RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 ZNF843Q8N446 348 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 FAM104AQ969W3 186 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 KIR2DL4Q99706 377 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 IGHV3-38A0A0C4DH36 116 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 APOMO95445 188 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 INSL3P51460 131 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 PMVKQ15126 192 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 UBE2E2Q96LR5 201 aa4.64□□□□□ -1.67
CHD6-202ENST00000373222 ATRQ13535 2644 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 AMELXQ99217 191 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 IGHV3OR16-12A0A075B7B8 117 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 LINC01549A6NIU2 74 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 RNASE1P07998 156 aaKnown RBP4.63□□□□□ -1.67
CHD6-202ENST00000373222 SRSF9Q13242 221 aaKnown RBP eCLIP4.63□□□□□ -1.67
CHD6-202ENST00000373222 ETDBQ3ZM63 59 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 FOXI2Q6ZQN5 318 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 WFDC11Q8NEX6 87 aa4.63□□□□□ -1.67
CHD6-202ENST00000373222 A0A0J9YY99 117 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 H3BMM0 161 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 K7ERU9 68 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 AZU1P20160 251 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 CRYBA4P53673 196 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 DSCR9P59020 149 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 RRN3P1Q2M238 152 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 MRPL16Q9NX20 251 aaKnown RBP4.62□□□□□ -1.67
CHD6-202ENST00000373222 TRAV8-3A0A0A6YYJ7 113 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 CD28P10747 220 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 HILS1P60008 231 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 OR5A1Q8NGJ0 315 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 MAP6D1Q9H9H5 199 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 XCL2Q9UBD3 114 aa4.62□□□□□ -1.67
CHD6-202ENST00000373222 IGLV4-3A0A075B6K6 122 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
CHD6-202ENST00000373222 TRBV6-5A0A0K0K1A5 114 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 IGKV2-29A2NJV5 120 aaPredicted RBP4.61□□□□□ -1.67
CHD6-202ENST00000373222 DEFB113Q30KQ7 82 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 C20orf203Q8NBC4 194 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 SYT8Q8NBV8 401 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 C11orf45Q8TAV5 145 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 TIMM17AQ99595 171 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 WFDC10AQ9H1F0 79 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 ESM1Q9NQ30 184 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
CHD6-202ENST00000373222 LOC107984156A0A0G2JMH3 177 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 A0A1B0GWB2 263 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 J3QQQ9 107 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 PPP1R17O96001 155 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
CHD6-202ENST00000373222 TRPT1Q86TN4 253 aaKnown RBP4.61□□□□□ -1.67
CHD6-202ENST00000373222 ARL17AQ8IVW1 177 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 ODF3Q96PU9 254 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
CHD6-202ENST00000373222 PKD1L1Q8TDX9 2849 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 A0A1B0GV72 72 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 LINC01619G3V211 115 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 H7C2G1 150 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 IGHV3-30P01768 117 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 IGHV3-30-5P0DP03 117 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 PLA2G2AP14555 144 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 NPC2P61916 151 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 RPL32P62910 135 aaKnown RBP4.6□□□□□ -1.67
CHD6-202ENST00000373222 Q6ZSV7 163 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 C10orf126Q8N4M7 172 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 SPANXB1Q9NS25 103 aaPredicted RBP4.6□□□□□ -1.67
CHD6-202ENST00000373222 TEP1Q99973 2627 aaKnown RBP4.6□□□□□ -1.67
CHD6-202ENST00000373222 I3L3M4 83 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 CFC1BP0CG36 223 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 CFC1P0CG37 223 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 UBE2D1P51668 147 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 NSUN5P1Q3KNT7 163 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 ODF3L2Q3SX64 289 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 CFAP126Q5VTH2 177 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 TMEM141Q96I45 108 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 LINC01587Q99440 93 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 OVOL2Q9BRP0 275 aa4.6□□□□□ -1.67
CHD6-202ENST00000373222 KMT2BQ9UMN6 2715 aaPredicted RBP4.59□□□□□ -1.67
CHD6-202ENST00000373222 TRAV2A0A0B4J234 112 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 TMEM223A0PJW6 202 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 IGHV3-53P01767 116 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 DEFB114Q30KQ6 69 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 NDUFA11Q86Y39 141 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 C11orf72Q8NBR9 251 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 ZNF418Q8TF45 676 aaPredicted RBP4.59□□□□□ -1.67
CHD6-202ENST00000373222 LINC00467Q9BRT7 94 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 HIVEP1P15822 2718 aa4.59□□□□□ -1.67
CHD6-202ENST00000373222 DNAJC9-AS1A6NH13 148 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 PSMB2P49721 201 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 PIK3CD-AS1Q5SR53 167 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 Q6ZUT4 128 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.58□□□□□ -1.68
CHD6-202ENST00000373222 SLC25A29Q8N8R3 303 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 DYNLRB2Q8TF09 96 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 A0A087WZ39 114 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 TINCRA0A1B0GVN0 87 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 LGALS3P17931 250 aaKnown RBP4.58□□□□□ -1.68
CHD6-202ENST00000373222 SAMD13Q5VXD3 122 aa4.58□□□□□ -1.68
CHD6-202ENST00000373222 NFE4Q86UQ8 179 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms