RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 OVOL2Q9BRP0 275 aa13.35□□□□□ -0.27
MMP9-201ENST00000372330 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
MMP9-201ENST00000372330 SYNJ2BPP57105 145 aa13.34□□□□□ -0.27
MMP9-201ENST00000372330 USP17L23D6RBM5 183 aa13.34□□□□□ -0.27
MMP9-201ENST00000372330 FLNCQ14315 2725 aa13.33□□□□□ -0.28
MMP9-201ENST00000372330 BRD3OSQ6XYD6 125 aa13.33□□□□□ -0.28
MMP9-201ENST00000372330 Q8N2B8 174 aa13.33□□□□□ -0.28
MMP9-201ENST00000372330 NDUFC2O95298 119 aa13.33□□□□□ -0.28
MMP9-201ENST00000372330 UNQ9165/PRO28630Q6UXU0 137 aa13.33□□□□□ -0.28
MMP9-201ENST00000372330 UTP20O75691 2785 aaKnown RBP13.32□□□□□ -0.28
MMP9-201ENST00000372330 IGHV4-61A0A0C4DH41 118 aa13.32□□□□□ -0.28
MMP9-201ENST00000372330 PF4P02776 101 aa13.32□□□□□ -0.28
MMP9-201ENST00000372330 PIMREGQ9BSJ6 248 aa13.32□□□□□ -0.28
MMP9-201ENST00000372330 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
MMP9-201ENST00000372330 HIST2H2BCQ6DN03 193 aa13.31□□□□□ -0.28
MMP9-201ENST00000372330 HIST2H2BDQ6DRA6 164 aa13.31□□□□□ -0.28
MMP9-201ENST00000372330 RNF152Q8N8N0 203 aa13.3□□□□□ -0.28
MMP9-201ENST00000372330 LINC01561Q8N1V8 128 aa13.3□□□□□ -0.28
MMP9-201ENST00000372330 FAM218AQ96MZ4 157 aa13.3□□□□□ -0.28
MMP9-201ENST00000372330 UBE2D4Q9Y2X8 147 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 SPG11Q96JI7 2443 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 CRYBG3Q68DQ2 2970 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 IGKV3D-7A0A0C4DH55 119 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 C10orf105Q8TEF2 133 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 CCL19Q99731 98 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 CDKN2A-AS1Q9UH64 79 aa13.29□□□□□ -0.28
MMP9-201ENST00000372330 RPL28P46779 137 aaKnown RBP13.28□□□□□ -0.28
MMP9-201ENST00000372330 RNASE13Q5GAN3 156 aaKnown RBP13.28□□□□□ -0.28
MMP9-201ENST00000372330 Q9H8V8 135 aa13.28□□□□□ -0.28
MMP9-201ENST00000372330 NACAE9PAV3 2078 aa13.28□□□□□ -0.28
MMP9-201ENST00000372330 IGHV4-38-2P0DP08 117 aa13.28□□□□□ -0.28
MMP9-201ENST00000372330 PRO0628Q9UI54 55 aa13.28□□□□□ -0.28
MMP9-201ENST00000372330 IGLV5-39A0A0G2JS06 123 aa13.27□□□□□ -0.28
MMP9-201ENST00000372330 OBSCN-AS1Q96MR7 158 aa13.27□□□□□ -0.28
MMP9-201ENST00000372330 IGHV1OR15-1A0A075B7D0 117 aa13.27□□□□□ -0.29
MMP9-201ENST00000372330 RHPN1-AS1Q9BWJ2 59 aa13.27□□□□□ -0.29
MMP9-201ENST00000372330 LINC00846Q9NV44 126 aa13.27□□□□□ -0.29
MMP9-201ENST00000372330 USP9XQ93008 2570 aaPredicted RBP13.26□□□□□ -0.29
MMP9-201ENST00000372330 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
MMP9-201ENST00000372330 TRAV13-2A0A0B4J235 113 aa13.26□□□□□ -0.29
MMP9-201ENST00000372330 TRBV12-3P01733 135 aa13.26□□□□□ -0.29
MMP9-201ENST00000372330 PRB1P04280 392 aa13.26□□□□□ -0.29
MMP9-201ENST00000372330 IGHG2P01859 326 aa13.25□□□□□ -0.29
MMP9-201ENST00000372330 LY6EQ16553 131 aa13.25□□□□□ -0.29
MMP9-201ENST00000372330 SOSTDC1Q6X4U4 206 aa13.25□□□□□ -0.29
MMP9-201ENST00000372330 DOPEY1Q5JWR5 2465 aa13.25□□□□□ -0.29
MMP9-201ENST00000372330 IGKV3-7A0A075B6H7 116 aa13.25□□□□□ -0.29
MMP9-201ENST00000372330 Q9HAA7 133 aa13.25□□□□□ -0.29
MMP9-201ENST00000372330 H3BUA1 57 aa13.24□□□□□ -0.29
MMP9-201ENST00000372330 H3BUX3 64 aa13.24□□□□□ -0.29
MMP9-201ENST00000372330 CHCHD7Q9BUK0 85 aa13.24□□□□□ -0.29
MMP9-201ENST00000372330 A0A087WVE0 104 aa13.24□□□□□ -0.29
MMP9-201ENST00000372330 USMG5Q96IX5 58 aa13.24□□□□□ -0.29
MMP9-201ENST00000372330 FHL2Q14192 279 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 CSMD2Q7Z408 3487 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 IGHV4-30-2A0A087WSY4 118 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 A6NDX4 124 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 C14orf132Q9NPU4 83 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 ZFYVE26Q68DK2 2539 aa13.23□□□□□ -0.29
MMP9-201ENST00000372330 PSMB8P28062 276 aa13.22□□□□□ -0.29
MMP9-201ENST00000372330 PFN2P35080 140 aa13.22□□□□□ -0.29
MMP9-201ENST00000372330 H0YGX0 51 aa13.21□□□□□ -0.29
MMP9-201ENST00000372330 RS1O15537 224 aa13.21□□□□□ -0.29
MMP9-201ENST00000372330 IGHV3-11P01762 117 aa13.21□□□□□ -0.29
MMP9-201ENST00000372330 MSMBP08118 114 aa13.21□□□□□ -0.29
MMP9-201ENST00000372330 BLCAPP62952 87 aa13.21□□□□□ -0.29
MMP9-201ENST00000372330 BBC3Q96PG8 261 aaPredicted RBP13.21□□□□□ -0.29
MMP9-201ENST00000372330 EPM2AB3EWF7 344 aa13.21□□□□□ -0.3
MMP9-201ENST00000372330 ATP5EP2Q5VTU8 51 aa13.21□□□□□ -0.3
MMP9-201ENST00000372330 MYO18BQ8IUG5 2567 aa13.2□□□□□ -0.3
MMP9-201ENST00000372330 A0A0U1RRA0 63 aa13.19□□□□□ -0.3
MMP9-201ENST00000372330 ZNF625Q96I27 306 aaPredicted RBP13.19□□□□□ -0.3
MMP9-201ENST00000372330 TRAV12-2A0A075B6T6 113 aa13.19□□□□□ -0.3
MMP9-201ENST00000372330 CRPP02741 224 aa13.18□□□□□ -0.3
MMP9-201ENST00000372330 SERP1Q9Y6X1 66 aa13.18□□□□□ -0.3
MMP9-201ENST00000372330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.18□□□□□ -0.3
MMP9-201ENST00000372330 IGKV2-29A2NJV5 120 aaPredicted RBP13.18□□□□□ -0.3
MMP9-201ENST00000372330 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
MMP9-201ENST00000372330 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
MMP9-201ENST00000372330 FAM236DA0A1B0GTK5 79 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
MMP9-201ENST00000372330 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
MMP9-201ENST00000372330 IGLV1-40P01703 118 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
MMP9-201ENST00000372330 RBMY1A1P0DJD3 496 aaKnown RBP13.17□□□□□ -0.3
MMP9-201ENST00000372330 RBMY1CP0DJD4 496 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 FAM236CP0DP71 79 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 RBMY1FQ15415 496 aaKnown RBP13.17□□□□□ -0.3
MMP9-201ENST00000372330 FAM19A3Q7Z5A8 133 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 GHRHP01286 108 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 DGAT2L7PQ6IED9 249 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
MMP9-201ENST00000372330 K7EMT4 169 aa13.16□□□□□ -0.3
MMP9-201ENST00000372330 HOXD3P31249 432 aaPredicted RBP13.16□□□□□ -0.3
MMP9-201ENST00000372330 F8WDY8 70 aa13.16□□□□□ -0.3
MMP9-201ENST00000372330 ZNF462Q96JM2 2506 aa13.15□□□□□ -0.3
MMP9-201ENST00000372330 B4DSR2 109 aa13.15□□□□□ -0.3
MMP9-201ENST00000372330 AVPP01185 164 aa13.15□□□□□ -0.3
MMP9-201ENST00000372330 COX6A2Q02221 97 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms