RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 PAX4O43316 350 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 C12orf74Q32Q52 190 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 ATP6V0E2Q8NHE4 81 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 LOC100131303A0A0U1RQF7 123 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 C11orf86A6NJI1 115 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 GYPEP15421 78 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 TIRAPP58753 221 aa7.77□□□□□ -1.17
PDPN-202ENST00000376057 MRPS16Q9Y3D3 137 aaKnown RBP7.77□□□□□ -1.17
PDPN-202ENST00000376057 SIVA1O15304 175 aa7.76□□□□□ -1.17
PDPN-202ENST00000376057 K7EP13 123 aa7.76□□□□□ -1.17
PDPN-202ENST00000376057 DEFB4AO15263 64 aa7.75□□□□□ -1.17
PDPN-202ENST00000376057 SLC25A34Q6PIV7 304 aa7.75□□□□□ -1.17
PDPN-202ENST00000376057 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
PDPN-202ENST00000376057 VPS25Q9BRG1 176 aa7.75□□□□□ -1.17
PDPN-202ENST00000376057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.75□□□□□ -1.17
PDPN-202ENST00000376057 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
PDPN-202ENST00000376057 IGKV2-29A2NJV5 120 aaPredicted RBP7.75□□□□□ -1.17
PDPN-202ENST00000376057 FGF6P10767 208 aa7.75□□□□□ -1.17
PDPN-202ENST00000376057 COL6A5A8TX70 2615 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 A0A1B0GUV1 79 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 MRPL23Q16540 153 aaKnown RBP7.74□□□□□ -1.17
PDPN-202ENST00000376057 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 STPG4Q8N801 248 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 PKD1L1Q8TDX9 2849 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 E9PLD3 99 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 RETNQ9HD89 108 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 CDC42SE2Q9NRR3 84 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 NOTCH3Q9UM47 2321 aa7.74□□□□□ -1.17
PDPN-202ENST00000376057 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 UBE2D1P51668 147 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 SEC11AP67812 179 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 BATFQ16520 125 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 DEFB104AQ8WTQ1 72 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 TMEM101Q96IK0 257 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
PDPN-202ENST00000376057 ICOSQ9Y6W8 199 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 UBE2L6O14933 153 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 CCL25O15444 150 aa7.73□□□□□ -1.17
PDPN-202ENST00000376057 F5H768 121 aa7.72□□□□□ -1.17
PDPN-202ENST00000376057 HERVK_113P61574 105 aa7.72□□□□□ -1.17
PDPN-202ENST00000376057 DGAT2L7PQ6IED9 249 aa7.72□□□□□ -1.17
PDPN-202ENST00000376057 Q6ZUT4 128 aa7.72□□□□□ -1.17
PDPN-202ENST00000376057 OR5A1Q8NGJ0 315 aa7.72□□□□□ -1.17
PDPN-202ENST00000376057 HIGD1BQ9P298 99 aa7.72□□□□□ -1.17
PDPN-202ENST00000376057 A0A0J9YWU9 116 aa7.71□□□□□ -1.18
PDPN-202ENST00000376057 TMEM223A0PJW6 202 aa7.71□□□□□ -1.18
PDPN-202ENST00000376057 HNRNPA3P51991 378 aaKnown RBP7.71□□□□□ -1.18
PDPN-202ENST00000376057 CEMP1Q6PRD7 247 aaPredicted RBP7.71□□□□□ -1.18
PDPN-202ENST00000376057 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
PDPN-202ENST00000376057 ZNF22P17026 224 aaPredicted RBP7.7□□□□□ -1.18
PDPN-202ENST00000376057 COL5A1-AS1Q5SY13 56 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 C11orf45Q8TAV5 145 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 A0A096LPF7 62 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 LELP1Q5T871 98 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 AMMECR1LQ6DCA0 310 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 B9D2Q9BPU9 175 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 IGKV2D-26A0A0A0MRZ7 120 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 HERVK_113P63121 156 aa7.7□□□□□ -1.18
PDPN-202ENST00000376057 A0A0J9YXV3 536 aa7.69□□□□□ -1.18
PDPN-202ENST00000376057 LEPROTO15243 131 aa7.69□□□□□ -1.18
PDPN-202ENST00000376057 C2orf91Q6ZV80 131 aa7.69□□□□□ -1.18
PDPN-202ENST00000376057 DEFB121Q5J5C9 76 aa7.68□□□□□ -1.18
PDPN-202ENST00000376057 A0A0J9YY99 117 aa7.68□□□□□ -1.18
PDPN-202ENST00000376057 NMUP48645 174 aa7.68□□□□□ -1.18
PDPN-202ENST00000376057 Q6ZTC4 211 aa7.68□□□□□ -1.18
PDPN-202ENST00000376057 CHCHD5Q9BSY4 110 aa7.68□□□□□ -1.18
PDPN-202ENST00000376057 LINC00242Q5T6M2 205 aa7.67□□□□□ -1.18
PDPN-202ENST00000376057 PCP2Q8IVA1 136 aa7.67□□□□□ -1.18
PDPN-202ENST00000376057 PLEKHB2Q96CS7 222 aa7.67□□□□□ -1.18
PDPN-202ENST00000376057 TRAV10A0A0B4J240 114 aa7.67□□□□□ -1.18
PDPN-202ENST00000376057 H3BRM9 83 aa7.67□□□□□ -1.18
PDPN-202ENST00000376057 NHLRC4P0CG21 123 aaPredicted RBP7.67□□□□□ -1.18
PDPN-202ENST00000376057 TMEM170BQ5T4T1 132 aa7.67□□□□□ -1.18
PDPN-202ENST00000376057 MYMXA0A1B0GTQ4 84 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
PDPN-202ENST00000376057 GAGE6Q13070 117 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 UBE2V1Q13404 147 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 LYPD5Q6UWN5 251 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 ORAOV1Q8WV07 137 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 TAL2Q16559 108 aa7.66□□□□□ -1.18
PDPN-202ENST00000376057 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
PDPN-202ENST00000376057 C15orf53Q8NAA6 179 aa7.65□□□□□ -1.18
PDPN-202ENST00000376057 GEMIN7Q9H840 131 aaKnown RBP7.65□□□□□ -1.18
PDPN-202ENST00000376057 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.18
PDPN-202ENST00000376057 IGLV4-60A0A075B6I1 120 aa7.65□□□□□ -1.19
PDPN-202ENST00000376057 IGLV5-39A0A0G2JS06 123 aa7.65□□□□□ -1.19
PDPN-202ENST00000376057 NANOS2P60321 138 aaKnown RBP7.65□□□□□ -1.19
PDPN-202ENST00000376057 MAPKAPK5-AS1Q8N8E1 139 aa7.65□□□□□ -1.19
PDPN-202ENST00000376057 HTN3P15516 51 aa7.64□□□□□ -1.19
PDPN-202ENST00000376057 MRAPQ8TCY5 172 aa7.64□□□□□ -1.19
PDPN-202ENST00000376057 NBEAL2Q6ZNJ1 2754 aa7.64□□□□□ -1.19
PDPN-202ENST00000376057 J3QQQ9 107 aa7.64□□□□□ -1.19
PDPN-202ENST00000376057 HSD52Q0P140 79 aa7.64□□□□□ -1.19
PDPN-202ENST00000376057 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
PDPN-202ENST00000376057 TRAV8-6A0A0B4J262 113 aa7.63□□□□□ -1.19
PDPN-202ENST00000376057 COX6A2Q02221 97 aa7.63□□□□□ -1.19
PDPN-202ENST00000376057 OCIAD2Q56VL3 154 aa7.63□□□□□ -1.19
PDPN-202ENST00000376057 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms