.86□□□□□ -1.63
NEDD9-202ENST00000379446 RS1O15537 224 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 RNASE13Q5GAN3 156 aaKnown RBP4.85□□□□□ -1.63
NEDD9-202ENST00000379446 FAM104BQ5XKR9 115 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 TMEM14CQ9P0S9 112 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 Q6ZUT4 128 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 ETDCA0A1B0GVM5 59 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 SDHAF1A6NFY7 115 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 K7EIL1 84 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 K7EQG2 157 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 RBMY1FQ15415 496 aaKnown RBP4.85□□□□□ -1.63
NEDD9-202ENST00000379446 MAPKAPK5-AS1Q8N8E1 139 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
NEDD9-202ENST00000379446 ORMDL2Q53FV1 153 aa4.84□□□□□ -1.63
NEDD9-202ENST00000379446 A0A096LNI7 61 aa4.84□□□□□ -1.63
NEDD9-202ENST00000379446 POM121L12Q8N7R1 296 aa4.84□□□□□ -1.63
NEDD9-202ENST00000379446 NTN5Q8WTR8 489 aaPredicted RBP4.84□□□□□ -1.63
NEDD9-202ENST00000379446 COX7A2LO14548 114 aa4.84□□□□□ -1.63
NEDD9-202ENST00000379446 ASPMQ8IZT6 3477 aa4.84□□□□□ -1.64
NEDD9-202ENST00000379446 TRAV8-4A0A0B4J246 113 aa4.84□□□□□ -1.64
NEDD9-202ENST00000379446 CCDC179H3BU77 68 aa4.84□□□□□ -1.64
NEDD9-202ENST00000379446 RPL32P62910 135 aaKnown RBP4.84□□□□□ -1.64
NEDD9-202ENST00000379446 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.64
NEDD9-202ENST00000379446 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.83□□□□□ -1.64
NEDD9-202ENST00000379446 IGKV2-29A2NJV5 120 aaPredicted RBP4.83□□□□□ -1.64
NEDD9-202ENST00000379446 I3L3M4 83 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 GAS8-AS1O95177 125 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 CRIP1P50238 77 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 EBI3Q14213 229 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 HIGD2AQ9BW72 106 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 PRAC2D3DTV9 90 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 NDUFA1O15239 70 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 IFITM1P13164 125 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 PMVKQ15126 192 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 CRYGBP07316 175 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 C9orf153Q5TBE3 101 aa4.83□□□□□ -1.64
NEDD9-202ENST00000379446 ZNF80P51504 273 aaPredicted RBP4.82□□□□□ -1.64
NEDD9-202ENST00000379446 MRGPRG-AS1Q2M3A8 158 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 ANKRD29Q8N6D5 301 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 GATD1Q8NB37 220 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 BAALCQ8WXS3 180 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 TNRC18O15417 2968 aaPredicted RBP4.82□□□□□ -1.64
NEDD9-202ENST00000379446 E9PLD3 99 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 UBE2D3P61077 147 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 SPAG11BQ08648 103 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 LAGE3Q14657 143 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 LINC00269Q8N2A0 174 aa4.82□□□□□ -1.64
NEDD9-202ENST00000379446 ADGRG4Q8IZF6 3080 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 ODF3L2Q3SX64 289 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 ERG28Q9UKR5 140 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 TRBV7-3A0A075B6L6 115 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 MYMXA0A1B0GTQ4 84 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 C6orf223Q8N319 242 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 DEFB105AQ8NG35 78 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 NDUFA12Q9UI09 145 aa4.81□□□□□ -1.64
NEDD9-202ENST00000379446 TRAV4A0A0B4J268 109 aa4.8□□□□□ -1.64
NEDD9-202ENST00000379446 LY6LH3BQJ8 138 aa4.8□□□□□ -1.64
NEDD9-202ENST00000379446 C2orf82Q6UX34 121 aa4.8□□□□□ -1.64
NEDD9-202ENST00000379446 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
NEDD9-202ENST00000379446 TEN1Q86WV5 123 aa4.8□□□□□ -1.64
NEDD9-202ENST00000379446 DMXL2Q8TDJ6 3036 aa4.8□□□□□ -1.64
NEDD9-202ENST00000379446 ZFHX4Q86UP3 3567 aa4.79□□□□□ -1.64
NEDD9-202ENST00000379446 DAZ2Q13117 558 aaKnown RBP4.79□□□□□ -1.64
NEDD9-202ENST00000379446 DAZ4Q86SG3 579 aaKnown RBP4.79□□□□□ -1.64
NEDD9-202ENST00000379446 DAZ3Q9NR90 486 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms