RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 IGHV3OR16-12A0A075B7B8 117 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 LOC107984156A0A0G2JMH3 177 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 IGKV2-29A2NJV5 120 aaPredicted RBP12.99□□□□□ -0.33
CD40-201ENST00000372276 ARL17AQ8IVW1 177 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 PRO0461Q9UI25 63 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 ZNF469Q96JG9 3925 aaPredicted RBP12.99□□□□□ -0.33
CD40-201ENST00000372276 H7C423 109 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 WFDC2Q14508 124 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 GTSF1LQ9H1H1 148 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
CD40-201ENST00000372276 HIVEP1P15822 2718 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 TEX48A0A1B0GUV7 120 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 A4D1N5 150 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 IFITM1P13164 125 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 ZFAND6Q6FIF0 208 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 Q6ZUT4 128 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 OVOL2Q9BRP0 275 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 ERG28Q9UKR5 140 aa12.98□□□□□ -0.33
CD40-201ENST00000372276 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
CD40-201ENST00000372276 MUSTN1Q8IVN3 82 aa12.97□□□□□ -0.33
CD40-201ENST00000372276 COPS9Q8WXC6 57 aa12.97□□□□□ -0.33
CD40-201ENST00000372276 FLNAP21333 2647 aaKnown RBP12.97□□□□□ -0.33
CD40-201ENST00000372276 PSMB2P49721 201 aa12.96□□□□□ -0.33
CD40-201ENST00000372276 IGHV3-64A0A075B6Q5 118 aa12.95□□□□□ -0.34
CD40-201ENST00000372276 IGHV3-38A0A0C4DH36 116 aa12.95□□□□□ -0.34
CD40-201ENST00000372276 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
CD40-201ENST00000372276 CIRBPQ14011 172 aaKnown RBP12.95□□□□□ -0.34
CD40-201ENST00000372276 Q9UF83 564 aa12.95□□□□□ -0.34
CD40-201ENST00000372276 SCGB1C2P0DMR2 95 aa12.95□□□□□ -0.34
CD40-201ENST00000372276 Q6ZTI0 123 aa12.95□□□□□ -0.34
CD40-201ENST00000372276 M0QXV9 152 aa12.94□□□□□ -0.34
CD40-201ENST00000372276 IGHV3-33P01772 117 aa12.94□□□□□ -0.34
CD40-201ENST00000372276 MIAQ16674 131 aa12.94□□□□□ -0.34
CD40-201ENST00000372276 NOP10Q9NPE3 64 aaKnown RBP12.94□□□□□ -0.34
CD40-201ENST00000372276 C19orf73Q9NVV2 129 aa12.94□□□□□ -0.34
CD40-201ENST00000372276 F8P00451 2351 aa12.93□□□□□ -0.34
CD40-201ENST00000372276 NDUFA1O15239 70 aa12.93□□□□□ -0.34
CD40-201ENST00000372276 TMEM101Q96IK0 257 aa12.93□□□□□ -0.34
CD40-201ENST00000372276 TRAV8-3A0A0A6YYJ7 113 aa12.92□□□□□ -0.34
CD40-201ENST00000372276 GIG44P09565 113 aaPredicted RBP12.92□□□□□ -0.34
CD40-201ENST00000372276 ETDBQ3ZM63 59 aa12.92□□□□□ -0.34
CD40-201ENST00000372276 SBSPONQ8IVN8 264 aa12.92□□□□□ -0.34
CD40-201ENST00000372276 LITAFQ99732 161 aa12.92□□□□□ -0.34
CD40-201ENST00000372276 TRGV2A0A075B6R0 118 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 ADARB2-AS1A8MUL3 147 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 ACANP16112 2415 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 IGLV5-39A0A0G2JS06 123 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 UBE2L6O14933 153 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 SPINK8P0C7L1 97 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 RNASE13Q5GAN3 156 aaKnown RBP12.91□□□□□ -0.34
CD40-201ENST00000372276 CSNK1G2-AS1Q8NCQ2 148 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
CD40-201ENST00000372276 TLN2Q9Y4G6 2542 aa12.9□□□□□ -0.34
CD40-201ENST00000372276 PRSS2P07478 247 aa12.9□□□□□ -0.34
CD40-201ENST00000372276 HIST2H2BDQ6DRA6 164 aa12.9□□□□□ -0.34
CD40-201ENST00000372276 CDKN2A-AS1Q9UH64 79 aa12.9□□□□□ -0.34
CD40-201ENST00000372276 TRBV30A0A0K0K1B3 111 aa12.89□□□□□ -0.35
CD40-201ENST00000372276 TCL1BO95988 128 aa12.89□□□□□ -0.35
CD40-201ENST00000372276 PPDPFQ9H3Y8 114 aa12.89□□□□□ -0.35
CD40-201ENST00000372276 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
CD40-201ENST00000372276 PLAC8L1A1L4L8 177 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 GAGE12JA6NER3 117 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 INSL3P51460 131 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 GAGE4Q13068 117 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 GAGE5Q13069 117 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 LINC00242Q5T6M2 205 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
CD40-201ENST00000372276 HERV-K104P63124 156 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 SH2D6Q7Z4S9 175 aa12.88□□□□□ -0.35
CD40-201ENST00000372276 TRGV4A0A0C4DH28 118 aa12.87□□□□□ -0.35
CD40-201ENST00000372276 COX6CP09669 75 aa12.87□□□□□ -0.35
CD40-201ENST00000372276 ATXN8Q156A1 80 aa12.87□□□□□ -0.35
CD40-201ENST00000372276 NTM-AS1Q6ZSK4 140 aa12.87□□□□□ -0.35
CD40-201ENST00000372276 SONP18583 2426 aaKnown RBP12.87□□□□□ -0.35
CD40-201ENST00000372276 GAGE7O76087 117 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 PF4P02776 101 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 FOXI1Q12951 378 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 Q1RN00 199 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 TEN1Q86WV5 123 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 PPDPFLQ8WWR9 84 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
CD40-201ENST00000372276 SMIM9A6NGZ8 99 aa12.85□□□□□ -0.35
CD40-201ENST00000372276 SCGB1A1P11684 91 aa12.85□□□□□ -0.35
CD40-201ENST00000372276 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
CD40-201ENST00000372276 LINC01600Q96MT4 127 aa12.85□□□□□ -0.35
CD40-201ENST00000372276 SMR3AQ99954 134 aa12.85□□□□□ -0.35
CD40-201ENST00000372276 SPATA25Q9BR10 227 aa12.85□□□□□ -0.35
CD40-201ENST00000372276 SIGMAR1Q99720 223 aa12.84□□□□□ -0.35
CD40-201ENST00000372276 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
CD40-201ENST00000372276 LY6G6DO95868 133 aa12.84□□□□□ -0.35
CD40-201ENST00000372276 LINC00694P0DN24 101 aa12.84□□□□□ -0.35
CD40-201ENST00000372276 SMCPP49901 116 aaPredicted RBP12.84□□□□□ -0.35
CD40-201ENST00000372276 ADAMTSL4-AS1Q5T5F5 129 aa12.84□□□□□ -0.35
CD40-201ENST00000372276 TEP1Q99973 2627 aaKnown RBP12.83□□□□□ -0.36
CD40-201ENST00000372276 SFTA2Q6UW10 78 aa12.83□□□□□ -0.36
CD40-201ENST00000372276 LINC00482Q8N8I6 264 aa12.83□□□□□ -0.36
CD40-201ENST00000372276 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms