RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 SPRY4Q9C004 299 aa10.98□□□□□ -0.65
NOTCH4-201ENST00000375023 BDP1A6H8Y1 2624 aa10.97□□□□□ -0.65
NOTCH4-201ENST00000375023 CFAP126Q5VTH2 177 aa10.97□□□□□ -0.65
NOTCH4-201ENST00000375023 UFSP1Q6NVU6 142 aa10.97□□□□□ -0.65
NOTCH4-201ENST00000375023 Q6ZPA2 131 aa10.97□□□□□ -0.65
NOTCH4-201ENST00000375023 CLUHP3Q96NS8 147 aa10.97□□□□□ -0.65
NOTCH4-201ENST00000375023 PRR4Q16378 134 aa10.97□□□□□ -0.65
NOTCH4-201ENST00000375023 HIVEP2P31629 2446 aa10.96□□□□□ -0.65
NOTCH4-201ENST00000375023 BRWD1-AS2P59051 145 aa10.96□□□□□ -0.65
NOTCH4-201ENST00000375023 TECTAO75443 2155 aa10.96□□□□□ -0.65
NOTCH4-201ENST00000375023 USP17L23D6RBM5 183 aa10.96□□□□□ -0.66
NOTCH4-201ENST00000375023 J3QL48 77 aa10.96□□□□□ -0.66
NOTCH4-201ENST00000375023 LRRC75A-AS1Q8N1F1 130 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 SPANXDQ9BXN6 97 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 SORL1Q92673 2214 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 PLXNB1O43157 2135 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 C20orf197Q8N268 126 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 HIGD1BQ9P298 99 aa10.95□□□□□ -0.66
NOTCH4-201ENST00000375023 TMEM89A2RUT3 159 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 K7EQG2 157 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 Q6ZSR3 168 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 MAPKAPK5-AS1Q8N8E1 139 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 NDUFC2O95298 119 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 EDN2P20800 178 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 CRIP1P50238 77 aa10.94□□□□□ -0.66
NOTCH4-201ENST00000375023 NDUFV3P56181 108 aaKnown RBP10.93□□□□□ -0.66
NOTCH4-201ENST00000375023 WFDC13Q8IUB5 93 aa10.93□□□□□ -0.66
NOTCH4-201ENST00000375023 POM121L12Q8N7R1 296 aa10.93□□□□□ -0.66
NOTCH4-201ENST00000375023 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
NOTCH4-201ENST00000375023 KPRPQ5T749 579 aaPredicted RBP10.93□□□□□ -0.66
NOTCH4-201ENST00000375023 MT-ATP8P03928 68 aa10.92□□□□□ -0.66
NOTCH4-201ENST00000375023 PTPN13Q12923 2485 aa10.92□□□□□ -0.66
NOTCH4-201ENST00000375023 G3V4G9 280 aa10.92□□□□□ -0.66
NOTCH4-201ENST00000375023 SPANXCQ9NY87 97 aa10.92□□□□□ -0.66
NOTCH4-201ENST00000375023 LYRM9A8MSI8 78 aa10.92□□□□□ -0.66
NOTCH4-201ENST00000375023 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
NOTCH4-201ENST00000375023 C6orf99Q4VX62 202 aa10.91□□□□□ -0.66
NOTCH4-201ENST00000375023 SNURFQ9Y675 71 aa10.91□□□□□ -0.66
NOTCH4-201ENST00000375023 TMEM223A0PJW6 202 aa10.91□□□□□ -0.66
NOTCH4-201ENST00000375023 J3KT08 172 aa10.91□□□□□ -0.66
NOTCH4-201ENST00000375023 IGLC6P0CF74 106 aa10.91□□□□□ -0.66
NOTCH4-201ENST00000375023 H3BQ85 93 aa10.91□□□□□ -0.66
NOTCH4-201ENST00000375023 LY6LH3BQJ8 138 aa10.9□□□□□ -0.66
NOTCH4-201ENST00000375023 ZNF22P17026 224 aaPredicted RBP10.9□□□□□ -0.66
NOTCH4-201ENST00000375023 PLAC8L1A1L4L8 177 aa10.9□□□□□ -0.66
NOTCH4-201ENST00000375023 ARHGAP32A7KAX9 2087 aa10.9□□□□□ -0.66
NOTCH4-201ENST00000375023 FBXL19-AS1Q494R0 122 aa10.9□□□□□ -0.67
NOTCH4-201ENST00000375023 SPG11Q96JI7 2443 aa10.9□□□□□ -0.67
NOTCH4-201ENST00000375023 ALPK3Q96L96 1907 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 H3BT86 120 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 CCKP06307 115 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 CSPG4Q6UVK1 2322 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 CEP192Q8TEP8 1941 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 K7ERS5 55 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 TRIAP1O43715 76 aa10.89□□□□□ -0.67
NOTCH4-201ENST00000375023 SYCNQ0VAF6 134 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 LINC00308Q8TCZ7 52 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 A0A1B0GXF2 115 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 LINC01006Q8NI28 216 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 M0QY20 66 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 CDSNQ15517 529 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 C11orf1Q9H5F2 150 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 ZNF702PQ9H963 129 aa10.88□□□□□ -0.67
NOTCH4-201ENST00000375023 C1orf134Q5TEV5 83 aa10.87□□□□□ -0.67
NOTCH4-201ENST00000375023 PRR9Q5T870 116 aa10.87□□□□□ -0.67
NOTCH4-201ENST00000375023 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
NOTCH4-201ENST00000375023 FAM30AQ9NZY2 134 aa10.86□□□□□ -0.67
NOTCH4-201ENST00000375023 SONP18583 2426 aaKnown RBP10.86□□□□□ -0.67
NOTCH4-201ENST00000375023 GAS8-AS1O95177 125 aa10.86□□□□□ -0.67
NOTCH4-201ENST00000375023 ZNF295-AS1Q8N0V1 137 aa10.86□□□□□ -0.67
NOTCH4-201ENST00000375023 TRBV6-5A0A0K0K1A5 114 aa10.85□□□□□ -0.67
NOTCH4-201ENST00000375023 RNF185Q96GF1 192 aa10.85□□□□□ -0.67
NOTCH4-201ENST00000375023 NDUFA7O95182 113 aa10.85□□□□□ -0.67
NOTCH4-201ENST00000375023 RBX1P62877 108 aa10.85□□□□□ -0.67
NOTCH4-201ENST00000375023 CUL9Q8IWT3 2517 aa10.85□□□□□ -0.67
NOTCH4-201ENST00000375023 PLA2G1BP04054 148 aaKnown RBP10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 MIFP14174 115 aa10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 MBD6Q96DN6 1003 aa10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 PRRC2AP48634 2157 aaKnown RBP10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 HCFC1P51610 2035 aa10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 SMIM9A6NGZ8 99 aa10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 P0C879 139 aa10.84□□□□□ -0.67
NOTCH4-201ENST00000375023 LINC00643Q86TS7 51 aa10.83□□□□□ -0.68
NOTCH4-201ENST00000375023 LINC01556Q5JQF7 62 aa10.82□□□□□ -0.68
NOTCH4-201ENST00000375023 NOTCH2Q04721 2471 aa10.82□□□□□ -0.68
NOTCH4-201ENST00000375023 Q6ZQY7 126 aa10.82□□□□□ -0.68
NOTCH4-201ENST00000375023 C11orf71Q6IPW1 123 aa10.81□□□□□ -0.68
NOTCH4-201ENST00000375023 CRIP3Q6Q6R5 217 aa10.81□□□□□ -0.68
NOTCH4-201ENST00000375023 EXPH5Q8NEV8 1989 aa10.81□□□□□ -0.68
NOTCH4-201ENST00000375023 C9orf116Q5BN46 136 aaPredicted RBP10.81□□□□□ -0.68
NOTCH4-201ENST00000375023 HIVEP3Q5T1R4 2406 aa10.81□□□□□ -0.68
NOTCH4-201ENST00000375023 C1orf137Q5JT78 98 aa10.81□□□□□ -0.68
NOTCH4-201ENST00000375023 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
NOTCH4-201ENST00000375023 MRPS12O15235 138 aaKnown RBP10.8□□□□□ -0.68
NOTCH4-201ENST00000375023 TSHBP01222 138 aa10.8□□□□□ -0.68
NOTCH4-201ENST00000375023 CRIP2P52943 208 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms