RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PMCHP20382 165 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 KRTAP10-4P60372 401 aaPredicted RBP8.67□□□□□ -1.02
CLCN6-205ENST00000376492 KIAA1644Q3SXP7 199 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 SCXQ7RTU7 201 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 NRACQ8N912 160 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
CLCN6-205ENST00000376492 C5orf52A6NGY3 159 aa8.66□□□□□ -1.02
CLCN6-205ENST00000376492 G0S2P27469 103 aa8.66□□□□□ -1.02
CLCN6-205ENST00000376492 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
CLCN6-205ENST00000376492 Q8N3U1 123 aa8.66□□□□□ -1.02
CLCN6-205ENST00000376492 PLA2G2DQ9UNK4 145 aa8.66□□□□□ -1.02
CLCN6-205ENST00000376492 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-205ENST00000376492 TRBV27A0A0K0K1C4 114 aa8.65□□□□□ -1.02
CLCN6-205ENST00000376492 MGPP08493 103 aa8.65□□□□□ -1.02
CLCN6-205ENST00000376492 LINC00614P0C842 121 aa8.65□□□□□ -1.02
CLCN6-205ENST00000376492 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
CLCN6-205ENST00000376492 BAGE3Q86Y29 109 aa8.65□□□□□ -1.02
CLCN6-205ENST00000376492 VCYO14598 125 aa8.64□□□□□ -1.03
CLCN6-205ENST00000376492 POLR2KP53803 58 aaKnown RBP8.64□□□□□ -1.03
CLCN6-205ENST00000376492 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
CLCN6-205ENST00000376492 Q8N8P6 123 aa8.64□□□□□ -1.03
CLCN6-205ENST00000376492 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
CLCN6-205ENST00000376492 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
CLCN6-205ENST00000376492 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
CLCN6-205ENST00000376492 NPYP01303 97 aa8.63□□□□□ -1.03
CLCN6-205ENST00000376492 NIT1Q86X76 327 aa8.63□□□□□ -1.03
CLCN6-205ENST00000376492 PRSS3P2Q8NHM4 247 aa8.63□□□□□ -1.03
CLCN6-205ENST00000376492 AP5S1Q9NUS5 200 aa8.63□□□□□ -1.03
CLCN6-205ENST00000376492 NDUFA6P56556 154 aa8.62□□□□□ -1.03
CLCN6-205ENST00000376492 LAGE3Q14657 143 aa8.62□□□□□ -1.03
CLCN6-205ENST00000376492 ORMDL2Q53FV1 153 aa8.62□□□□□ -1.03
CLCN6-205ENST00000376492 TMEM97Q5BJF2 176 aa8.62□□□□□ -1.03
CLCN6-205ENST00000376492 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
CLCN6-205ENST00000376492 TM2D2Q9BX73 214 aa8.62□□□□□ -1.03
CLCN6-205ENST00000376492 NCR2O95944 276 aa8.61□□□□□ -1.03
CLCN6-205ENST00000376492 OXTP01178 125 aa8.61□□□□□ -1.03
CLCN6-205ENST00000376492 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
CLCN6-205ENST00000376492 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
CLCN6-205ENST00000376492 CHCHD7Q9BUK0 85 aa8.61□□□□□ -1.03
CLCN6-205ENST00000376492 TRAV26-2A0A0B4J265 109 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 SDHAF1A6NFY7 115 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 I3L3M4 83 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 HSBP1O75506 76 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
CLCN6-205ENST00000376492 NTM-AS1Q6ZSK4 140 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 BAALCQ8WXS3 180 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 TMEM18Q96B42 140 aa8.6□□□□□ -1.03
CLCN6-205ENST00000376492 TMA7Q9Y2S6 64 aaKnown RBP8.6□□□□□ -1.03
CLCN6-205ENST00000376492 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
CLCN6-205ENST00000376492 SERF1AO75920 110 aa8.59□□□□□ -1.03
CLCN6-205ENST00000376492 IFI27P40305 119 aaPredicted RBP8.59□□□□□ -1.03
CLCN6-205ENST00000376492 HIST3H2BBQ8N257 126 aa8.59□□□□□ -1.03
CLCN6-205ENST00000376492 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
CLCN6-205ENST00000376492 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
CLCN6-205ENST00000376492 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
CLCN6-205ENST00000376492 A0A087WX48 190 aa8.58□□□□□ -1.04
CLCN6-205ENST00000376492 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
CLCN6-205ENST00000376492 NPSP0C0P6 89 aa8.58□□□□□ -1.04
CLCN6-205ENST00000376492 S100A2P29034 98 aa8.58□□□□□ -1.04
CLCN6-205ENST00000376492 LINC00310P59036 64 aa8.58□□□□□ -1.04
CLCN6-205ENST00000376492 RPL39LQ96EH5 51 aaKnown RBP8.58□□□□□ -1.04
CLCN6-205ENST00000376492 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
CLCN6-205ENST00000376492 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
CLCN6-205ENST00000376492 FCER1GP30273 86 aa8.57□□□□□ -1.04
CLCN6-205ENST00000376492 PKIAP61925 76 aa8.57□□□□□ -1.04
CLCN6-205ENST00000376492 IQCJQ1A5X6 159 aa8.57□□□□□ -1.04
CLCN6-205ENST00000376492 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
CLCN6-205ENST00000376492 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
CLCN6-205ENST00000376492 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
CLCN6-205ENST00000376492 CHCHD5Q9BSY4 110 aa8.56□□□□□ -1.04
CLCN6-205ENST00000376492 KLK12Q9UKR0 248 aa8.56□□□□□ -1.04
CLCN6-205ENST00000376492 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
CLCN6-205ENST00000376492 LOC389332A0A1B0GUA5 103 aa8.55□□□□□ -1.04
CLCN6-205ENST00000376492 H7C423 109 aa8.55□□□□□ -1.04
CLCN6-205ENST00000376492 HBDP02042 147 aa8.55□□□□□ -1.04
CLCN6-205ENST00000376492 AKR1D1P51857 326 aa8.55□□□□□ -1.04
CLCN6-205ENST00000376492 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
CLCN6-205ENST00000376492 COX11Q9Y6N1 276 aa8.55□□□□□ -1.04
CLCN6-205ENST00000376492 RNF213Q63HN8 5207 aa8.54□□□□□ -1.04
CLCN6-205ENST00000376492 AMTP48728 403 aa8.54□□□□□ -1.04
CLCN6-205ENST00000376492 COTL1Q14019 142 aa8.54□□□□□ -1.04
CLCN6-205ENST00000376492 MPV17L2Q567V2 206 aa8.54□□□□□ -1.04
CLCN6-205ENST00000376492 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
CLCN6-205ENST00000376492 HSPB8Q9UJY1 196 aa8.54□□□□□ -1.04
CLCN6-205ENST00000376492 NUPR1O60356 82 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 LEPROTL1O95214 131 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 RBX1P62877 108 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 UBE2WQ96B02 151 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 TOMM6Q96B49 74 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 RMI2Q96E14 147 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 PYGO1Q9Y3Y4 419 aa8.53□□□□□ -1.04
CLCN6-205ENST00000376492 A0A1B0GUV1 79 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 ATP5LO75964 103 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 TSHBP01222 138 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
CLCN6-205ENST00000376492 GAGE6Q13070 117 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 PDZD11Q5EBL8 140 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms