RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 F8W036 122 aa12.4□□□□□ -0.42
TRAPPC3-204ENST00000373166 SUMO2P61956 95 aaKnown RBP12.4□□□□□ -0.42
TRAPPC3-204ENST00000373166 MRPL51Q4U2R6 128 aaKnown RBP12.4□□□□□ -0.42
TRAPPC3-204ENST00000373166 NRACQ8N912 160 aa12.4□□□□□ -0.42
TRAPPC3-204ENST00000373166 TMEM101Q96IK0 257 aa12.4□□□□□ -0.42
TRAPPC3-204ENST00000373166 VCYO14598 125 aa12.39□□□□□ -0.43
TRAPPC3-204ENST00000373166 ESDP10768 282 aa12.39□□□□□ -0.43
TRAPPC3-204ENST00000373166 FCER1GP30273 86 aa12.39□□□□□ -0.43
TRAPPC3-204ENST00000373166 A0A1B0GXF2 115 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 LINC00862A6NCI5 91 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 CKS2P33552 79 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 ATP5L2Q7Z4Y8 100 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 OR5A1Q8NGJ0 315 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 KIR2DL4Q99706 377 aa12.38□□□□□ -0.43
TRAPPC3-204ENST00000373166 PRSS1P07477 247 aa12.37□□□□□ -0.43
TRAPPC3-204ENST00000373166 CLRN3Q8NCR9 226 aa12.37□□□□□ -0.43
TRAPPC3-204ENST00000373166 HNRNPA3P51991 378 aaKnown RBP12.36□□□□□ -0.43
TRAPPC3-204ENST00000373166 ANAPC16Q96DE5 110 aa12.36□□□□□ -0.43
TRAPPC3-204ENST00000373166 C20orf78Q9BR46 151 aa12.36□□□□□ -0.43
TRAPPC3-204ENST00000373166 GAGE12HA6NDE8 117 aa12.35□□□□□ -0.43
TRAPPC3-204ENST00000373166 IFITM2Q01629 132 aa12.35□□□□□ -0.43
TRAPPC3-204ENST00000373166 DGAT2L7PQ6IED9 249 aa12.35□□□□□ -0.43
TRAPPC3-204ENST00000373166 MRPL52Q86TS9 123 aaKnown RBP12.35□□□□□ -0.43
TRAPPC3-204ENST00000373166 hDV102S1A0JD36 115 aa12.34□□□□□ -0.43
TRAPPC3-204ENST00000373166 D6R8Y8 96 aa12.34□□□□□ -0.43
TRAPPC3-204ENST00000373166 SMAGPQ0VAQ4 97 aa12.34□□□□□ -0.43
TRAPPC3-204ENST00000373166 UQCC3Q6UW78 93 aa12.34□□□□□ -0.43
TRAPPC3-204ENST00000373166 CHCHD10Q8WYQ3 142 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC3-204ENST00000373166 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.44
TRAPPC3-204ENST00000373166 TNFRSF6BO95407 300 aa12.33□□□□□ -0.44
TRAPPC3-204ENST00000373166 PPBPP02775 128 aa12.33□□□□□ -0.44
TRAPPC3-204ENST00000373166 TCAPO15273 167 aa12.32□□□□□ -0.44
TRAPPC3-204ENST00000373166 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
TRAPPC3-204ENST00000373166 CFAP161Q6P656 301 aa12.32□□□□□ -0.44
TRAPPC3-204ENST00000373166 AP5S1Q9NUS5 200 aa12.32□□□□□ -0.44
TRAPPC3-204ENST00000373166 RNF213Q63HN8 5207 aa12.31□□□□□ -0.44
TRAPPC3-204ENST00000373166 PHOX2AO14813 284 aa12.31□□□□□ -0.44
TRAPPC3-204ENST00000373166 MT1HL1P0DM35 61 aa12.31□□□□□ -0.44
TRAPPC3-204ENST00000373166 TMEM18Q96B42 140 aa12.31□□□□□ -0.44
TRAPPC3-204ENST00000373166 SMIM2Q9BVW6 85 aa12.31□□□□□ -0.44
TRAPPC3-204ENST00000373166 NPYP01303 97 aa12.3□□□□□ -0.44
TRAPPC3-204ENST00000373166 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
TRAPPC3-204ENST00000373166 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
TRAPPC3-204ENST00000373166 CDC42SE2Q9NRR3 84 aa12.3□□□□□ -0.44
TRAPPC3-204ENST00000373166 LINC00959A0A1B0GUT2 108 aa12.29□□□□□ -0.44
TRAPPC3-204ENST00000373166 XCL1P47992 114 aa12.29□□□□□ -0.44
TRAPPC3-204ENST00000373166 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
TRAPPC3-204ENST00000373166 SS18Q15532 418 aa12.29□□□□□ -0.44
TRAPPC3-204ENST00000373166 Q6ZRU5 148 aa12.29□□□□□ -0.44
TRAPPC3-204ENST00000373166 C9orf163Q8N9P6 203 aa12.29□□□□□ -0.44
TRAPPC3-204ENST00000373166 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 TMEM218A2RU14 115 aa12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 CCL25O15444 150 aa12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 ADCYAP1P18509 176 aa12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 C15orf56Q8N910 161 aa12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
TRAPPC3-204ENST00000373166 FOXI1Q12951 378 aa12.27□□□□□ -0.45
TRAPPC3-204ENST00000373166 TMEM136Q6ZRR5 245 aa12.27□□□□□ -0.45
TRAPPC3-204ENST00000373166 COMMD7Q86VX2 200 aa12.26□□□□□ -0.45
TRAPPC3-204ENST00000373166 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
TRAPPC3-204ENST00000373166 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC3-204ENST00000373166 HIGD2BQ4VC39 106 aa12.25□□□□□ -0.45
TRAPPC3-204ENST00000373166 IMMP2LQ96T52 175 aa12.25□□□□□ -0.45
TRAPPC3-204ENST00000373166 LAMTOR2Q9Y2Q5 125 aa12.25□□□□□ -0.45
TRAPPC3-204ENST00000373166 LRP2P98164 4655 aa12.24□□□□□ -0.45
TRAPPC3-204ENST00000373166 IGHV3-64A0A075B6Q5 118 aa12.24□□□□□ -0.45
TRAPPC3-204ENST00000373166 SEC11CQ9BY50 192 aa12.24□□□□□ -0.45
TRAPPC3-204ENST00000373166 CTDSP1Q9GZU7 261 aa12.24□□□□□ -0.45
TRAPPC3-204ENST00000373166 GVQW2A0A096LPI5 108 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC3-204ENST00000373166 RAB5AP20339 215 aa12.23□□□□□ -0.45
TRAPPC3-204ENST00000373166 RNASE13Q5GAN3 156 aaKnown RBP12.23□□□□□ -0.45
TRAPPC3-204ENST00000373166 CD164L2Q6UWJ8 174 aa12.23□□□□□ -0.45
TRAPPC3-204ENST00000373166 Q6ZUT4 128 aa12.23□□□□□ -0.45
TRAPPC3-204ENST00000373166 C1orf196B1AJZ1 125 aa12.22□□□□□ -0.45
TRAPPC3-204ENST00000373166 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
TRAPPC3-204ENST00000373166 SDIM1Q6ZPB5 146 aa12.22□□□□□ -0.45
TRAPPC3-204ENST00000373166 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
TRAPPC3-204ENST00000373166 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
TRAPPC3-204ENST00000373166 TNXBP22105 4242 aa12.22□□□□□ -0.45
TRAPPC3-204ENST00000373166 IGHV1-58A0A0C4DH39 117 aa12.21□□□□□ -0.45
TRAPPC3-204ENST00000373166 PANO1I0J062 215 aa12.21□□□□□ -0.45
TRAPPC3-204ENST00000373166 TRAV13-1A0A0B4J241 112 aa12.2□□□□□ -0.46
TRAPPC3-204ENST00000373166 SLPIP03973 132 aa12.2□□□□□ -0.46
TRAPPC3-204ENST00000373166 TRAV9-1A0A075B6T8 112 aa12.19□□□□□ -0.46
TRAPPC3-204ENST00000373166 LOC389332A0A1B0GUA5 103 aa12.18□□□□□ -0.46
TRAPPC3-204ENST00000373166 PRSS47A8MTI9 375 aa12.18□□□□□ -0.46
TRAPPC3-204ENST00000373166 S100PP25815 95 aa12.18□□□□□ -0.46
TRAPPC3-204ENST00000373166 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
TRAPPC3-204ENST00000373166 COX7A2LO14548 114 aa12.17□□□□□ -0.46
TRAPPC3-204ENST00000373166 MALP21145 153 aa12.17□□□□□ -0.46
TRAPPC3-204ENST00000373166 IFI27P40305 119 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC3-204ENST00000373166 ZNF561-AS1K7EIQ3 104 aa12.16□□□□□ -0.46
TRAPPC3-204ENST00000373166 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-204ENST00000373166 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-204ENST00000373166 Q8N8P6 123 aa12.16□□□□□ -0.46
TRAPPC3-204ENST00000373166 IFITM10A6NMD0 228 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1745.3 ms