RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 MYO18BQ8IUG5 2567 aa6.5□□□□□ -1.37
ATG4A-203ENST00000372232 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
ATG4A-203ENST00000372232 KNCNA6PVL3 124 aa6.5□□□□□ -1.37
ATG4A-203ENST00000372232 UBR5O95071 2799 aaPredicted RBP6.5□□□□□ -1.37
ATG4A-203ENST00000372232 IGKV3D-20A0A0C4DH25 116 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 M0R381 172 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 TIMM17AQ99595 171 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 C22orf24Q9Y442 160 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 FLNCQ14315 2725 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 IGHG2P01859 326 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 KLK9Q2XQG4 91 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 TMEM61Q8N0U2 210 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 KLK9Q9UKQ9 250 aa6.49□□□□□ -1.37
ATG4A-203ENST00000372232 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.49□□□□□ -1.37
ATG4A-203ENST00000372232 GCN1Q92616 2671 aaKnown RBP6.48□□□□□ -1.37
ATG4A-203ENST00000372232 A0A087WVE0 104 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 ATP6V0E1O15342 81 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 PLA2G2AP14555 144 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 ECSCRQ19T08 205 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 C15orf32Q32M92 178 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 RNF182Q8N6D2 247 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 UBE2D4Q9Y2X8 147 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 TENM4Q6N022 2769 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 FASNP49327 2511 aaKnown RBP6.48□□□□□ -1.37
ATG4A-203ENST00000372232 IGKV3D-7A0A0C4DH55 119 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 H7BZZ5 65 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 COX7A2LO14548 114 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 Q6ZSV7 163 aa6.48□□□□□ -1.37
ATG4A-203ENST00000372232 XCL1P47992 114 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 C1orf158Q8N1D5 194 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 MRPL53Q96EL3 112 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 Q9H8V8 135 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 XCL2Q9UBD3 114 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RBMY1BA6NDE4 496 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RBMY1EA6NEQ0 496 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 G3V318 75 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RBMY1DP0C7P1 496 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RBMY1A1P0DJD3 496 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RBMY1CP0DJD4 496 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 RBMY1FQ15415 496 aaKnown RBP6.47□□□□□ -1.37
ATG4A-203ENST00000372232 MIAQ16674 131 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 C5orf56Q8N8D9 126 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 C11orf21Q9P2W6 132 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 SMAD5-AS1Q9Y6J3 95 aa6.47□□□□□ -1.37
ATG4A-203ENST00000372232 IGHV3-35A0A0C4DH35 117 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV4-61A0A0C4DH41 118 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 PPP1R17O96001 155 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 LYPD5Q6UWN5 251 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 CCL19Q99731 98 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 DOPEY1Q5JWR5 2465 aa6.46□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV3OR16-8A0A075B7F1 116 aa6.45□□□□□ -1.38
ATG4A-203ENST00000372232 VSIG2Q96IQ7 327 aa6.45□□□□□ -1.38
ATG4A-203ENST00000372232 CELSR1Q9NYQ6 3014 aa6.45□□□□□ -1.38
ATG4A-203ENST00000372232 J3QKU1 62 aa6.45□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV1-69P01742 117 aa6.45□□□□□ -1.38
ATG4A-203ENST00000372232 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
ATG4A-203ENST00000372232 MAP1AP78559 2803 aaPredicted RBP6.45□□□□□ -1.38
ATG4A-203ENST00000372232 USP9XQ93008 2570 aaPredicted RBP6.45□□□□□ -1.38
ATG4A-203ENST00000372232 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 CLEC19AQ6UXS0 136 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 BRD3OSQ6XYD6 125 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 MOB4Q9Y3A3 225 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 LRRK2Q5S007 2527 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 SPG11Q96JI7 2443 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 ABCA2Q9BZC7 2435 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 CLPSL1A2RUU4 121 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 DNAL4O96015 105 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 IGFL4Q6B9Z1 124 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 WWC2-AS2Q96NR7 200 aa6.44□□□□□ -1.38
ATG4A-203ENST00000372232 CELSR2Q9HCU4 2923 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 TRAV12-3A0A0B4J271 114 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 CD164Q04900 197 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 CIRBPQ14011 172 aaKnown RBP6.43□□□□□ -1.38
ATG4A-203ENST00000372232 GPHB5Q86YW7 130 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 RETNQ9HD89 108 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 LINC00846Q9NV44 126 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 LINC00474Q9P2X8 69 aa6.43□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV4-30-2A0A087WSY4 118 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 CCKP06307 115 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV4-38-2P0DP08 117 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 RPL39P62891 51 aaKnown RBP6.42□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV3-64A0A075B6Q5 118 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV3-66A0A0C4DH42 116 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 BCE1O60756 84 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 TIMM17BO60830 172 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 KLKP1Q107X0 134 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 Q6ZRU5 148 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
ATG4A-203ENST00000372232 TRBV7-6A0A0J9YX20 115 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 Q8N2B8 174 aa6.41□□□□□ -1.38
ATG4A-203ENST00000372232 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms