RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 H3BNG1 76 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 PRSS1P07477 247 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 RPL39P62891 51 aaKnown RBP7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 NTM-AS1Q6ZSK4 140 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SH2D6Q7Z4S9 175 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TMEM141Q96I45 108 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 ICOSQ9Y6W8 199 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 HSPG2P98160 4391 aa7.55□□□□□ -1.2
HLA-DQA1-202ENST00000374949 PYY3Q5JQD4 70 aa7.54□□□□□ -1.2
HLA-DQA1-202ENST00000374949 Q6ZN92 141 aa7.54□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SPATA12Q7Z6I5 190 aa7.54□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TRBV25-1A0A075B6N4 114 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TRBV6-8A0A0A6YYG3 113 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 C20orf202A1L168 122 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 IGKV2-29A2NJV5 120 aaPredicted RBP7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SMIM6P0DI80 62 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TIMM17AQ99595 171 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 TMEM243Q9BU79 118 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 PYGO1Q9Y3Y4 419 aa7.53□□□□□ -1.2
HLA-DQA1-202ENST00000374949 A0A096LPF7 62 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 H0Y8G0 127 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 H7C423 109 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 UBE2L6O14933 153 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 NPSP0C0P6 89 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 LINC00518Q8N0U6 118 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 Q8N976 141 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TIMM21Q9BVV7 248 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 SPANXA1Q9NS26 97 aa7.52□□□□□ -1.21
HLA-DQA1-202ENST00000374949 C16orf90A8MZG2 172 aa7.51□□□□□ -1.21
HLA-DQA1-202ENST00000374949 PAPPA-AS1Q5QFB9 102 aa7.51□□□□□ -1.21
HLA-DQA1-202ENST00000374949 LINC01545Q5VT33 79 aa7.51□□□□□ -1.21
HLA-DQA1-202ENST00000374949 MAPKAPK5-AS1Q8N8E1 139 aa7.51□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TRAV12-1A0A0B4J245 112 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TNP2Q05952 138 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 AMMECR1LQ6DCA0 310 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 BAALCQ8WXS3 180 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 C12orf57Q99622 126 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 CHCHD5Q9BSY4 110 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 UBE2D4Q9Y2X8 147 aa7.5□□□□□ -1.21
HLA-DQA1-202ENST00000374949 IGLV4-3A0A075B6K6 122 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 A0A087WX48 190 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 FGF6P10767 208 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 PMVKQ15126 192 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 LYPD5Q6UWN5 251 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 OPRPNQ99935 248 aaPredicted RBP7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 VCX2Q9H322 139 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 CSDC2Q9Y534 153 aaKnown RBP7.49□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TIRAPP58753 221 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 S100A12P80511 92 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 GAGE6Q13070 117 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 ODF1Q14990 250 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 LELP1Q5T871 98 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 C15orf53Q8NAA6 179 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 CHTOPQ9Y3Y2 248 aaKnown RBP7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TMEM262E9PQX1 116 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 ZNF25P17030 456 aaPredicted RBP7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 ZNF664Q8N3J9 261 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 OR5A1Q8NGJ0 315 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 FAM104AQ969W3 186 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 AMELXQ99217 191 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 PMCHL2Q9BQD1 86 aa7.47□□□□□ -1.21
HLA-DQA1-202ENST00000374949 DPM2O94777 84 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 IGKCP01834 107 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 PKIAP61925 76 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 CDPF1Q6NVV7 123 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 ATOH7Q8N100 152 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 CDC42SE2Q9NRR3 84 aa7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 MRPL35Q9NZE8 188 aaKnown RBP7.46□□□□□ -1.22
HLA-DQA1-202ENST00000374949 TRAV9-2A0A087WT02 112 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 NBDYA0A0U1RRE5 68 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 A0A1B0GUV1 79 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 F8VRH5 84 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 PLNP26678 52 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 ESRGQ1W209 222 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 Q6ZUT4 128 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 C6orf223Q8N319 242 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 C2orf88Q9BSF0 95 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 VAMP8Q9BV40 100 aa7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 APOBP04114 4563 aaKnown RBP7.45□□□□□ -1.22
HLA-DQA1-202ENST00000374949 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
HLA-DQA1-202ENST00000374949 RNASE13Q5GAN3 156 aaKnown RBP7.44□□□□□ -1.22
HLA-DQA1-202ENST00000374949 Q8N1X5 172 aa7.44□□□□□ -1.22
HLA-DQA1-202ENST00000374949 HERC1Q15751 4861 aa7.43□□□□□ -1.22
HLA-DQA1-202ENST00000374949 RBX1P62877 108 aa7.43□□□□□ -1.22
HLA-DQA1-202ENST00000374949 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
HLA-DQA1-202ENST00000374949 IGLV4-60A0A075B6I1 120 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms