RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 B9D2Q9BPU9 175 aa10.87□□□□□ -0.67
NIPAL3-204ENST00000374399 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
NIPAL3-204ENST00000374399 CSDC2Q9Y534 153 aaKnown RBP10.86□□□□□ -0.67
NIPAL3-204ENST00000374399 STAB2Q8WWQ8 2551 aa10.85□□□□□ -0.67
NIPAL3-204ENST00000374399 C11orf86A6NJI1 115 aa10.85□□□□□ -0.67
NIPAL3-204ENST00000374399 VCX2Q9H322 139 aa10.85□□□□□ -0.67
NIPAL3-204ENST00000374399 H7C423 109 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 IGLC3P0DOY3 106 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 PLNP26678 52 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 MRPL23Q16540 153 aaKnown RBP10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 TMEM97Q5BJF2 176 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 TSTD3H0UI37 97 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 H3BNG1 76 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 GAGE6Q13070 117 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 TP73-AS1Q9UF72 201 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
NIPAL3-204ENST00000374399 TCTAP57738 103 aa10.83□□□□□ -0.68
NIPAL3-204ENST00000374399 NFE4Q86UQ8 179 aa10.83□□□□□ -0.68
NIPAL3-204ENST00000374399 C14orf144Q96I85 54 aa10.83□□□□□ -0.68
NIPAL3-204ENST00000374399 DYNC2H1Q8NCM8 4307 aaKnown RBP10.83□□□□□ -0.68
NIPAL3-204ENST00000374399 DEFB131BA0A096LNP1 70 aa10.82□□□□□ -0.68
NIPAL3-204ENST00000374399 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
NIPAL3-204ENST00000374399 IGLV4-60A0A075B6I1 120 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 IGKV2D-26A0A0A0MRZ7 120 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 A0A0J9YXV3 536 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 HSBP1L1C9JCN9 74 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 CHCHD5Q9BSY4 110 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 UBE2L6O14933 153 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 DDTP30046 118 aa10.81□□□□□ -0.68
NIPAL3-204ENST00000374399 UBE2D1P51668 147 aa10.8□□□□□ -0.68
NIPAL3-204ENST00000374399 DGAT2L7PQ6IED9 249 aa10.8□□□□□ -0.68
NIPAL3-204ENST00000374399 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
NIPAL3-204ENST00000374399 MIEN1Q9BRT3 115 aa10.8□□□□□ -0.68
NIPAL3-204ENST00000374399 ZNF25P17030 456 aaPredicted RBP10.79□□□□□ -0.68
NIPAL3-204ENST00000374399 LYPD5Q6UWN5 251 aa10.79□□□□□ -0.68
NIPAL3-204ENST00000374399 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
NIPAL3-204ENST00000374399 AMMECR1LQ6DCA0 310 aa10.78□□□□□ -0.68
NIPAL3-204ENST00000374399 Q8N3U1 123 aa10.78□□□□□ -0.68
NIPAL3-204ENST00000374399 CHAC1Q9BUX1 264 aa10.78□□□□□ -0.68
NIPAL3-204ENST00000374399 ZNF22P17026 224 aaPredicted RBP10.78□□□□□ -0.68
NIPAL3-204ENST00000374399 DEFA6Q01524 100 aa10.78□□□□□ -0.68
NIPAL3-204ENST00000374399 MPV17L2Q567V2 206 aa10.78□□□□□ -0.68
NIPAL3-204ENST00000374399 TRAV10A0A0B4J240 114 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 A0A1B0GUV1 79 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 COX8AP10176 69 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 RBX1P62877 108 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 LELP1Q5T871 98 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 FAM19A3Q7Z5A8 133 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 PCP2Q8IVA1 136 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 UQCR10Q9UDW1 63 aa10.77□□□□□ -0.69
NIPAL3-204ENST00000374399 TIRAPP58753 221 aa10.76□□□□□ -0.69
NIPAL3-204ENST00000374399 SMAGPQ0VAQ4 97 aa10.76□□□□□ -0.69
NIPAL3-204ENST00000374399 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
NIPAL3-204ENST00000374399 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 COX6A2Q02221 97 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 LINC00242Q5T6M2 205 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 TMEM101Q96IK0 257 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 DNAH7Q8WXX0 4024 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 BOD1L2Q8IYS8 172 aa10.75□□□□□ -0.69
NIPAL3-204ENST00000374399 TMEM223A0PJW6 202 aa10.74□□□□□ -0.69
NIPAL3-204ENST00000374399 E9PLD3 99 aa10.74□□□□□ -0.69
NIPAL3-204ENST00000374399 NMUP48645 174 aa10.74□□□□□ -0.69
NIPAL3-204ENST00000374399 ESRGQ1W209 222 aa10.74□□□□□ -0.69
NIPAL3-204ENST00000374399 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
NIPAL3-204ENST00000374399 IGLV5-45A0A087WSX0 123 aa10.73□□□□□ -0.69
NIPAL3-204ENST00000374399 TRAV13-1A0A0B4J241 112 aa10.73□□□□□ -0.69
NIPAL3-204ENST00000374399 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
NIPAL3-204ENST00000374399 SLC25A34Q6PIV7 304 aa10.73□□□□□ -0.69
NIPAL3-204ENST00000374399 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
NIPAL3-204ENST00000374399 NHLRC4P0CG21 123 aaPredicted RBP10.72□□□□□ -0.69
NIPAL3-204ENST00000374399 C2orf91Q6ZV80 131 aa10.72□□□□□ -0.69
NIPAL3-204ENST00000374399 CSMD3Q7Z407 3707 aa10.72□□□□□ -0.69
NIPAL3-204ENST00000374399 TSPEAR-AS2P59090 65 aa10.72□□□□□ -0.69
NIPAL3-204ENST00000374399 DLEU1O43261 78 aa10.71□□□□□ -0.69
NIPAL3-204ENST00000374399 PLECQ15149 4684 aaKnown RBP10.71□□□□□ -0.69
NIPAL3-204ENST00000374399 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.69
NIPAL3-204ENST00000374399 WFDC10BQ8IUB3 73 aa10.7□□□□□ -0.7
NIPAL3-204ENST00000374399 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
NIPAL3-204ENST00000374399 TRAV8-6A0A0B4J262 113 aa10.69□□□□□ -0.7
NIPAL3-204ENST00000374399 LINC00959A0A1B0GUT2 108 aa10.69□□□□□ -0.7
NIPAL3-204ENST00000374399 LINC00469Q8N7U9 141 aa10.69□□□□□ -0.7
NIPAL3-204ENST00000374399 GEMIN7Q9H840 131 aaKnown RBP10.69□□□□□ -0.7
NIPAL3-204ENST00000374399 FBN3Q75N90 2809 aa10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 IGKV3OR2-268A0A0C4DH90 116 aa10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 HNRNPA3P51991 378 aaKnown RBP10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 HERVK_113P63121 156 aa10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 CTAG1AP78358 180 aa10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 DNAH1Q9P2D7 4330 aa10.68□□□□□ -0.7
NIPAL3-204ENST00000374399 IGHV3-64A0A075B6Q5 118 aa10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 SPINK8P0C7L1 97 aa10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 HERVK_113P61574 105 aa10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 CLPSL2Q6UWE3 100 aa10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 LINC00269Q8N2A0 174 aa10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 MRPS16Q9Y3D3 137 aaKnown RBP10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 STARD9Q9P2P6 4700 aa10.67□□□□□ -0.7
NIPAL3-204ENST00000374399 IGHV3OR16-9A0A0B4J2B5 98 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms