RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 CDC42SE2Q9NRR3 84 aa21.91■■□□□ 1.1
PPP1CA-203ENST00000376745 DYNC1H1Q14204 4646 aaKnown RBP21.91■■□□□ 1.1
PPP1CA-203ENST00000376745 RAB5AP20339 215 aa21.9■■□□□ 1.1
PPP1CA-203ENST00000376745 TMEM18Q96B42 140 aa21.9■■□□□ 1.1
PPP1CA-203ENST00000376745 PGPEP1Q9NXJ5 209 aa21.9■■□□□ 1.1
PPP1CA-203ENST00000376745 IGLV10-54A0A075B6I4 117 aa21.9■■□□□ 1.1
PPP1CA-203ENST00000376745 Q8N814 137 aa21.9■■□□□ 1.1
PPP1CA-203ENST00000376745 TIMM21Q9BVV7 248 aa21.9■■□□□ 1.1
PPP1CA-203ENST00000376745 ALKBH7Q9BT30 221 aaPredicted RBP21.89■■□□□ 1.09
PPP1CA-203ENST00000376745 RPL39P62891 51 aaKnown RBP21.88■■□□□ 1.09
PPP1CA-203ENST00000376745 SMAGPQ0VAQ4 97 aa21.88■■□□□ 1.09
PPP1CA-203ENST00000376745 C16orf90A8MZG2 172 aa21.87■■□□□ 1.09
PPP1CA-203ENST00000376745 LECT2O14960 151 aa21.87■■□□□ 1.09
PPP1CA-203ENST00000376745 FABP9Q0Z7S8 132 aa21.87■■□□□ 1.09
PPP1CA-203ENST00000376745 ZNF664Q8N3J9 261 aa21.87■■□□□ 1.09
PPP1CA-203ENST00000376745 DGAT2L7PQ6IED9 249 aa21.86■■□□□ 1.09
PPP1CA-203ENST00000376745 CDPF1Q6NVV7 123 aa21.86■■□□□ 1.09
PPP1CA-203ENST00000376745 NXT2Q9NPJ8 142 aaKnown RBP21.86■■□□□ 1.09
PPP1CA-203ENST00000376745 IGKV3OR2-268A0A0C4DH90 116 aa21.84■■□□□ 1.09
PPP1CA-203ENST00000376745 K7EMI3 77 aa21.84■■□□□ 1.09
PPP1CA-203ENST00000376745 FUSP35637 526 aaKnown RBP eCLIP21.84■■□□□ 1.09
PPP1CA-203ENST00000376745 IFI27P40305 119 aaPredicted RBP21.84■■□□□ 1.09
PPP1CA-203ENST00000376745 CBLN2Q8IUK8 224 aa21.84■■□□□ 1.09
PPP1CA-203ENST00000376745 SMCO4Q9NRQ5 59 aa21.84■■□□□ 1.09
PPP1CA-203ENST00000376745 TRAPPC1Q9Y5R8 145 aa21.83■■□□□ 1.09
PPP1CA-203ENST00000376745 NTN5Q8WTR8 489 aaPredicted RBP21.82■■□□□ 1.08
PPP1CA-203ENST00000376745 FAM104AQ969W3 186 aa21.82■■□□□ 1.08
PPP1CA-203ENST00000376745 SPANXA1Q9NS26 97 aa21.82■■□□□ 1.08
PPP1CA-203ENST00000376745 DNAH5Q8TE73 4624 aa21.8■■□□□ 1.08
PPP1CA-203ENST00000376745 ORMDL2Q53FV1 153 aa21.8■■□□□ 1.08
PPP1CA-203ENST00000376745 LINC00959A0A1B0GUT2 108 aa21.79■■□□□ 1.08
PPP1CA-203ENST00000376745 CHCHD10Q8WYQ3 142 aaPredicted RBP21.79■■□□□ 1.08
PPP1CA-203ENST00000376745 Q6ZUT4 128 aa21.77■■□□□ 1.08
PPP1CA-203ENST00000376745 USP17L23D6RBM5 183 aa21.77■■□□□ 1.07
PPP1CA-203ENST00000376745 MRPS36P82909 103 aaKnown RBP21.76■■□□□ 1.07
PPP1CA-203ENST00000376745 PYGO1Q9Y3Y4 419 aa21.76■■□□□ 1.07
PPP1CA-203ENST00000376745 LRP1BQ9NZR2 4599 aa21.75■■□□□ 1.07
PPP1CA-203ENST00000376745 GAGE12HA6NDE8 117 aa21.75■■□□□ 1.07
PPP1CA-203ENST00000376745 RNASE13Q5GAN3 156 aaKnown RBP21.75■■□□□ 1.07
PPP1CA-203ENST00000376745 PRSS3P2Q8NHM4 247 aa21.75■■□□□ 1.07
PPP1CA-203ENST00000376745 LINC01546A6NGU7 62 aa21.74■■□□□ 1.07
PPP1CA-203ENST00000376745 C2orf66Q6UXQ4 117 aa21.74■■□□□ 1.07
PPP1CA-203ENST00000376745 OPRPNQ99935 248 aaPredicted RBP21.74■■□□□ 1.07
PPP1CA-203ENST00000376745 IGLV5-52A0A0A0MRZ9 124 aa21.73■■□□□ 1.07
PPP1CA-203ENST00000376745 C14orf177Q52M58 125 aa21.73■■□□□ 1.07
PPP1CA-203ENST00000376745 CYSLTR1Q9Y271 337 aa21.72■■□□□ 1.07
PPP1CA-203ENST00000376745 IGLV2-33A0A075B6J2 118 aaPredicted RBP21.71■■□□□ 1.07
PPP1CA-203ENST00000376745 SS18Q15532 418 aa21.71■■□□□ 1.07
PPP1CA-203ENST00000376745 CCL25O15444 150 aa21.71■■□□□ 1.07
PPP1CA-203ENST00000376745 FOXI1Q12951 378 aa21.71■■□□□ 1.07
PPP1CA-203ENST00000376745 C1orf196B1AJZ1 125 aa21.69■■□□□ 1.06
PPP1CA-203ENST00000376745 XCL1P47992 114 aa21.69■■□□□ 1.06
PPP1CA-203ENST00000376745 PRSS1P07477 247 aa21.68■■□□□ 1.06
PPP1CA-203ENST00000376745 C18orf32Q8TCD1 76 aa21.68■■□□□ 1.06
PPP1CA-203ENST00000376745 IGLV4-3A0A075B6K6 122 aa21.67■■□□□ 1.06
PPP1CA-203ENST00000376745 GCSHP23434 173 aa21.67■■□□□ 1.06
PPP1CA-203ENST00000376745 G0S2P27469 103 aa21.67■■□□□ 1.06
PPP1CA-203ENST00000376745 KIAA1109Q2LD37 5005 aa21.67■■□□□ 1.06
PPP1CA-203ENST00000376745 TRAV13-1A0A0B4J241 112 aa21.66■■□□□ 1.06
PPP1CA-203ENST00000376745 CD164L2Q6UWJ8 174 aa21.66■■□□□ 1.06
PPP1CA-203ENST00000376745 IGIPA6NJ69 53 aa21.65■■□□□ 1.06
PPP1CA-203ENST00000376745 KRTAP10-1P60331 282 aa21.65■■□□□ 1.06
PPP1CA-203ENST00000376745 TOMM6Q96B49 74 aa21.64■■□□□ 1.06
PPP1CA-203ENST00000376745 NPSP0C0P6 89 aa21.64■■□□□ 1.05
PPP1CA-203ENST00000376745 FA2HQ7L5A8 372 aa21.64■■□□□ 1.05
PPP1CA-203ENST00000376745 C15orf56Q8N910 161 aa21.63■■□□□ 1.05
PPP1CA-203ENST00000376745 TMEM141Q96I45 108 aa21.63■■□□□ 1.05
PPP1CA-203ENST00000376745 URB1-AS1Q96HZ7 61 aa21.62■■□□□ 1.05
PPP1CA-203ENST00000376745 COLCA2A8K830 154 aa21.61■■□□□ 1.05
PPP1CA-203ENST00000376745 CFAP161Q6P656 301 aa21.6■■□□□ 1.05
PPP1CA-203ENST00000376745 CDK2AP2O75956 126 aa21.59■■□□□ 1.05
PPP1CA-203ENST00000376745 IFITM10A6NMD0 228 aa21.58■■□□□ 1.05
PPP1CA-203ENST00000376745 TIMM17AQ99595 171 aa21.58■■□□□ 1.05
PPP1CA-203ENST00000376745 AP5S1Q9NUS5 200 aa21.58■■□□□ 1.05
PPP1CA-203ENST00000376745 LINC00614P0C842 121 aa21.58■■□□□ 1.04
PPP1CA-203ENST00000376745 AMELXQ99217 191 aa21.58■■□□□ 1.04
PPP1CA-203ENST00000376745 hDV102S1A0JD36 115 aa21.57■■□□□ 1.04
PPP1CA-203ENST00000376745 LINC01549A6NIU2 74 aa21.56■■□□□ 1.04
PPP1CA-203ENST00000376745 TEX43Q6ZNM6 134 aa21.56■■□□□ 1.04
PPP1CA-203ENST00000376745 LINC00173Q6ZV60 143 aa21.56■■□□□ 1.04
PPP1CA-203ENST00000376745 ERASQ7Z444 233 aa21.56■■□□□ 1.04
PPP1CA-203ENST00000376745 SCO1O75880 301 aa21.55■■□□□ 1.04
PPP1CA-203ENST00000376745 TRGC2P03986 189 aa21.55■■□□□ 1.04
PPP1CA-203ENST00000376745 Q6ZN92 141 aa21.54■■□□□ 1.04
PPP1CA-203ENST00000376745 GVQW2A0A096LPI5 108 aaPredicted RBP21.53■■□□□ 1.04
PPP1CA-203ENST00000376745 CNBPP62633 177 aaKnown RBP21.53■■□□□ 1.04
PPP1CA-203ENST00000376745 VCX2Q9H322 139 aa21.53■■□□□ 1.04
PPP1CA-203ENST00000376745 COX7A2LO14548 114 aa21.52■■□□□ 1.04
PPP1CA-203ENST00000376745 SLPIP03973 132 aa21.52■■□□□ 1.04
PPP1CA-203ENST00000376745 LINC01620Q4KN68 170 aa21.52■■□□□ 1.04
PPP1CA-203ENST00000376745 ZC2HC1BQ5TFG8 222 aa21.52■■□□□ 1.04
PPP1CA-203ENST00000376745 SCGB3A1Q96QR1 104 aa21.52■■□□□ 1.04
PPP1CA-203ENST00000376745 APOBP04114 4563 aaKnown RBP21.52■■□□□ 1.04
PPP1CA-203ENST00000376745 IGHV3OR16-9A0A0B4J2B5 98 aa21.52■■□□□ 1.03
PPP1CA-203ENST00000376745 IGHV1-58A0A0C4DH39 117 aa21.52■■□□□ 1.03
PPP1CA-203ENST00000376745 RAB5BP61020 215 aa21.52■■□□□ 1.03
PPP1CA-203ENST00000376745 A0A096LNJ9 63 aa21.51■■□□□ 1.03
PPP1CA-203ENST00000376745 UBE2D1P51668 147 aa21.51■■□□□ 1.03
PPP1CA-203ENST00000376745 HIGD2BQ4VC39 106 aa21.51■■□□□ 1.03
PPP1CA-203ENST00000376745 PAPPA-AS1Q5QFB9 102 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms