RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SMIM9A6NGZ8 99 aa9.47□□□□□ -0.89
VPS13A-204ENST00000376634 NUPR1O60356 82 aa9.46□□□□□ -0.89
VPS13A-204ENST00000376634 C20orf203Q8NBC4 194 aa9.46□□□□□ -0.89
VPS13A-204ENST00000376634 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.89
VPS13A-204ENST00000376634 ODF3Q96PU9 254 aa9.46□□□□□ -0.89
VPS13A-204ENST00000376634 LINC00467Q9BRT7 94 aa9.46□□□□□ -0.9
VPS13A-204ENST00000376634 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
VPS13A-204ENST00000376634 PATE2Q6UY27 113 aa9.45□□□□□ -0.9
VPS13A-204ENST00000376634 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
VPS13A-204ENST00000376634 A0A096LNI7 61 aa9.45□□□□□ -0.9
VPS13A-204ENST00000376634 A0A0J9YXY3 114 aa9.45□□□□□ -0.9
VPS13A-204ENST00000376634 SCXQ7RTU7 201 aa9.45□□□□□ -0.9
VPS13A-204ENST00000376634 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
VPS13A-204ENST00000376634 DEFB1P60022 68 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 DEFB131BA0A096LNP1 70 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 CEMP1Q6PRD7 247 aaPredicted RBP9.44□□□□□ -0.9
VPS13A-204ENST00000376634 TTTY13Q9BZ97 58 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 SNURFQ9Y675 71 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 C3orf84H3BNL1 204 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 FAM222AQ5U5X8 452 aa9.44□□□□□ -0.9
VPS13A-204ENST00000376634 TIMM17BO60830 172 aa9.43□□□□□ -0.9
VPS13A-204ENST00000376634 SPATA12Q7Z6I5 190 aa9.43□□□□□ -0.9
VPS13A-204ENST00000376634 ADORA2A-AS1P86434 159 aa9.43□□□□□ -0.9
VPS13A-204ENST00000376634 WT1P19544 449 aaPredicted RBP9.43□□□□□ -0.9
VPS13A-204ENST00000376634 CCKP06307 115 aa9.42□□□□□ -0.9
VPS13A-204ENST00000376634 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
VPS13A-204ENST00000376634 DAZAP2Q15038 168 aaPredicted RBP9.42□□□□□ -0.9
VPS13A-204ENST00000376634 C1orf195Q5TG92 126 aa9.42□□□□□ -0.9
VPS13A-204ENST00000376634 C20orf173Q96LM9 149 aa9.42□□□□□ -0.9
VPS13A-204ENST00000376634 SERP2Q8N6R1 65 aa9.41□□□□□ -0.9
VPS13A-204ENST00000376634 Q6ZTI0 123 aa9.41□□□□□ -0.9
VPS13A-204ENST00000376634 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-204ENST00000376634 DHRS4-AS1Q9P1J3 65 aa9.41□□□□□ -0.9
VPS13A-204ENST00000376634 IGFL2Q6UWQ7 119 aa9.41□□□□□ -0.9
VPS13A-204ENST00000376634 Q8N9L7 120 aa9.41□□□□□ -0.9
VPS13A-204ENST00000376634 LOXL1Q08397 574 aaPredicted RBP9.41□□□□□ -0.9
VPS13A-204ENST00000376634 SPRY4Q9C004 299 aa9.4□□□□□ -0.9
VPS13A-204ENST00000376634 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
VPS13A-204ENST00000376634 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
VPS13A-204ENST00000376634 C19orf71A6NCJ1 209 aa9.39□□□□□ -0.91
VPS13A-204ENST00000376634 Q8N7P7 452 aa9.39□□□□□ -0.91
VPS13A-204ENST00000376634 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.39□□□□□ -0.91
VPS13A-204ENST00000376634 HRCT1Q6UXD1 115 aa9.39□□□□□ -0.91
VPS13A-204ENST00000376634 ODF3L1Q8IXM7 274 aa9.39□□□□□ -0.91
VPS13A-204ENST00000376634 TRIAP1O43715 76 aa9.38□□□□□ -0.91
VPS13A-204ENST00000376634 IMUPQ9GZP8 106 aa9.38□□□□□ -0.91
VPS13A-204ENST00000376634 SLPIP03973 132 aa9.38□□□□□ -0.91
VPS13A-204ENST00000376634 IGLV2-14P01704 120 aa9.38□□□□□ -0.91
VPS13A-204ENST00000376634 IGKV2-28A0A075B6P5 120 aa9.38□□□□□ -0.91
VPS13A-204ENST00000376634 IGKV2D-28P01615 120 aa9.38□□□□□ -0.91
VPS13A-204ENST00000376634 DCANP1Q8TF63 244 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 TP53TG3Q9ULZ0 132 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 E7EUB6 86 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 MIFP14174 115 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 IGHV4-30-4P0DP06 118 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 NEXN-AS1Q8NBZ9 246 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 IGLV1-47P01700 117 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 CFAP126Q5VTH2 177 aa9.37□□□□□ -0.91
VPS13A-204ENST00000376634 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 TRBV27A0A0K0K1C4 114 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 A6NDX4 124 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 CDKN2A-AS1Q9UH64 79 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 LINC01548A6NM66 108 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 PMAIP1Q13794 54 aa9.36□□□□□ -0.91
VPS13A-204ENST00000376634 MRPS36P82909 103 aaKnown RBP9.35□□□□□ -0.91
VPS13A-204ENST00000376634 XAGE1AQ9HD64 81 aa9.35□□□□□ -0.91
VPS13A-204ENST00000376634 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
VPS13A-204ENST00000376634 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
VPS13A-204ENST00000376634 COX17Q14061 63 aa9.35□□□□□ -0.91
VPS13A-204ENST00000376634 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
VPS13A-204ENST00000376634 TRBV30A0A0K0K1B3 111 aa9.34□□□□□ -0.91
VPS13A-204ENST00000376634 UBE2D2P62837 147 aa9.34□□□□□ -0.92
VPS13A-204ENST00000376634 WFDC13Q8IUB5 93 aa9.33□□□□□ -0.92
VPS13A-204ENST00000376634 TNFRSF13BO14836 293 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-204ENST00000376634 MUC22E2RYF6 1773 aaPredicted RBP9.33□□□□□ -0.92
VPS13A-204ENST00000376634 IGLV4-3A0A075B6K6 122 aa9.33□□□□□ -0.92
VPS13A-204ENST00000376634 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
VPS13A-204ENST00000376634 PRYO14603 147 aa9.33□□□□□ -0.92
VPS13A-204ENST00000376634 PRR4Q16378 134 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 TRAV10A0A0B4J240 114 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 DEFB114Q30KQ6 69 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 ODF3BA8MYP8 253 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 ZFAND3Q9H8U3 227 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 C10orf25Q5T742 122 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 LY6LH3BQJ8 138 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 Q6ZVQ6 151 aa9.32□□□□□ -0.92
VPS13A-204ENST00000376634 LINC00322Q6ZN03 302 aaPredicted RBP9.31□□□□□ -0.92
VPS13A-204ENST00000376634 M0QY20 66 aa9.31□□□□□ -0.92
VPS13A-204ENST00000376634 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
VPS13A-204ENST00000376634 Q6YL49 198 aa9.31□□□□□ -0.92
VPS13A-204ENST00000376634 RETNQ9HD89 108 aa9.31□□□□□ -0.92
VPS13A-204ENST00000376634 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
VPS13A-204ENST00000376634 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms