RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
TMEM88B-201ENST00000378821 LINC01620Q4KN68 170 aa12.31□□□□□ -0.44
TMEM88B-201ENST00000378821 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
TMEM88B-201ENST00000378821 IGLV10-54A0A075B6I4 117 aa12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 HLA-DQA1P01909 254 aa12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 PPBPP02775 128 aa12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 FCER1GP30273 86 aa12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 RPL32P62910 135 aaKnown RBP12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
TMEM88B-201ENST00000378821 PHOX2AO14813 284 aa12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 SCXQ7RTU7 201 aa12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 LINC00528Q8N1L1 170 aa12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 KIR2DL4Q99706 377 aa12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 SMIM2Q9BVW6 85 aa12.29□□□□□ -0.44
TMEM88B-201ENST00000378821 ZNF25P17030 456 aaPredicted RBP12.28□□□□□ -0.44
TMEM88B-201ENST00000378821 TMEM136Q6ZRR5 245 aa12.28□□□□□ -0.44
TMEM88B-201ENST00000378821 CLRN3Q8NCR9 226 aa12.28□□□□□ -0.44
TMEM88B-201ENST00000378821 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
TMEM88B-201ENST00000378821 TRAV8-4A0A0B4J246 113 aa12.27□□□□□ -0.45
TMEM88B-201ENST00000378821 IGKV3OR2-268A0A0C4DH90 116 aa12.27□□□□□ -0.45
TMEM88B-201ENST00000378821 RHEBQ15382 184 aa12.27□□□□□ -0.45
TMEM88B-201ENST00000378821 TRAV9-1A0A075B6T8 112 aa12.26□□□□□ -0.45
TMEM88B-201ENST00000378821 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
TMEM88B-201ENST00000378821 USP17L23D6RBM5 183 aa12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 DGAT2L7PQ6IED9 249 aa12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 OR5A1Q8NGJ0 315 aa12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 TMEM101Q96IK0 257 aa12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 RPS10P5Q9NQ39 176 aa12.25□□□□□ -0.45
TMEM88B-201ENST00000378821 S100PP25815 95 aa12.24□□□□□ -0.45
TMEM88B-201ENST00000378821 TCAPO15273 167 aa12.23□□□□□ -0.45
TMEM88B-201ENST00000378821 PRSS1P07477 247 aa12.23□□□□□ -0.45
TMEM88B-201ENST00000378821 LAMTOR2Q9Y2Q5 125 aa12.23□□□□□ -0.45
TMEM88B-201ENST00000378821 UBE2D4Q9Y2X8 147 aa12.23□□□□□ -0.45
TMEM88B-201ENST00000378821 APOC3P02656 99 aa12.22□□□□□ -0.45
TMEM88B-201ENST00000378821 CDC42SE2Q9NRR3 84 aa12.22□□□□□ -0.45
TMEM88B-201ENST00000378821 GAGE12HA6NDE8 117 aa12.21□□□□□ -0.45
TMEM88B-201ENST00000378821 KRTAP29-1A8MX34 341 aaPredicted RBP12.21□□□□□ -0.45
TMEM88B-201ENST00000378821 RPL39P62891 51 aaKnown RBP12.21□□□□□ -0.45
TMEM88B-201ENST00000378821 C9orf163Q8N9P6 203 aa12.21□□□□□ -0.45
TMEM88B-201ENST00000378821 MAP1LC3AQ9H492 121 aa12.21□□□□□ -0.45
TMEM88B-201ENST00000378821 LOC389332A0A1B0GUA5 103 aa12.2□□□□□ -0.46
TMEM88B-201ENST00000378821 PRSS47A8MTI9 375 aa12.2□□□□□ -0.46
TMEM88B-201ENST00000378821 ZNF664Q8N3J9 261 aa12.2□□□□□ -0.46
TMEM88B-201ENST00000378821 CHCHD10Q8WYQ3 142 aaPredicted RBP12.2□□□□□ -0.46
TMEM88B-201ENST00000378821 NDUFA5Q16718 116 aa12.19□□□□□ -0.46
TMEM88B-201ENST00000378821 KIAA1644Q3SXP7 199 aa12.19□□□□□ -0.46
TMEM88B-201ENST00000378821 Q6ZUT4 128 aa12.19□□□□□ -0.46
TMEM88B-201ENST00000378821 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
TMEM88B-201ENST00000378821 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
TMEM88B-201ENST00000378821 CSDC2Q9Y534 153 aaKnown RBP12.19□□□□□ -0.46
TMEM88B-201ENST00000378821 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
TMEM88B-201ENST00000378821 SMAGPQ0VAQ4 97 aa12.18□□□□□ -0.46
TMEM88B-201ENST00000378821 RNASE13Q5GAN3 156 aaKnown RBP12.18□□□□□ -0.46
TMEM88B-201ENST00000378821 SVBPQ8N300 66 aa12.18□□□□□ -0.46
TMEM88B-201ENST00000378821 SNAPINO95295 136 aa12.17□□□□□ -0.46
TMEM88B-201ENST00000378821 RAB5AP20339 215 aa12.17□□□□□ -0.46
TMEM88B-201ENST00000378821 Q8N8P6 123 aa12.17□□□□□ -0.46
TMEM88B-201ENST00000378821 GNB1LQ9BYB4 327 aa12.17□□□□□ -0.46
TMEM88B-201ENST00000378821 CCL25O15444 150 aa12.16□□□□□ -0.46
TMEM88B-201ENST00000378821 XCL1P47992 114 aa12.16□□□□□ -0.46
TMEM88B-201ENST00000378821 CNBPP62633 177 aaKnown RBP12.16□□□□□ -0.46
TMEM88B-201ENST00000378821 FOXI1Q12951 378 aa12.16□□□□□ -0.46
TMEM88B-201ENST00000378821 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
TMEM88B-201ENST00000378821 C15orf56Q8N910 161 aa12.15□□□□□ -0.46
TMEM88B-201ENST00000378821 FAM104AQ969W3 186 aa12.15□□□□□ -0.46
TMEM88B-201ENST00000378821 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.46
TMEM88B-201ENST00000378821 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
TMEM88B-201ENST00000378821 SS18Q15532 418 aa12.14□□□□□ -0.47
TMEM88B-201ENST00000378821 COX19Q49B96 90 aa12.14□□□□□ -0.47
TMEM88B-201ENST00000378821 hDV102S1A0JD36 115 aa12.13□□□□□ -0.47
TMEM88B-201ENST00000378821 J3QL48 77 aa12.13□□□□□ -0.47
TMEM88B-201ENST00000378821 CIRBPQ14011 172 aaKnown RBP12.13□□□□□ -0.47
TMEM88B-201ENST00000378821 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
TMEM88B-201ENST00000378821 MT-ND6P03923 174 aa12.12□□□□□ -0.47
TMEM88B-201ENST00000378821 IFI27P40305 119 aaPredicted RBP12.12□□□□□ -0.47
TMEM88B-201ENST00000378821 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
TMEM88B-201ENST00000378821 NXT2Q9NPJ8 142 aaKnown RBP12.12□□□□□ -0.47
TMEM88B-201ENST00000378821 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.12□□□□□ -0.47
TMEM88B-201ENST00000378821 TRAV13-1A0A0B4J241 112 aa12.11□□□□□ -0.47
TMEM88B-201ENST00000378821 SLPIP03973 132 aa12.11□□□□□ -0.47
TMEM88B-201ENST00000378821 MRPS36P82909 103 aaKnown RBP12.11□□□□□ -0.47
TMEM88B-201ENST00000378821 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
TMEM88B-201ENST00000378821 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
TMEM88B-201ENST00000378821 PANO1I0J062 215 aa12.1□□□□□ -0.47
TMEM88B-201ENST00000378821 FABP9Q0Z7S8 132 aa12.1□□□□□ -0.47
TMEM88B-201ENST00000378821 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
TMEM88B-201ENST00000378821 CFAP161Q6P656 301 aa12.1□□□□□ -0.47
TMEM88B-201ENST00000378821 CD164L2Q6UWJ8 174 aa12.1□□□□□ -0.47
TMEM88B-201ENST00000378821 C1orf196B1AJZ1 125 aa12.09□□□□□ -0.47
TMEM88B-201ENST00000378821 K7EMI3 77 aa12.09□□□□□ -0.47
TMEM88B-201ENST00000378821 ORMDL2Q53FV1 153 aa12.09□□□□□ -0.47
TMEM88B-201ENST00000378821 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
TMEM88B-201ENST00000378821 PYGO1Q9Y3Y4 419 aa12.09□□□□□ -0.47
TMEM88B-201ENST00000378821 IGLV4-3A0A075B6K6 122 aa12.08□□□□□ -0.48
TMEM88B-201ENST00000378821 OXTP01178 125 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms