RNA–Protein interactions for RNA: ENST00000373063.7

FOXP4-204, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 5,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-204ENST00000373063 DCANP1Q8TF63 244 aa16.58■□□□□ 0.25
FOXP4-204ENST00000373063 MLST8Q9BVC4 326 aa16.58■□□□□ 0.25
FOXP4-204ENST00000373063 LOC107984640A0A0U1RRK4 108 aa16.58■□□□□ 0.24
FOXP4-204ENST00000373063 TMEM223A0PJW6 202 aa16.58■□□□□ 0.24
FOXP4-204ENST00000373063 BPY2O14599 106 aa16.58■□□□□ 0.24
FOXP4-204ENST00000373063 LINC00526Q96FQ7 95 aa16.58■□□□□ 0.24
FOXP4-204ENST00000373063 PPDPFQ9H3Y8 114 aa16.58■□□□□ 0.24
FOXP4-204ENST00000373063 MUC22E2RYF6 1773 aaPredicted RBP16.57■□□□□ 0.24
FOXP4-204ENST00000373063 CASC2Q6XLA1 102 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 TEN1Q86WV5 123 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 SPANXB1Q9NS25 103 aaPredicted RBP16.57■□□□□ 0.24
FOXP4-204ENST00000373063 PRM2P04554 102 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 ZNF295-AS1Q8N0V1 137 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 IGLV4-69A0A075B6H9 119 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 CD164L2Q6UWJ8 174 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 UPK3BQ9BT76 320 aa16.57■□□□□ 0.24
FOXP4-204ENST00000373063 ZNF22P17026 224 aaPredicted RBP16.56■□□□□ 0.24
FOXP4-204ENST00000373063 H3BT86 120 aa16.56■□□□□ 0.24
FOXP4-204ENST00000373063 CRIP1P50238 77 aa16.56■□□□□ 0.24
FOXP4-204ENST00000373063 PTPN13Q12923 2485 aa16.56■□□□□ 0.24
FOXP4-204ENST00000373063 ANKHD1Q8IWZ3 2542 aaKnown RBP16.55■□□□□ 0.24
FOXP4-204ENST00000373063 UBE2D3P61077 147 aa16.54■□□□□ 0.24
FOXP4-204ENST00000373063 PIK3CD-AS1Q5SR53 167 aa16.54■□□□□ 0.24
FOXP4-204ENST00000373063 ATOX1O00244 68 aa16.54■□□□□ 0.24
FOXP4-204ENST00000373063 HRCT1Q6UXD1 115 aa16.54■□□□□ 0.24
FOXP4-204ENST00000373063 FOXI1Q12951 378 aa16.53■□□□□ 0.24
FOXP4-204ENST00000373063 ARHGAP21Q5T5U3 1957 aa16.53■□□□□ 0.24
FOXP4-204ENST00000373063 TRAV23DV6A0A075B6W5 121 aa16.52■□□□□ 0.24
FOXP4-204ENST00000373063 MRGPRG-AS1Q2M3A8 158 aa16.52■□□□□ 0.23
FOXP4-204ENST00000373063 PRR9Q5T870 116 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 FAM236AA0A1B0GUQ0 79 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 FAM236BA0A1B0GV22 79 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 WFDC2Q14508 124 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 LINC00474Q9P2X8 69 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 SPG11Q96JI7 2443 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 SLPIP03973 132 aa16.51■□□□□ 0.23
FOXP4-204ENST00000373063 SPINK6Q6UWN8 80 aa16.5■□□□□ 0.23
FOXP4-204ENST00000373063 LINC00959A0A1B0GUT2 108 aa16.5■□□□□ 0.23
FOXP4-204ENST00000373063 RNASE3P12724 160 aaKnown RBP16.5■□□□□ 0.23
FOXP4-204ENST00000373063 BRI3O95415 125 aa16.49■□□□□ 0.23
FOXP4-204ENST00000373063 LINC00308Q8TCZ7 52 aa16.49■□□□□ 0.23
FOXP4-204ENST00000373063 PLAC8L1A1L4L8 177 aa16.49■□□□□ 0.23
FOXP4-204ENST00000373063 KLLNB2CW77 178 aa16.49■□□□□ 0.23
FOXP4-204ENST00000373063 RNF185Q96GF1 192 aa16.49■□□□□ 0.23
FOXP4-204ENST00000373063 RPL37AP8A6NKH3 93 aa16.48■□□□□ 0.23
FOXP4-204ENST00000373063 SMIM20Q8N5G0 67 aa16.48■□□□□ 0.23
FOXP4-204ENST00000373063 TSHBP01222 138 aa16.48■□□□□ 0.23
FOXP4-204ENST00000373063 CSPG4Q6UVK1 2322 aa16.47■□□□□ 0.23
FOXP4-204ENST00000373063 EDN2P20800 178 aa16.47■□□□□ 0.23
FOXP4-204ENST00000373063 C16orf95Q9H693 158 aa16.47■□□□□ 0.23
FOXP4-204ENST00000373063 U3KQK5 164 aa16.47■□□□□ 0.23
FOXP4-204ENST00000373063 M0R378 163 aa16.47■□□□□ 0.23
FOXP4-204ENST00000373063 TCL1BO95988 128 aa16.45■□□□□ 0.22
FOXP4-204ENST00000373063 IGLV9-49A0A0B4J1Y8 123 aa16.45■□□□□ 0.22
FOXP4-204ENST00000373063 TRBV27A0A0K0K1C4 114 aa16.45■□□□□ 0.22
FOXP4-204ENST00000373063 C6orf99Q4VX62 202 aa16.45■□□□□ 0.22
FOXP4-204ENST00000373063 TRBV6-5A0A0K0K1A5 114 aa16.44■□□□□ 0.22
FOXP4-204ENST00000373063 PYGO1Q9Y3Y4 419 aa16.44■□□□□ 0.22
FOXP4-204ENST00000373063 SPATA12Q7Z6I5 190 aa16.44■□□□□ 0.22
FOXP4-204ENST00000373063 IGLV2-11P01706 119 aa16.44■□□□□ 0.22
FOXP4-204ENST00000373063 ODF3L2Q3SX64 289 aa16.44■□□□□ 0.22
FOXP4-204ENST00000373063 C1orf158Q8N1D5 194 aa16.43■□□□□ 0.22
FOXP4-204ENST00000373063 IGLV1-51P01701 117 aa16.43■□□□□ 0.22
FOXP4-204ENST00000373063 DHRS4-AS1Q9P1J3 65 aa16.43■□□□□ 0.22
FOXP4-204ENST00000373063 SCXQ7RTU7 201 aa16.43■□□□□ 0.22
FOXP4-204ENST00000373063 IGLV5-52A0A0A0MRZ9 124 aa16.42■□□□□ 0.22
FOXP4-204ENST00000373063 WFDC10BQ8IUB3 73 aa16.42■□□□□ 0.22
FOXP4-204ENST00000373063 TAX1BP3O14907 124 aa16.42■□□□□ 0.22
FOXP4-204ENST00000373063 A8MZ25 164 aa16.42■□□□□ 0.22
FOXP4-204ENST00000373063 KIAA1549Q9HCM3 1950 aa16.41■□□□□ 0.22
FOXP4-204ENST00000373063 USP17L23D6RBM5 183 aa16.41■□□□□ 0.22
FOXP4-204ENST00000373063 C11orf21Q9P2W6 132 aa16.4■□□□□ 0.22
FOXP4-204ENST00000373063 PTH2Q96A98 100 aa16.4■□□□□ 0.22
FOXP4-204ENST00000373063 SS18L2Q9UHA2 77 aa16.39■□□□□ 0.21
FOXP4-204ENST00000373063 C10orf142B7Z368 130 aa16.39■□□□□ 0.21
FOXP4-204ENST00000373063 A0A1W2PPR1 153 aa16.39■□□□□ 0.21
FOXP4-204ENST00000373063 PCNX3Q9H6A9 2034 aa16.39■□□□□ 0.21
FOXP4-204ENST00000373063 UBE2D2P62837 147 aa16.39■□□□□ 0.21
FOXP4-204ENST00000373063 LRP4O75096 1905 aa16.38■□□□□ 0.21
FOXP4-204ENST00000373063 PRRC2AP48634 2157 aaKnown RBP16.38■□□□□ 0.21
FOXP4-204ENST00000373063 Q6ZTC4 211 aa16.37■□□□□ 0.21
FOXP4-204ENST00000373063 CCKP06307 115 aa16.37■□□□□ 0.21
FOXP4-204ENST00000373063 B5MCH6 92 aa16.36■□□□□ 0.21
FOXP4-204ENST00000373063 C3orf84H3BNL1 204 aa16.36■□□□□ 0.21
FOXP4-204ENST00000373063 MRPS36P82909 103 aaKnown RBP16.35■□□□□ 0.21
FOXP4-204ENST00000373063 HIVEP3Q5T1R4 2406 aa16.35■□□□□ 0.21
FOXP4-204ENST00000373063 NRACQ8N912 160 aa16.34■□□□□ 0.21
FOXP4-204ENST00000373063 SONP18583 2426 aaKnown RBP16.33■□□□□ 0.21
FOXP4-204ENST00000373063 PRR14LQ5THK1 2151 aa16.33■□□□□ 0.21
FOXP4-204ENST00000373063 M0QXV9 152 aa16.32■□□□□ 0.2
FOXP4-204ENST00000373063 PTPRSQ13332 1948 aa16.32■□□□□ 0.2
FOXP4-204ENST00000373063 C1orf134Q5TEV5 83 aa16.32■□□□□ 0.2
FOXP4-204ENST00000373063 CYSRT1A8MQ03 144 aa16.31■□□□□ 0.2
FOXP4-204ENST00000373063 COX17Q14061 63 aa16.31■□□□□ 0.2
FOXP4-204ENST00000373063 LINC00643Q86TS7 51 aa16.3■□□□□ 0.2
FOXP4-204ENST00000373063 RPL28P46779 137 aaKnown RBP16.3■□□□□ 0.2
FOXP4-204ENST00000373063 MAPKAPK5-AS1Q8N8E1 139 aa16.3■□□□□ 0.2
FOXP4-204ENST00000373063 WNK1Q9H4A3 2382 aa16.3■□□□□ 0.2
FOXP4-204ENST00000373063 COL5A1P20908 1838 aaPredicted RBP16.3■□□□□ 0.2
FOXP4-204ENST00000373063 TEX49A0A1B0GTD5 131 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms